CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP2C3_RABIT (Cytochrome P450 2C3 OS=Oryctolagus cuniculus GN=CYP2C3 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 49/194 (25.26%), Postives = 96/194 (49.48%), Query Frame = -1
Query:  260 EIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPV-TMLSRAVLKETKLGNLTLPAGVQIGLPMI--LVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 829
            ++E+  + K   F+M+++I      + AG +TTS  L + ++LL KH +   + ++E+  V G ++ P       +     +++E+ R    V T L  AV ++ +     +P G  I +P +  +++ D E    +  +F P  F +      K+   + PF+ G R CVG+  A +E  +  T ILQ+++ +
Sbjct:  269 KMEKEKHKKQSEFTMDNLITTIWDVFSAGTDTTSNTLKFALLLLLKHPEITAKVQEEIEHVIGRHRSPCMQDRTRMPYTDAVMHEIQRYVDLVPTSLPHAVTQDIEFNGYLIPKGTDI-IPSLTSVLYDDKEF--PNPEKFDPGHFLDESGNFKKSDY-FMPFSAGKRACVGEGLARMELFLLLTTILQHFTLK 458          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP27B_RAT (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27b1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 54/194 (27.84%), Postives = 88/194 (45.36%), Query Frame = -1
Query:  221 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDY---DGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVP 790
            S+  ++        AG +T S  L+W +  LS+H + Q     E+          +     L+ L +++ ++ EVLRLYP V   SR   ++  +GN  +P    + L      +DP  + +    F P R+  EG    A +  +  PF  G R C+G+  A +E +MA   IL +  FE+ P     P A+P
Sbjct:  296 SVQSIVGNVTELLLAGVDTVSNTLSWALYELSRHPEVQSALHSEITGAVNPGSYAHLQATALSQLPLLKAVIKEVLRLYPVVPGNSRVPDRDICVGNYVIPQDTLVSLCHYATSRDPAQFREPN-SFNPARWLGEG---PAPHPFASLPFGFGKRSCIGRRLAELELQMALAQILTH--FEVLPE----PGALP 479          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP26C_HUMAN (Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 59/230 (25.65%), Postives = 95/230 (41.30%), Query Frame = -1
Query:  176 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQ-------------VFGNNKPDYD----------GLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 790
            SM ++ E      FA   TT+      ++LL +H     + R+E++                G+  P  D           L  L+ V  ++ EVLRL PPV+   R  L+  +L    +P G  +   +   H+   ++      F PERF  A   S+ A ++  Y PF  G R C+GQ  A    ++    +++   +EL+     A   VP +HP  G +L    L
Sbjct:  282 SMQELKESAVELLFAAFFTTASASTSLVLLLLQHPAAIAKIREELVAQGLGRACGCAPGAAGGSEGPPPDCGCEPDLSLAALGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFELDGYQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPERFGAAREDSRGASSRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWELATPAFPAMQTVPIVHPVDGLRLFFHPL 511          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A3_ONCMY (Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1a3 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 51/201 (25.37%), Postives = 91/201 (45.27%), Query Frame = -1
Query:  245 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGN-NKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSY 832
            R+++E   N N+  S   ++      + AG +T S  L+W +V L  + + QER  QE+ +  G    P      +L +++  + E+ R   + P T +    +K+T L    +P    + +    V+ DPELW + +  F P+RF  A+G             F +G R C+G+     E  +   ++LQ   F+  P +
Sbjct:  297 RKLDE---NANIQVSDEKIVGIVNDLFGAGFDTISTALSWAVVYLVAYPETQERLHQELKEKVGMIRTPRLSDKINLPLLEAFILEIFRHSSFLPFT-IPHCTIKDTSLNGYFIPKDTCVFINQWQVNHDPELWKEPS-SFNPDRFLSADGTELNKLEGEKVLVFGMGKRRCIGEAIGRNEVYLFLAILLQRLRFQEKPGH 492          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_LIMLI (Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 51/195 (26.15%), Postives = 90/195 (46.15%), Query Frame = -1
Query:  263 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSF 832
            R+++E   N NV  S   ++      + AG +T S  L+W+++ L  H + QER  QE+    G +  P      +L  ++  + E+LR   + P T +     K+T L    +P    + +    ++ DPE+W D +  F P+RF  A+G      +      F +G R C+G+  A  E  +   +++Q   F
Sbjct:  297 RKLDE---NSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFT-IPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPEMWKDPS-SFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAILIQKLHF 486          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP19A_CALJA (Cytochrome P450 19A1 OS=Callithrix jacchus GN=CYP19A1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 48/172 (27.91%), Postives = 81/172 (47.09%), Query Frame = -1
Query:  269 IEECKL-FYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKN-QVSYF-PFALGPRICVGQNFALVEAKMATTMILQNY 775
