CV884899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_ANATD (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=panB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.434e-28 Identity = 63/142 (44.37%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 +++A I VMGH+GLTPQ++++ GG+ + K A K+VE A L++ G F++VLE +L +P IGIGAGP+C GQVLV +D+LGM + PKF K++A VG++I A Y EEV G FPG HS Sbjct: 127 VIKAQIPVMGHLGLTPQSVNIFGGYDLRAKEEAEAKKLVEDAKKLEKAGVFAIVLEKVPSHVAKEVQRSLNVPVIGIGAGPYCDGQVLVCYDMLGM-----YEDFKPKFVKRYAEVGNMIKDAVTRYIEEVKKGEFPGKEHS 263
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_LEGPL (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Legionella pneumophila (strain Lens) GN=panB PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.485e-28 Identity = 65/142 (45.77%), Postives = 86/142 (60.56%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 +V AGI VMGH+GLTPQ+I LGG++ QGKN A +++ A L++ GCF+VV+EC T +L IPTIGIGAGP GQVLV+HD+LG+ PKF K++ R D +A Y ++V FP HS Sbjct: 125 LVNAGIPVMGHIGLTPQSIHQLGGYKIQGKNSEQAETLLQQATTLEQAGCFAVVIECVPQDLAKTITDSLVIPTIGIGAGPGTDGQVLVWHDMLGL-----QTSFNPKFVKKYFRAKDHFIEALNSYVQQVQQMHFPANEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_PYRAE (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Pyrobaculum aerophilum GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSH 447 +V+AGI VMGH+GL PQ + LGGF+ G+ K+++ A AL++ G FS+V+E T A+ IPTI IGAGP C GQ+LV HD++G+ + P P F K++A V DVI A +Y EV G FP H Sbjct: 125 LVKAGIPVMGHIGLNPQRVLALGGFKMVGRTEEQRRKLLDDAKALRDAGAFSLVIEFVPASVAKEITEAVDIPTICIGAGPHCDGQILVLHDIIGLTERP------PSFAKRYANVADVIRSAVKQYVNEVKTGQFPSKEH 259
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CAMJR (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Campylobacter jejuni (strain RM1221) GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 I ++GI V+ H+GLTPQA+++LGG+R QGK++ SA K+++ A A+Q+ G +VLEC +S L+IPTIGIG+G +C GQVLVYHDLLG+ + KF K F ++ + +Y++EV +G FP HS Sbjct: 127 ISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQSAQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHDLLGL-----NKDFKAKFVKHFDKIDPQVGVE--KYRDEVKSGIFPSEEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CAMJE (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Campylobacter jejuni GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 I ++GI V+ H+GLTPQA+++LGG+R QGK++ SA K+++ A A+Q+ G +VLEC +S L+IPTIGIG+G +C GQVLVYHDLLG+ + KF K F ++ + +Y++EV +G FP HS Sbjct: 127 ISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQSAQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHDLLGL-----NKDFKAKFVKHFDKIDPQVGVE--KYRDEVKSGIFPSQEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CAMJD (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 64/142 (45.07%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 I ++GI V+ H+GLTPQA+++LGG+R QGK++ SA K+++ A A+Q+ G +VLEC +S L+IPTIGIG+G +C GQVLVYHDLLG+ + KF K F ++ I +Y++EV +G FP HS Sbjct: 127 ISQSGIPVVAHLGLTPQAVNILGGYRIQGKDLQSAQKIIDDAKAVQDSGACMLVLECVPIKLAQKISSILEIPTIGIGSGKYCDGQVLVYHDLLGL-----NKDFKAKFVKHFDKIDPQIGVE--KYRDEVKSGIFPSEEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CAMJ8 (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 I ++GI V+ H+GLTPQA+++LGG+R QGK++ SA K+++ A A+Q+ G +VLEC +S L+IPTIGIG+G +C GQVLVYHDLLG+ + KF K F ++ + +Y++EV +G FP HS Sbjct: 127 ISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQSAQKIIDDAKAVQDAGACMLVLECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHDLLGL-----NKDFKAKFVKHFDKIDPQVGVE--KYRDEVKSGIFPSQEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_BDEBA (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Bdellovibrio bacteriovorus GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 67/144 (46.53%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 R +V++G+ VMGH+GLTPQ+++ LGGF+ QG++ + K++E AL LQ+ G FSVVLEC T+AL+IPTIGIGAG C GQVLV D+LGM Q PKF K + + I A +Y +EV+ FP S Sbjct: 123 RHLVDSGVPVMGHLGLTPQSVNQLGGFKVQGRDEKAQKKILEAALQLQDAGAFSVVLECVPSKLAKEITAALEIPTIGIGAGVDCDGQVLVLQDMLGMNQ-----GFKPKFVKTYLDGFNTIKGALNQYHQEVSTEIFPSEKES 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_ANADF (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=panB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.857e-28 Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 7 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 + R I AG+ VMGH+GLTPQA+ +GG+ QGK+ A +++ A AL+ GC+++VLEC +S L+IPTIGIGAG C GQVLV +DLLGM TPKF K+F +G I+ A Y EV FP +HS Sbjct: 133 VEVIRRIARAGVPVMGHIGLTPQAVHRMGGYVVQGKDSEKAQQLLRDARALELAGCYAIVLECIPAELARIISSQLRIPTIGIGAGLHCDGQVLVLNDLLGM-----DDAFTPKFVKRFGEIGQAISTAVGAYVGEVKRRVFPDDAHS 275
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_THET2 (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=panB PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 7.650e-28 Identity = 62/144 (43.06%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 RG+V AG+ V+GHVGLTPQ S LGG++ QG+ A ++++ ALAL+E G + VVLE T L + T+GIGAGP QVLV+HD++G+ + P+F K++ G +I +A Y +EV G FPG HS Sbjct: 122 RGLVRAGVPVLGHVGLTPQTASQLGGYKLQGRRPEEAERILKGALALEEAGAYGVVLEMVPARLAKEVTERLSVHTVGIGAGPHTDAQVLVFHDVVGL-----YGDFKPRFVKRYLEAGRLIQEALSRYAQEVREGVFPGEEHS 260 The following BLAST results are available for this feature:
BLAST of CV884899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884899 ID=CV884899; Name=CV884899; organism=Citrus sinensis; type=EST; length=823bpback to top |