CV884889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.372e-27 Identity = 61/114 (53.51%), Postives = 81/114 (71.05%), Query Frame = -3 Query: 233 LKLVSALVLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPS-LNLNNAAGLPGACGVSIPYKISTSTDCSKVR 568 LKL + +++CMLVT P++++A I+CG V+GSL C +L GG IP CC+GV+ LN+ ARTT DRQ AC C++ AAR++ S LN AA LPGAC V I Y IS T+C+ VR Sbjct: 5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.088e-26 Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = -3 Query: 236 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 505 +TCGQV G+LA CIGFL+ GG +P CC GV+++ ++RTT DR+ C+CLK AA ++ +N NNA LPG CGV+IPYKISTST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.036e-25 Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = -3 Query: 233 ALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 571 +LKL +VLC+LV PL+ AI+ QV SL PC+G++R P P C G+RSL +AAR DRQ AC C+K A I +N AAGLPG C V IPYKIS S DC +V+ Sbjct: 6 SLKLACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25 Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = -3 Query: 236 AALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 574 A + L++A ++ ML P +A A+ CGQV + PC+ +++ GGP P CCNGVR L+ A+++ DRQT CNCLK AR I +LNLNNAA +P C V++PY IS DCS++ Sbjct: 4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = -3 Query: 236 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 505 ++CG V+ +A CI +LR GP+P CCNGV++L +A TT DR+TAC CL A+++I +N AAGLP CGVSIPYKIS ST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = -3 Query: 236 AALKLVS-ALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 574 AA +LV A+V ML+ + AI+CGQVS +L+PCI + R +G P+ CC+GV+ L AA++T D+Q AC CLK A SI +N+ +G+PG CGVS+P+ IS STDC+KV Sbjct: 5 AATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23 Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = -3 Query: 236 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP---CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 565 K V+A+++ L+ +A A+TCGQV LAPCI + + G + P CC+GVR+LN+AA TT DRQT C CLKQ ++ L + AG+P CGV+IPY IS STDCS+V Sbjct: 8 KYVAAVMVVALLLAAPAASAVTCGQVVSMLAPCIMY--ATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23 Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = -3 Query: 233 AALKLVS-ALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 574 AA +LV A+V ML+ + AI+CGQVS +L+PCI + R +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 5 AATQLVLVAMVAAMLIVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23 Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = -3 Query: 236 AITCGQVSGSLAPCIGFLRSGGPIPMPCC-NGVRSLNAAARTTPDRQTACNC-LKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 508 AI+CGQVS ++ PC+ + R G P C +GVRSLNAAARTT DR+ ACNC LK AA + LN A+ +PG CGV +PY IS S DCS+V Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CV884889 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.813e-23 Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = -3 Query: 233 AALKLVS-ALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 574 AA +LV A+V ML+ + AI+CGQVS +L+PCI + R +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DCSK+R Sbjct: 5 AATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115 The following BLAST results are available for this feature:
BLAST of CV884889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884889 ID=CV884889; Name=CV884889; organism=Citrus sinensis; type=EST; length=645bpback to top |