CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 51/190 (26.84%), Postives = 89/190 (46.84%), Query Frame = -1
Query:  251 NKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKN-QVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSP 808
            N NV  S + VI      + AG +T +  ++W+++ L  +   Q + ++E+  V G ++ P       L  ++  + E  R   + P T +  + +++T L    +P G  + +    V+ D ELWGD   EF+PERF        K+       F LG R C+G+    +E  +   ++LQ   F +SP
Sbjct:  301 NANVQLSDDKVITIVFDLFGAGFDTITTAISWSLMYLVTNPRIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFT-IPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHDQELWGDPN-EFRPERFLTSSGTLDKHLSEKVILFGLGKRKCIGETIGRLEVFLFLAILLQQMEFNVSP 488          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 53/195 (27.18%), Postives = 90/195 (46.15%), Query Frame = -1
Query:  263 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSF 832
            R+++E   N NV  S   ++      + AG +T S  L+W+++ L  H + QER  QE+    G +  P      +L  ++  + E+LR   + P T +     K+T L    +P    + +    ++ DPELW D +  F P+RF  A+G      +      F +G R C+G+  A  E  +   +I+Q   F
Sbjct:  297 RKLDE---NSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFT-IPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPS-SFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHF 486          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_PLAFE (Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 53/195 (27.18%), Postives = 90/195 (46.15%), Query Frame = -1
Query:  263 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSF 832
            R+++E   N NV  S   ++      + AG +T S  L+W+++ L  H + QER  QE+    G +  P      +L  ++  + E+LR   + P T +     K+T L    +P    + +    ++ DPELW D +  F P+RF  A+G      +      F +G R C+G+  A  E  +   +I+Q   F
Sbjct:  297 RKLDE---NSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFT-IPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPS-SFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHF 486          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_LIZAU (Cytochrome P450 1A1 OS=Liza aurata GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 53/195 (27.18%), Postives = 92/195 (47.18%), Query Frame = -1
Query:  263 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSF 832
            R+++E   N NV  S   V+      + AG +T S  L+W+++ L  + + QER  QE+ +  G +  P     N+L +++  + E+ R   + P T +     K+T L    +P    + +    ++ DPELW + +  F P+RF  A+G      +      F LG R C+G+  A  E  M   +++Q   F
Sbjct:  297 RKLDE---NANVQMSDEKVVGIVNDLFGAGLDTISTALSWSVMYLVAYPEIQERLYQELKENVGLDRTPVLSDRNNLPLLEAFILEIFRHSSFLPFT-IPHCTTKDTSLNGYYIPKDTCVFINQWQINHDPELWKEPS-SFNPDRFLSADGTEVNKVDGEKVMVFGLGKRRCIGEVIARNEVYMFLAILIQKLHF 486          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.138e-11
Identity = 51/169 (30.18%), Postives = 81/169 (47.93%), Query Frame = -1
Query:  260 LFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 760
            +   AG  T++V L W +  L  H D   +AR E+    G ++  +   L+ L  ++ I+ E LRL+P   +L      ++ K+G+  +P G  + +    +H+DP  W DD   FKPERF E   +A K       F LG R C G   A     +A   ++Q + +E
Sbjct:  302 IMVIAGTNTSAVTLEWALSNLLNHPDVISKARDEIDNRVGLDRLIEEADLSELPYLKNIVLETLRLHPATPLLVPHMASEDCKIGSYDMPRGTTLLVNAWAIHRDPNTW-DDPDSFKPERF-EKEEEAQK----LLAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWE 464          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP2CN_RAT (Cytochrome P450 2C23 OS=Rattus norvegicus GN=Cyp2c23 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 57/198 (28.79%), Postives = 96/198 (48.48%), Query Frame = -1
Query:  260 EIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLR---LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEG---ISKAAKNQVSYF-PFALGPRICVGQNFALVEAKMATTMILQNYSFE 829
            +IEE  +N    F + ++       + AG ETTS  L + ++LL K+ + Q +  +E+ +V G ++ P       L     +L+E+ R   L P  + L  AV+++TK  +  +P G  + LPM+       +  D      PE+F  G          +  YF PF+LG R CVG++ A +E  +  T +LQ +S +
