CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:65..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: C12C1_DROME (Probable cytochrome P450 12c1, mitochondrial OS=Drosophila melanogaster GN=Cyp12c1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11
Identity = 45/176 (25.57%), Postives = 88/176 (50.00%), Query Frame = -1
Query:  248 GQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDY--DGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--------AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPS 745
            G +TTS  ++  ++ L+K+ + Q+R R+EVL    +   ++  + +  L  ++ ++ E LRLYP     +R+   +  L    +P G ++ +    + +D  L+   A EF PER+        ++ +     N   Y PF  GPR+CVG+    +E ++    +++N+  E + S
Sbjct:  324 GVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLY-PRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYS 498          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 42/162 (25.93%), Postives = 79/162 (48.77%), Query Frame = -1
Query:  257 ETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLS-RAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFEL 739
            +TT V   W +  L+KH   Q+R  +E+  V G  K   + L+ +  +  + +E LR Y P  ++  R   ++T++G   +PAG +I + +   + D + W +   ++ PERF +       +      F  G R+C G   A + A +A   ++Q + ++L
Sbjct:  319 DTTLVTTEWAIYELAKHPSVQDRLCKEIQNVCGGEKFKEEQLSQVPYLNGVFHETLRKYSPAPLVPIRYAHEDTQIGGYHVPAGSEIAINIYGCNMDKKRW-ERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKL 479          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP6B1_PAPPO (Cytochrome P450 6B1 OS=Papilio polyxenes GN=CYP6B1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 53/211 (25.12%), Postives = 98/211 (46.45%), Query Frame = -1
Query:  254 DLLGILMETSFREIEEHGNNKNV-GFSMNDVIEECKLF--YFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD--YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLG--NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELS 865
            DL+  L E    E+     N++V    + D +   ++F  Y AG ET++  + +    L+K+ D Q++   E+ +V   +  +  Y+ L+ +  +  +  E LR YP      R    +      ++T+  G  I +    +  DP+ + +   +F PERF     K  ++  +Y PF+ GPR C+G  FA  ++++    +L  Y  E S
Sbjct:  261 DLIQELREKKTLELSRKHENEDVKALELTDGVISAQMFIFYMAGYETSATTMTYLFYELAKNPDIQDKLIAEIDEVLSRHDGNITYECLSEMTYLSKVFDETLRKYPVADFTQRNAKTDYVFPGTDITIKKGQTIIVSTWGIQNDPKYYPNPE-KFDPERFNPENVKD-RHPCAYLPFSAGPRNCLGMRFAKWQSEVCIMKVLSKYRVEPS 469          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP51_SORBI (Obtusifoliol 14-alpha demethylase OS=Sorghum bicolor GN=CYP51 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 50/173 (28.90%), Postives = 83/173 (47.98%), Query Frame = -1
Query:  257 FAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNN--KPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE----TKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISK-AAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFEL 751
            FAGQ T+S+   WT   + + + +   A +E   V   +  K D+D L  + ++   + E LRL+PP+ ML R    +    TK G    +P G  +       ++ P ++ +    + P+RF  G  +  A    SY  F  G   C+G+ FA ++ K   T +L+N+ FEL
Sbjct:  288 FAGQHTSSITSTWTGAYMLRFKQYFAEAVEEQKDVMKRHGDKIDHDILAEMDVLYRCIKEALRLHPPLIMLLRQSHSDFTVTTKEGKEYDIPKGHIVATSPSFANRLPHIYKNPD-SYDPDRFGPGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFEFEL 459          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP2CL_CANFA (Cytochrome P450 2C21 (Fragment) OS=Canis familiaris GN=CYP2C21 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 50/192 (26.04%), Postives = 94/192 (48.96%), Query Frame = -1
Query:  260 EIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPV-TMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 829
            +IE+  +NK   F+M+++I      + AG ETTS  L + +++L KH D   + ++E+ +V G ++ P     + +     +++E+ R    V   L  +V ++ K     +P G  I   +  V  D E    +  +F P  F +      K+   +  F+ G R+CVG+  A +E  +  T ILQ+++ +
Sbjct:  267 KIEKEKHNKQSEFTMDNLIITIWDVFSAGTETTSTTLRYGLLVLLKHPDVTAKVQEEIHRVVGRHRSPCMQDRSCMPYTDAVVHEIQRYIDLVPNNLPHSVTQDIKFREYLIPKGTTILTSLTSVLHD-EKGFPNPDQFDPGHFLDENGSFKKSDY-FMAFSAGKRVCVGEGLARMELFLLLTNILQHFTLK 456          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP2C2_RABIT (Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CYP2C2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 46/191 (24.08%), Postives = 90/191 (47.12%), Query Frame = -1
Query:  266 EIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPV-TMLSRAVLKETKLGNLTLPAGVQIGLPM-ILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYS 829
