CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.640e-28
Identity = 67/203 (33.00%), Postives = 120/203 (59.11%), Query Frame = -1
Query:  260 DLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 865
            D + ++ME ++ + ++  ++K    S  ++  +  +F FAG ETTS +L++T+  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P  ++H DP+ W  +  EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  270 DFIYLMME-AYNKSKDKDSHK--ALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 62/174 (35.63%), Postives = 103/174 (59.20%), Query Frame = -1
Query:  263 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSF 781
            +++ +  +F F G ETTS  L++ +  L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H +PE W  +  EF+PERF++  +K   N   Y PF  GPR CVG  FAL+  K+A   ILQN+SF
Sbjct:    5 ELVAQTTIFIFGGYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFW-PEPEEFRPERFSKK-NKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 66/191 (34.55%), Postives = 110/191 (57.59%), Query Frame = -1
Query:  260 HGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 817
            H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ ++E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W  +  EF+PERF++  +K + +   Y PF +GPR C+G  FA +  K+A T ++QN+SF+
Sbjct:  279 HNNSKDKDSHKALSDMEITAQSIVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQ 467          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C13A5_CAEEL (Putative cytochrome P450 CYP13A5 OS=Caenorhabditis elegans GN=cyp-13A5 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.932e-27
Identity = 60/180 (33.33%), Postives = 113/180 (62.78%), Query Frame = -1
Query:  254 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELS 790
            + +++I +  +F  AG +TT++ L+++  LL++H + Q++ ++EV +   N +  +D ++ LK ++ ++ E LR+YP  +++ +R  +KET +  + +  G  + +    +H DP++WG+DA EF+PER+  G  +    +  Y PF +GPRIC+G   A++E KM  T IL+ Y+FE S
Sbjct:  312 TFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPNPEVTFDQISKLKYMECVVKEALRMYPLASIVHNRKCMKETNVLGVQIEKGTNVQVDTWTLHYDPKVWGEDANEFRPERWESG-DELFYAKGGYLPFGMGPRICIGMRLAMMEKKMLLTHILKKYTFETS 490          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.523e-27
Identity = 71/207 (34.30%), Postives = 114/207 (55.07%), Query Frame = -1
Query:  269 EAANNDLLGILMETSFREIE--EHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNY 880
            E A ND + + +     ++E  E G+      +  DVI  C +F  AG +TT+  L +   LL+KH +  + A++EV  V G+    YD +  LK +  ++ E LRLYP      SR  +K T LG++ +  GV+I   ++ +H+  E+WG++A +F PER+ E    ++++ +S+ PF  GPR CVG    L EAK A   +L+ Y
Sbjct:  274 ENAENDFIDMFLNYYSEQVEDIEFGSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLE---PSSRHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRY 477          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.304e-27
Identity = 67/204 (32.84%), Postives = 116/204 (56.86%), Query Frame = -1
Query:  260 DLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 865
            D L +++++ + +E E H    ++  +   +I     F FAG ETTS +L++T+  L+ H D Q++ ++E+  V  N  P  YD +  ++ + M++ E LRL+P    L R   K+ ++  + +P G  + +P   +H DP+ W  +  EF+PERF++   K + +   Y PF  GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  270 DFLQLMIDSQNSKETESHKALSDLELAAQSII-----FIFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYW-TEPEEFRPERFSK--KKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 465          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 63/192 (32.81%), Postives = 115/192 (59.90%), Query Frame = -1
Query:  260 IEEHGNNKNVGFSMND--VIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNN-KPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 826
            +  H N+K+   +++D  +I +  +F FAG +TTS  L++ + LL+ H D Q++ ++E+     N  +P YD +  ++ + M+L E LRLYP  + L R   ++ ++  + +P G  + +P+  +H DP+ W  +  +F+PERF++  +K + +   + PF  GPR C+G  FAL+  K+A T +LQN+S +
Sbjct:  275 MNSHDNSKDSHKALSDMEIIAQSIIFIFAGYDTTSSTLSFALYLLATHPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYW-PEPEKFRPERFSKE-NKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQ 464          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.341e-27
Identity = 68/213 (31.92%), Postives = 117/213 (54.93%), Query Frame = -1
Query:  260 MKAGEAANNDLLGILMET-SFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 892
            MK  E    D L +++ + +++  E H    +V     +++ +  +F FAG ETTS  L++ + LL+ H D Q++ + E+     N  P  YD L  ++ + M++ E LRLYP    L R    + ++  L +P G  + +P   +H+DP+ W  +  EF+PERF++  ++ + N   Y PF  GPR C+G  FAL+  K+A   +LQN++ +
Sbjct:  261 MKEKEKQRVDFLQLMINSQNYKTKESHKALSDV-----EIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW-PEPEEFRPERFSKK-NQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQ 466          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 75/214 (35.05%), Postives = 117/214 (54.67%), Query Frame = -1
Query:  176 KNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVP--TLHPELGTQLILRKL 805
            K    S  D+  E   F F G +TT+  ++W +  L+ H + Q+R R+E+  + G+     +D L+ +    M + E LRLYPPV  +SR + K  T     +LPAG+ + L +  +H +P++W +   EF P RFA G   +A++  ++ PF+ G R C+G+ FA+ E K+A  + L    FEL+P     PT +P   LH + G  L LRKL
Sbjct:  296 KGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGIILSLSVYSLHHNPQVWPNPE-EFDPSRFAPG---SARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTL--LRFELAPDPSRKPTVIPEVVLHSKNGIHLKLRKL 503          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP3A2_RAT (Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 9.588e-27
Identity = 68/194 (35.05%), Postives = 108/194 (55.67%), Query Frame = -1
Query:  260 IEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 826
            +  H N+K+       S  ++I +  +F FAG ETTS  L++ +  L+ H D Q++ ++E+     +  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  L +P G  + +P   +H DP+ W     EF PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A T +LQN+SF+
Sbjct:  276 LNAHNNSKDEVSHKALSDVEIIAQSVIFIFAGYETTSSTLSFVLYFLATHPDIQKKLQEEIDGALPSKAPPTYDIVMEMEYLDMVLNETLRLYPIGNRLERVCKKDIELDGLFIPKGSVVTIPTYALHHDPQHW-PKPEEFHPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQ 467          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP3AG_MOUSE6.640e-2833.00Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP3AJ_CAPAE1.133e-2735.63Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP341_MOUSE1.133e-2734.55Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
C13A5_CAEEL1.932e-2733.33Putative cytochrome P450 CYP13A5 OS=Caenorhabditis... [more]
C13B1_CAEEL2.523e-2734.30Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
CP3A5_HUMAN4.304e-2732.84Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP3AV_MESAU7.341e-2732.81Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AD_MOUSE7.341e-2731.92Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
CP4AP_PIG9.588e-2735.05Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP3A2_RAT9.588e-2735.05Cytochrome P450 3A2 OS=Rattus norvegicus GN=Cyp3a2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
back to top