Sbjct:  274 KIEEEKDNLKSEFHLENLAVCGSNLFTAGTETTSTTLRFGLLLLMKYPEVQAKVHEELDRVIGRHQPPSMKDKMKLPYTDAVLHEIQRYITLLP--SSLPHAVVQDTKFRDYVIPKGTTV-LPML-----SSVMLDQKEFANPEKFDPGHFLDKNGCFKKTDYFVPFSLGKRACVGESLARMELFLFFTTLLQKFSLK 463          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP27B_HUMAN (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27B1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = -1
Query:  188 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDG---LNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLI 748
            AG +T S  L+W +  LS+H + Q     E+          Y     L+ L +++ ++ EVLRLYP V   SR   K+  +G+  +P    + L      +DP  +  +   F+P R+  EG      +  +  PF  G R C+G+  A +E +MA   IL +  FE+ P     P A P + P+  T L+
Sbjct:  317 AGVDTVSNTLSWALYELSRHPEVQTALHSEITAALSPGSSAYPSATVLSQLPLLKAVVKEVLRLYPVVPGNSRVPDKDIHVGDYIIPKNTLVTLCHYATSRDPAQF-PEPNSFRPARWLGEG---PTPHPFASLPFGFGKRSCMGRRLAELELQMALAQILTH--FEVQPE----PGAAP-VRPKTRTVLV 496          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_RABIT (Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 51/198 (25.76%), Postives = 91/198 (45.96%), Query Frame = -1
Query:  251 IEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF---AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSP 826
            ++    N NV  S    +      + AG +T +  ++W+++ L      Q + ++E+  V G   +P +     L  ++ ++ E  R   + P T +  +  ++T LG   +P G  + +     + DPELWGD    F+PERF   +  + KA   +V  F   LG R C+G+    +E  +    +LQ   F +SP
Sbjct:  295 VDRLDENANVQVSDEKTVGIVLDLFGAGFDTVTTAISWSLMYLVTKPRIQRKIQEELDAVVGRARRPRFSDRPQLPYLEAVIMETFRHTSFLPFT-IPHSTTRDTSLGGFYIPKGRCVFVNQWQNNHDPELWGDPEA-FRPERFLTPSGAVDKALTEKVLLF--GLGKRKCIGETIGRLEVFLFLATLLQQVEFSVSP 488          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 54/200 (27.00%), Postives = 97/200 (48.50%), Query Frame = -1
Query:  251 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF---AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSP 832
            R+++E   N NV  S + VI      + AG +T +  ++W+++ L  +   Q + ++E+  V G ++ P       L  ++  + E  R   + P T +  +  ++T L    +P G  + +    V+ D ELWGD   EF+PERF   +  + K    +V+ F   LG R C+G+     E  +   ++LQ   F++SP
Sbjct:  296 RKLDE---NANVQLSDDKVITIVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFT-IPHSTTRDTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPN-EFRPERFLTPSGTLDKRLSEKVTLF--GLGKRKCIGETIGRSEVFLFLAILLQQIEFKVSP 488          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP17A_PIG (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Sus scrofa GN=CYP17A1 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 51/189 (26.98%), Postives = 91/189 (48.15%), Query Frame = -1
Query:  209 AGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYP--PVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGI-SKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELS-----PSYVHAPTAVPTLHP 748
            AG ET++ ++ W +  L  +   +++ +  + Q  G N+ P     N L +++  + EVLR  P  P  +  RA++ ++ +G  T+     + + +  +H + + W    + F PERF +   ++     +SY PF  GPR CVG+  A  E  + T  +LQ +  EL      P  V  P+ V  + P
Sbjct:  302 AGVETSASVVKWIVAFLLHYPLLRKKIQDAIDQNIGFNRAPSISDRNQLVLLEATIREVLRFRPVSPTLIPHRAII-DSSIGEFTIDKDTDVVVNLWALHHNEKEWHRPDL-FMPERFLDPTGTQLISPSLSYLPFGAGPRSCVGEMLARQELFLFTAGLLQRFDLELPDDGQLPCLVGNPSLVLQIDP 488          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP1A1_RAT1.138e-1126.84Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
CP1A1_PLEPL1.138e-1127.18Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]
CP1A1_PLAFE1.138e-1127.18Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a... [more]
CP1A1_LIZAU1.138e-1127.18Cytochrome P450 1A1 OS=Liza aurata GN=cyp1a1 PE=2 ... [more]
C81D1_ARATH1.138e-1130.18Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
CP2CN_RAT1.486e-1128.79Cytochrome P450 2C23 OS=Rattus norvegicus GN=Cyp2c... [more]
CP27B_HUMAN1.486e-1129.3225-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
CP1A1_RABIT1.486e-1125.76Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CY... [more]
CP1A1_MOUSE1.486e-1127.00Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP17A_PIG1.486e-1126.98Steroid 17-alpha-hydroxylase/17,20 lyase OS=Sus sc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
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