CV884899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_THEMA (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermotoga maritima GN=panB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27 Identity = 65/142 (45.77%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 +VE+GI VMGH+GLTPQ ++ GG+R QGK + ++ +A L++ G F++VLE T ++ IPTIGIG+G FC GQVLV+HDLLG+ +P A P+F K++A + +VI KA E++ EV G FP HS Sbjct: 123 LVESGIPVMGHIGLTPQFVNRFGGYRVQGKTEKNREYLLRSARELEKRGAFAIVLELVVEEVAKEITESVSIPTIGIGSGRFCDGQVLVWHDLLGL--NPDFA---PRFSKKYANLYEVILKALQEFRREVKKGLFPTEEHS 259
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_CHLAD (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=panB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27 Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 1 Query: 10 TAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 T AR +V GI VMGH+G TPQA++ +G R QG+ A +++E ALA+QE G F++VLE T L+IPTIGIGAG CSGQV V+HDLLG+ ++ P+ +++ + VI +A +Y +V G+FPGP HS Sbjct: 122 TIAR-LVHLGIPVMGHIGFTPQAVNQIG-LRVQGRRANEARQLLEDALAVQEAGAFAIVLELVPAELAQAITERLRIPTIGIGAGAGCSGQVQVWHDLLGL-----YSDFVPRHARRYTDLATVIGEALTQYVHDVRTGTFPGPEHS 261
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_BORPD (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=panB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27 Identity = 60/137 (43.80%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 37 GIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSH 447 G+ V+ H+GL PQ ++ +GG++ QG + +++ A ALQE G F++V+EC T ALQIP IGIGA P C GQ+LV D+LGM A+V P+F KQ+A++GD I +A Y ++V G+FP P H Sbjct: 136 GVPVVSHIGLMPQQVNTVGGYKAQGMQADGSERILRDAQALQEAGAFALVVECTAEAVGRRVTEALQIPVIGIGASPACDGQILVTEDMLGM----SGARV-PRFVKQYAQLGDEIGRAAQRYAQDVRAGAFPAPEH 267
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_THET8 (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=panB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.226e-27 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 +G+V AG+ V+GHVGLTPQ S LGG++ QG+ A ++++ ALAL+E G + VVLE T L + T+GIGAGP QVLV+HD++G+ + P+F K++ G +I +A Y +EV G FPG HS Sbjct: 122 QGLVRAGVPVLGHVGLTPQTASQLGGYKLQGRRPEEAERILKGALALEEAGAYGVVLEMVPARLAKEVTERLSVHTVGIGAGPHTDAQVLVFHDVVGL-----YGDFKPRFVKRYLEAGRLIQEALSRYAQEVREGVFPGEEHS 260
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_GEOMG (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=panB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.226e-27 Identity = 64/144 (44.44%), Postives = 85/144 (59.03%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 R IV+ I VM H+GLTPQ+I +GG++ QGK + ++++ A A++E G F+VVLE T L IPTIGIGAGP C GQVLV HD+LG+ + K +PKF K++ +I A Y EV G FP HS Sbjct: 127 RAIVDMDIPVMAHIGLTPQSIHRMGGYKVQGKKEEQSQRLLDDAKAIEEAGAFAVVLEGIPLKLAEKITEELSIPTIGIGAGPHCDGQVLVIHDILGLCE-----KYSPKFVKRYGDANALITSAVSSYIAEVKKGEFPDEGHS 265
