CV884899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_METS4 (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Methylobacterium sp. (strain 4-46) GN=panB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.650e-28 Identity = 65/150 (43.33%), Postives = 88/150 (58.67%), Query Frame = 1 Query: 1 SRITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 +R+ +V I VMGH+GLTPQ+++ +GGF+ QG+ V A ++VE A L++ GCFS+VLE T AL IPTIGIGAGP C+GQVLV HDLLG++ KF + + ++ Y E+V G FPGP S Sbjct: 131 ARVPVVEALVACEIPVMGHLGLTPQSVNAMGGFKVQGRAVAQARRIVEDAKRLEDAGCFSLVLEGIPAELAARITEALAIPTIGIGAGPHCAGQVLVLHDLLGLLPGR-----KAKFVRTYVDGYGLLQAGLAAYAEDVRAGRFPGPEES 275
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_HYPBU (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=panB PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.650e-28 Identity = 63/140 (45.00%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPG 438 R +V AGI V+ HVGLTPQ +LGG+R GK + A++V+ A+ +E G F+VV+E T L IPTI IG+GP+C GQVLV HDLLG+ P P F K++ + +I +A EY +V NG FPG Sbjct: 128 RALVRAGIPVVAHVGLTPQRYKLLGGYRLAGKTASEAMEVIREAIGAEEAGAFAVVIEFTAWEVAREITRKLSIPTICIGSGPYCDGQVLVIHDLLGLTPTP------PPFAKKYVDLAAIIRRAVSEYASDVRNGRFPG 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CLOD6 (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Clostridium difficile (strain 630) GN=panB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.991e-28 Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 7 ITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 I IV A I VMGH+GLTPQ+++ GGF+ QG +A +++E A +++ G FS+VLE T+++ IPTIGIGAG C GQ+LVY D+LGM PKF KQ+A +GD++ + Y EV G+FP HS Sbjct: 121 IKQIESIVNAQIPVMGHLGLTPQSVNSFGGFKVQGNTSETARQLIEDAKLIEKAGAFSIVLEGVPTKIAEMVTNSISIPTIGIGAGINCDGQILVYQDMLGMF-----GDFVPKFVKQYANIGDIMKDSIKNYILEVNTGAFPQEKHS 263
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_THENN (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=panB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.305e-27 Identity = 65/141 (46.10%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSH 447 +VE+GI VMGH+GLTPQ ++ GG+R QGK S ++ +A L++ G F++VLE T + IPTIGIG+G FC GQVLV+HDLLG+ +P A P+F K++A + + I KA E+K+EV G FP H Sbjct: 123 LVESGIPVMGHIGLTPQFVNRFGGYRVQGKTEKSREYLLRSARELEKRGAFAIVLEMVVEEVAKEITEGISIPTIGIGSGRFCDGQVLVWHDLLGL--NPDFA---PRFSKRYANLYETILKALQEFKKEVKEGIFPSEEH 258
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_NOCFA (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Nocardia farcinica GN=panB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.305e-27 Identity = 65/142 (45.77%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 + AGI VM H+G TPQ+++ LGGFR QG+ A +++ A+A+QE G FSVV+E T L IPTIGIGAGP C QVLV+ D+ G + + T KF K+F +GD + A Y EV G+FPGP HS Sbjct: 147 LTAAGIPVMAHIGFTPQSVNTLGGFRVQGRG-DGAEQLIADAIAVQEAGAFSVVMEMVPAELAGQVTRKLTIPTIGIGAGPDCDAQVLVWQDMAG-----YTSGKTAKFVKRFGDIGDQLRAAAAAYAAEVREGTFPGPEHS 282
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_LEPBJ (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=panB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.305e-27 Identity = 65/140 (46.43%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 31 EAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 + GI VMGH+GLTPQ++ V GG R QGK S+ K++ A+AL E G FS+VLE + + + TIGIGAGP C GQVLV +DLLG+ A PKF K+F+ + ++ A Y EEV +G FPG HS Sbjct: 130 QIGIPVMGHLGLTPQSVHVFGGHRVQGKGEESSAKLLREAVALSESGAFSIVLEMIPAELGKRVSEEVGVLTIGIGAGPDCDGQVLVLNDLLGL-----DANFQPKFLKKFSNLHSIVKDAIESYHEEVRSGEFPGKDHS 264
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_DEHSB (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Dehalococcoides sp. (strain BAV1) GN=panB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.305e-27 Identity = 63/137 (45.99%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFP 435 IV+ GI VMGH+GLTPQ+++ L GF+ QGK + +A+ ++E A AL++ G F++VLE T+ + IPTIGIGAG C GQV V D+LGM PK K++A + +I KA EY EVT G+FP Sbjct: 127 IVDCGIPVMGHIGLTPQSVNQLSGFKVQGKTLATALSLIEDAKALEKAGAFAIVLETMPAELAAIITAGISIPTIGIGAGEECDGQVQVISDMLGMF-----TDFIPKHTKRYADLNGIITKAVSEYAAEVTKGAFP 258
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CENSY (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Cenarchaeum symbiosum GN=panB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.305e-27 Identity = 65/157 (41.40%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 13 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHSPYKMSSSDCNG 483 A RG+ AGI VMGH+GL PQ ++ GG+R QG+ SA+++ E A AL+E G F++VLE T ++ +PTIGIG+G C GQVLV HD+LG+ + + PKF K +A + + A +K EV + FP P +S Y M + + +G Sbjct: 109 AVRGVTGAGIPVMGHIGLLPQTAALSGGYRVQGRTRESALRLAEDAKALEEAGAFAIVLEMVAEEAARMVTKSVGVPTIGIGSGAGCDGQVLVLHDMLGL-----YGRFRPKFAKVYADLSGEVAGAVAGFKAEVESSQFPRPENSFY-MDAGEADG 259
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CAMJJ (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=panB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.305e-27 Identity = 62/142 (43.66%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 I ++GI V+ H+GLTPQA+++LGG+R QGK++ SA K+++ A A+Q+ G +V+EC +S L+IPTIGIG+G +C GQVLVYHDLLG+ + KF K F ++ + +Y++EV +G FP HS Sbjct: 127 ISQSGIPVVAHLGLTPQAVNMLGGYRVQGKDLQSAQKIIDDAKAVQDAGACMLVVECVPVKLAQKISSILEIPTIGIGSGKYCDGQVLVYHDLLGL-----NKDFKAKFVKHFDKIDPQVGVE--KYRDEVKSGIFPSQEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_THESQ (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermotoga sp. (strain RQ2) GN=panB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27 Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 +VE+GI VMGH+GLTPQ ++ GG+R QGK + ++ +A L++ G F++VLE T ++ IPTIGIG+G FC GQVLV+HDLLG+ +P A P+F K++A + +VI KA E++ EV G FP HS Sbjct: 123 LVESGIPVMGHIGLTPQFVNRFGGYRVQGKTEKNREYLLRSARELEKRGAFAIVLELVVEEVAKEITESVSIPTIGIGSGRFCDGQVLVWHDLLGL--NPDFA---PRFSKKYANLYEVILKALQEFRREVKEGLFPTEEHS 259 The following BLAST results are available for this feature:
BLAST of CV884899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884899 ID=CV884899; Name=CV884899; organism=Citrus sinensis; type=EST; length=823bpback to top |