CX043266

Overview
NameCX043266
Unique NameCX043266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:65..956. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4F1_RAT (Cytochrome P450 4F1 OS=Rattus norvegicus GN=Cyp4f1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.286e-22
Identity = 61/179 (34.08%), Postives = 100/179 (55.87%), Query Frame = -1
Query:  269 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-AEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNY 790
            S  D+  E   F F G +TT+  L+W +  L+   ++QER RQEV ++  +  P   ++D L  L  + M + E LRL+PPVT++SR   ++  L    T+P G+   + +  +H +P +W D  V + P RF  E I  +  + +++ PF+ GPR C+GQ FA+ E K+A  + L  +
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWILYNLANDPEYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEV-YNPFRFDPENIKDS--SPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 9.286e-22
Identity = 71/240 (29.58%), Postives = 118/240 (49.17%), Query Frame = -1
Query:  176 KAGEAANNDLLGILMETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 889
            KA +  + D L IL+   F ++E+         S  D+  E   F F G +TT+  ++W    L+ H + QER R+EV  + G+     +D L+ +    M + E LRLYPPV  +SR +       +  ++P G+   + +  +H +P  W +  V F P RF+     + ++  +Y PF+ G R C+G+ FA+ E K+A  + L  +     P+ +  P A   L  + G  L L+KL
Sbjct:  279 KARKKRHLDFLDILL---FAKMED-----GKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKV-FDPSRFSPD---SPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMARLVLKSKNGIHLRLKKL 506          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4V3_RAT (Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.213e-21
Identity = 59/190 (31.05%), Postives = 105/190 (55.26%), Query Frame = -1
Query:  260 EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 823
            +E GN      S  D+ EE   F F G +TT+  +NW++ LL  + + Q +  +E+  VFG +++P   + L  LK +  ++ E LR++P V + +R++ ++ ++    +  G +  +    +H+DP  +  D  EF+PERF    S+  ++  +Y PF+ GPR C+GQ FA++E K     IL+ +  E
Sbjct:  308 DEEGNK----LSHEDIREEVDTFMFEGHDTTAAAINWSLYLLGSNPEVQRKVDKELDDVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAGYKISKGTEAVIIPYALHRDPRYF-PDPEEFQPERFFPENSQ-GRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWIE 491          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.213e-21
Identity = 64/214 (29.91%), Postives = 108/214 (50.47%), Query Frame = -1
Query:  176 NNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 811
            +   +  S  D+  E   F F G +TT+  ++W +  ++ +   Q+R R+EV ++ G+     +D L  +  + M + E  RLYPPV  + R + K  T +   +LPAG  I L +  +H++  +W D  V F P RF+   +   ++  ++ PF+ GPR C+GQ FA+ E K+ T + L  + F   PS +        L  + G  L L+ L
Sbjct:  294 DESGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILGDRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEV-FDPLRFSPE-NMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQLILRSKNGIHLYLKPL 505          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 58/191 (30.37%), Postives = 98/191 (51.31%), Query Frame = -1
Query:  251 HGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNH-LKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSP 817
            H  + +  F++++++ +  LF  AG E  +  L++   LL+ H D QER  +EV    G +  P+Y  L   L  + M++ E LR+YPP    +R   ++ ++    +PAG  + + +  +H DPE W +    F PERF    ++  +   +Y PF  GPR C+G    L+  K+    +L  + FE SP
Sbjct:  318 HPTSTSKPFTVDEIVGQAFLFLIAGHEVITNTLSFITYLLATHPDCQERLLKEVDLFMGKHPAPEYHSLQEGLPYLDMVISETLRMYPPAFRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPET-FDPERFT-AEARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKFRFEASP 506          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4F4_RAT (Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 59/182 (32.42%), Postives = 98/182 (53.85%), Query Frame = -1
Query:  269 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKL-GNLTLPAGVQIGLPMILVHQDPELWGD----DAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNY 790
            S  D+  E   F F G +TT+  L+W +  L++H ++QER RQEV ++  + +    ++D L  L  + M + E LRL+PPVT++SR   ++  L     +P GV   + +   H +P +W D    D   F PE   +      ++ +++ PF+ GPR C+GQ FA+ E K+A  + L  +
Sbjct:  314 SDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVRELLRDRESTEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRRCTQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRFDPENIKD------RSPLAFIPFSAGPRNCIGQTFAMNEMKVALALTLLRF 489          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 67/212 (31.60%), Postives = 110/212 (51.89%), Query Frame = -1
Query:  176 NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-EGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 802