            ++E+   N+   F++ +++      + AG ETTS  L + ++LL KH +   + ++E+ +V G ++ P     + +      ++E+ R    +   +    +   K  N  +P G  +   +  ++H D E    D   F P  F +      K+   + PF+ G R+CVG+  A +E  +  T ILQN++
Sbjct:  270 KMEQEKCNQQSEFTIENLLTTVSDVFMAGTETTSTTLRYGLLLLMKHPEVIAKVQEEIERVIGRHRSPCMQDRSRMPYTDATVHEIQRYINLIPNNVPHTTICNLKFRNYLIPKGTDVLTSLSSVLHDDKEFPNPD--RFDPGHFLDASGNFRKSDY-FMPFSTGKRVCVGEALARMELFLFLTAILQNFT 457          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP238_MOUSE (Cytochrome P450 2C38 OS=Mus musculus GN=Cyp2c38 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 49/187 (26.20%), Postives = 88/187 (47.06%), Query Frame = -1
Query:  239 FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPV-TMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVH 793
            +S+ +++      + AG ETTS  L + ++LL K+ D   + ++E+  V G ++ P     +H+     +++EV R    V   L  AV  + K  N  +P G  +   +  V  D + + +  + F P  F +      K+   +  F+ G R+C G+  A +E  +  T ILQN+  +   S VH
Sbjct:  282 YSLENLVCTINNLFAAGTETTSTTLRYALLLLMKYPDVTAKVQEEIDHVVGRHRSPCMQDRSHMPYTDAMIHEVQRFINLVPNNLPHAVTCDIKFRNYIIPKGTTVVTSLTSVLHDSKEFPNPEM-FDPGHFLDANGNFKKSDY-FMTFSAGKRVCAGEGLARMELFLILTTILQNFKLK---SLVH 463          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP21A_HUMAN (Steroid 21-hydroxylase OS=Homo sapiens GN=CYP21A2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 57/193 (29.53%), Postives = 92/193 (47.67%), Query Frame = -1
Query:  182 GQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG----NNKPDYDGLNHLKIVQMILYEVLRLYPPVTM-LSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILR 745
            G ETT+  L+W +V L  H + Q+R ++E+    G    +++  Y     L ++   + EVLRL P V + L     + + +    +P G  I   +   H D  +W +   EF P+RF E      KN  +   F  G R+C+G+  A +E  +  T +LQ  +F L PS      A+P+L P     +IL+
Sbjct:  292 GTETTANTLSWAVVFLLHHPEIQQRLQEELDHELGPGASSSRVPYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSISGYDIPEGTVIIPNLQGAHLDETVW-ERPHEFWPDRFLE----PGKNSRA-LAFGCGARVCLGEPLARLELFVVLTRLLQ--AFTLLPS----GDALPSLQPLPHCSVILK 472          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP1A1_SPAAU (Cytochrome P450 1A1 OS=Sparus aurata GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 53/199 (26.63%), Postives = 89/199 (44.72%), Query Frame = -1
Query:  251 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYDGLNHLKIVQMILYEVLR--LYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF--AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSP 832
            R+++E   N NV  S   V+      + AG +T S  L+W+++ L  + + QER  QE+ +  G +  P       L  ++  + E+ R   + P T +     K+T L    +P    + +    ++ DPELW D +  F P+RF   +G             F LG R C+G+  A  E  +   +++QN  F   P
Sbjct:  297 RKLDE---NSNVQMSDEKVVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIQERLYQEMKESVGLDRTPCLSDKPKLPFLEAFILEIFRHSSFLPFT-IPHCSSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPS-SFNPDRFLNTDGTELNKLEGEKMMVFGLGKRRCIGEVIARNEVFLFLAILVQNLRFHAKP 490          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP19A_LAGAC (Cytochrome P450 19A1 OS=Lagenorhynchus acutus GN=CYP19A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 46/172 (26.74%), Postives = 83/172 (48.26%), Query Frame = -1
Query:  269 IEECKL-FYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKN-QVSYF-PFALGPRICVGQNFALVEAKMATTMILQNY 775
            +++C L    A  +T SV + + + L++KH   +E   +E+  V G      D +  LK+V+  +YE +R  P V ++ R  L++  +    +  G  I L +  +H+         +EF P+     +   A+N    YF PF  GPR C G+  A+V  K+    +L+++
Sbjct:  296 VDQCILEMLIAAPDTMSVSVFFMLFLIAKHPQVEEAIMKEIQTVVGERDIRIDDMQKLKVVENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR---------LEFFPKPNEFTLENFARNVPYRYFQPFGFGPRACAGKYIAMVMMKVTLVTLLRSF 458          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C12C1_DROME7.375e-1125.57Probable cytochrome P450 12c1, mitochondrial OS=Dr... [more]
KO1_ARATH9.632e-1125.93Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
CP6B1_PAPPO9.632e-1125.12Cytochrome P450 6B1 OS=Papilio polyxenes GN=CYP6B1... [more]
CP51_SORBI9.632e-1128.90Obtusifoliol 14-alpha demethylase OS=Sorghum bicol... [more]
CP2CL_CANFA9.632e-1126.04Cytochrome P450 2C21 (Fragment) OS=Canis familiari... [more]
CP2C2_RABIT9.632e-1124.08Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CY... [more]
CP238_MOUSE9.632e-1126.20Cytochrome P450 2C38 OS=Mus musculus GN=Cyp2c38 PE... [more]
CP21A_HUMAN9.632e-1129.53Steroid 21-hydroxylase OS=Homo sapiens GN=CYP21A2 ... [more]
CP1A1_SPAAU9.632e-1126.63Cytochrome P450 1A1 OS=Sparus aurata GN=cyp1a1 PE=... [more]
CP19A_LAGAC9.632e-1126.74Cytochrome P450 19A1 OS=Lagenorhynchus acutus GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
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