            + +C L    A  +T SV L + + L++KH + +E   +E+  V G      D +  LK+V+  +YE +R  P V ++ R  L++  +    +  G  I L +  +H+         +EF P+     +   AKN    YF PF  GPR C G+  A+V  K     +L+ +
Sbjct:  296 VNQCMLEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIMKEIQTVVGERDVKIDDIQKLKVVENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR---------LEFFPKPNEFTLENFAKNVPYRYFQPFGFGPRSCAGKYIAMVMMKSILVTLLRRF 458          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP10_LYMST (Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 51/175 (29.14%), Postives = 83/175 (47.43%), Query Frame = -1
Query:  239 AGQETTSVLLNWTMVLLSKHQDWQERARQEVL--QVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAE---GISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVH 748
            A  ETTS    W +  L+K+   QE+  QE+   Q   N     + L  L +V+ ++ E LRLYP     SR + ++ +LG  T+PAG  +   +  +++DP L+  +     PER+         A     S   +  G R+C+G+  A  E  +  + I+QN++     SY H
Sbjct:  351 AAVETTSSATVWCLYNLAKNPQVQEKLFQEITEAQAKNNGTISAEDLCKLPMVKAVVKETLRLYPITYSTSRNIAEDMELGGYTIPAGTHVQANLYGMYRDPSLF-PEPEGILPERWLRMNGSQMDATIKSTSQLVWGHGARMCLGRRIAEQEMHITLSKIIQNFTL----SYNH 520          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 51/173 (29.48%), Postives = 83/173 (47.98%), Query Frame = -1
Query:  248 GQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDY---DGLNHLKIVQMILYEVLRLYPPVTMLS-RAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA---EGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPS 745
            G ++T+V L W + LL ++     +A++E+    G  K +Y     ++ L  +Q I+ E LRLYPP    S R   +   LG   +  G ++   +  +H+DP +W  D +EFKPERF    + +     N     PF  G R+C G +  L         +L ++   L+PS
Sbjct:  324 GTDSTAVTLTWALSLLLRNPLALGKAKEEIDMQIG--KDEYIRESDISKLVYLQAIVKETLRLYPPAPFSSPREFTENCILGGYHIKKGTRLIHNLWKIHRDPSVW-SDPLEFKPERFLTTHKDVDLRGHN-FELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDI-LNPS 491          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 57/215 (26.51%), Postives = 96/215 (44.65%), Query Frame = -1
Query:  257 AANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEV-LQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG---NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGIS--KAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFEL 877
            A N D + +L+      +E H N      + +D++       F G +TT+++  W M  + ++   Q R R EV   V G+  P    +  +  +Q ++ E LR +PP  +LS A L    +G    + +PAG    + M  +  D E+W D    F PERF  +EG +        +   PF  G R+C G+N  L    +    ++  + + L
Sbjct:  317 ADNADFVDVLLS-----LEAHEN-----LAEDDMVAVLWEMIFRGTDTTALVTEWCMAEVVRNPAVQARLRAEVDAAVGGDGCPSDGDVARMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEA-FAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFL 520          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 52/231 (22.51%), Postives = 102/231 (44.16%), Query Frame = -1
Query:  176 LMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-----DYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 850
            ++++    I + G + ++   ++ +       + AG +T ++ + W M  L K+    ++ + E+ +  G+NK      D D + +LK   M++ E  RL+P   + L R  +   K+    +P   +I + +  + +DP+LW +   EF PERF +             PF  G RIC G    +   ++    +L  + ++L     H          E GT  I++K+
Sbjct:  270 IIDSMLDAIHKEGKDSSLELIIDHIKGFLANIFLAGIDTGALTMIWAMTELVKNPKLIKKVQGEIREQLGSNKARITEEDIDKVPYLK---MVIKETFRLHPAAPLILPRETMAHIKVQGYDIPPKRRILVNVSAIGRDPKLWTNPE-EFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHKDIDT----EEAGTLTIVKKV 492          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2C3_RABIT3.311e-1125.26Cytochrome P450 2C3 OS=Oryctolagus cuniculus GN=CY... [more]
CP27B_RAT3.311e-1127.8425-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]
CP26C_HUMAN3.311e-1125.65Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE... [more]
CP1A3_ONCMY3.311e-1125.37Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1... [more]
CP1A1_LIMLI3.311e-1126.15Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 P... [more]
CP19A_CALJA3.311e-1127.91Cytochrome P450 19A1 OS=Callithrix jacchus GN=CYP1... [more]
CP10_LYMST3.311e-1129.14Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 P... [more]
C82A3_SOYBN3.311e-1129.48Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C78AB_ORYSJ3.311e-1126.51Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C71BK_ARATH3.311e-1122.51Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
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