            ++  S  D+  E   F F G +TT+  ++W +  ++ + + Q R R+EV ++ G+     +D L  +  + M + E  RLYPPV  + R + K  T +   +LPAG  I + +  +H++  +W D  V F   RF+ E  SK  ++  ++ PF+ GPR C+GQ FA+ E K+ T M L  + F L PS +        L  + G  L L+ L
Sbjct:  297 DIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQHRCREEVREILGDQDFFQWDDLGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEV-FDSLRFSTENASK--RHPFAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSLDPSRLPIKMPQLVLRSKNGFHLHLKPL 505          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.584e-21
Identity = 65/207 (31.40%), Postives = 105/207 (50.72%), Query Frame = -1
Query:  176 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 790
            S  D+  E   F F G +TT+  ++W    L+ H + Q+R R+EV  V G+     +D L+ +    M + E LRLYPPV  + R +       +  +LP G+Q+ L +  +H +P++W +  V F P RFA     + ++  S+ PF+ G R C+G+ FA+ E K+   + L  +     P+ V  P     L  + G  L L+KL
Sbjct:  306 SDKDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEV-FDPSRFAPD---SPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLPDPTKVPIPLPRLVLKSKNGIYLYLKKL 508          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 63/208 (30.29%), Postives = 112/208 (53.85%), Query Frame = -1
Query:  176 FSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 793
            FS  D+  E   F +AG + ++  ++W +  L+ + + Q+R R E+  + G+     ++ L+ +    M + E LRL PP+  +SR + K   L +  +LPAG+ + L +  +H +P +W D  V F P RF +  S+  ++  ++ PF+ GPR C+GQ FA++E K+A  + L  +      +   A ++   L P+ G  L L+KL
Sbjct:  299 FSDADLRSEVNTFMWAGHDASAASISWLLYCLALNPEHQDRCRTEIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKV-FDPLRFTKENSEQ-RHPCAFLPFSSGPRNCIGQQFAMLELKVAIALTLLRFRVAADLTRPPAFSSHTVLRPKHGIYLHLKKL 504          
BLAST of CX043266 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.069e-21
Identity = 64/207 (30.92%), Postives = 105/207 (50.72%), Query Frame = -1
Query:  176 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 790
            S  D+  E   F F G +TT+  ++W    L+ H + Q R R+E+  + G+     ++ L+ +    M + E +RLYPPV  +SR +       +  +LP G  + L +  +H +P +W +  V F P RF  G   +A++  ++ PF+ G R C+G+ FA+ E K+A  + L  +     P+ +  PTA   L    G  L LRKL
Sbjct:  308 SDQDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEAMRLYPPVPAISRDLSSPVTFPDGRSLPKGFTVTLSIYGLHHNPNVWPNPEV-FDPGRFTPG---SARHSHAFLPFSGGARNCIGKQFAMNELKVAVALTLVRFELLPDPTRIPKPTARLVLKSNNGIHLRLRKL 510          
The following BLAST results are available for this feature:
BLAST of CX043266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4F1_RAT9.286e-2234.08Cytochrome P450 4F1 OS=Rattus norvegicus GN=Cyp4f1... [more]
CP4AE_RAT9.286e-2229.58Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4V3_RAT1.213e-2131.05Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3... [more]
CP4B1_MOUSE1.213e-2129.91Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
THAS_MOUSE1.584e-2130.37Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
CP4F4_RAT1.584e-2132.42Cytochrome P450 4F4 OS=Rattus norvegicus GN=Cyp4f4... [more]
CP4B1_HUMAN1.584e-2131.60Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CP4AA_RAT1.584e-2131.40Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4X1_RAT2.069e-2130.29Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP4A5_RABIT2.069e-2130.92Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043266 ID=CX043266; Name=CX043266; organism=Citrus sinensis; type=EST; length=892bp
TTTTTTTTAGCACCAAATATTGTACAATATTATTATAATACAGTACTAAT
GCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAATACATT
AAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTTATAGTT
GCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAATTGGGTA
CCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGACATAGGA
TGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGGCCATTT
TTGCTTCTACTAGAGCAAAATTTTGTCCAACACATATCCTAGGACCCAAT
GCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAATTCCTTC
CGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAAGTTCAG
GATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCAGCGGGT
AATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACTAAGCAT
AGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCTGGACAA
TTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCAAACACT
TGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTTGCTCAA
TAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGCCGGCAA
AGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAACCCAACA
TTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTCCATCAG
TATGCCTAACAAGTCATTATTCGCAGCTTCCCCTGCTTTCAT
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