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB2_BRAJA (3-methyl-2-oxobutanoate hydroxymethyltransferase 2 OS=Bradyrhizobium japonicum GN=panB2 PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 2.226e-27 Identity = 61/145 (42.07%), Postives = 91/145 (62.76%), Query Frame = 1 Query: 4 RITAARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPG 438 RI R +V+ I VMGH+GLTPQ+++V+GGF+ QG+ +A+++++ A LQE GCF++VLE T +L IPTIGIGAG CSGQVLV+HD+LG+ + PKF + + + +A + ++ G+FPG Sbjct: 127 RIEMVRALVDCDIPVMGHLGLTPQSVNVMGGFKVQGRTTDTALRLLDDAHRLQEAGCFALVLEGIPAELAARATESLTIPTIGIGAGADCSGQVLVFHDVLGLTEGHR-----PKFVRAYTNGFQLFQEALSRWAADIRKGAFPG 266
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_THENV (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=panB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.907e-27 Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 25 IVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSH 447 +V+AGI VMGH+GLTPQ +GGF+ GK K++E A AL++ G FS+VLE T A+ +PTI IG+GP C GQ+LV HD++G+ + P P F K++A V I +A +Y EEV G FP H Sbjct: 124 LVKAGIPVMGHIGLTPQRFLTIGGFKMVGKTEEQRRKILEDAKALRDAGVFSIVLEFVPASLAREVTQAVDVPTICIGSGPHCDGQILVLHDVVGLTERP------PSFAKKYADVAAAIREAVSKYAEEVRKGLFPAREH 258
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_EMENI (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Emericella nidulans GN=panB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.907e-27 Identity = 65/146 (44.52%), Postives = 89/146 (60.96%), Query Frame = 1 Query: 13 AARGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 A + I AGI V+GH+GLTPQ + LGGFR QGK+ T A+K+++ ALA+QE G F +V+E T L +PTIGIGAG CSGQVLV D+ G + PKF KQ+A V + + +Y+EEV + ++P H+ Sbjct: 185 AIKRITTAGIPVVGHIGLTPQRQNALGGFRVQGKSTTDALKLLKDALAVQEAGAFMIVIEAVPPEIASIVTQKLSVPTIGIGAGNGCSGQVLVQIDMTGNFP---PGRFLPKFVKQYANVWNEALQGIQQYREEVKSRAYPAEQHT 327
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_DESPS (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Desulfotalea psychrophila GN=panB PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.907e-27 Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHS 450 + IV+AGI VMGH+GLTPQ +VLGG++ QG+++ +A K+ A L+E G +VLEC T+++ +PT+GIGAG C GQVLV +D+LG+ + K TPKF K +A++ ++ + Y EV G+FP H+ Sbjct: 125 KAIVDAGIPVMGHLGLTPQTAAVLGGYKVQGRDMEAARKLFADAKRLEEAGVCGLVLECIPAGLAEVVTASIAVPTVGIGAGKGCDGQVLVINDMLGLFE-----KFTPKFVKHYAQLAPLVRQGVENYIGEVRAGAFPEAEHT 263
BLAST of CV884899 vs. ExPASy Swiss-Prot
Match: PANB_BACSU (3-methyl-2-oxobutanoate hydroxymethyltransferase OS=Bacillus subtilis GN=panB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.907e-27 Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 19 RGIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVTSAVKVVETALALQEVGCFSVVLECXXXXXXXXXTSALQIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKFCKQFARVGDVINKAPLEYKEEVTNGSFPGPSHSPYKMSSSDCNGFF 489 R + GI V+ H+GLTPQ++ VLGG++ QGK+ SA K++E ++ +E G +VLEC L IP IGIGAG GQVLVYHD++G H + TPKF KQ+ R+ + I A Y ++V + +FP HS ++M+ + +G + Sbjct: 124 RALTLGGIPVVSHLGLTPQSVGVLGGYKVQGKDEQSAKKLIEDSIKCEEAGAMMLVLECVPAELTAKIAETLSIPVIGIGAGVKADGQVLVYHDIIG-----HGVERTPKFVKQYTRIDETIETAISGYVQDVRHRAFPEQKHS-FQMNQTVLDGLY 274 The following BLAST results are available for this feature:
BLAST of CV884899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884899 ID=CV884899; Name=CV884899; organism=Citrus sinensis; type=EST; length=823bpback to top |