EY665332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 2.013e-80 Identity = 135/203 (66.50%), Postives = 158/203 (77.83%), Query Frame = 1 Query: 1 QNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDIGTHVIHHLFPQIPHYPYINHLKRQTSP-WKYYREPRNRERNPL 606 QNHGHVENDESW PL E++Y+ L +TR LR+ +P P+LAYP YL RSPGK GSHF+P S LF PSERK + TST CW+ M L+ LSFV GP+ +LK+YGVPY IFVMWLD VTYLHHHGH++KLPWYRGKEWSYLR GLTT+DRDYG F+NIHHDIGTHVIHHLFPQIPHY ++ K +YYREP+ P+ Sbjct: 142 QNHGHVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDIGTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYREPKTSGAIPI 344
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 7.277e-22 Identity = 67/187 (35.83%), Postives = 102/187 (54.55%), Query Frame = 1 Query: 4 NHGHVENDESWHPLSEK----IYRTLDSAT-RFLRFKIPFPLLAYPFYLWSRSPGKT----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVM---GPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDI-GTHVIHHLFPQIPHY 525 N ++NDE + P S+ Y+ L+ R L I F L +P YL++ GK +HFDP S +F ER V+ S + + A+L G+ + G + +YG+P ++ D++TYLHH LP Y EW++LR L+T+DRD+G+ +++ HD+ THV+HHLF IPHY Sbjct: 140 NTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITFTL-GFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDL---GLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIITYLHHT--HLSLPHYDSSEWNWLRGALSTIDRDFGFLNSVLHDVTHTHVMHHLFSYIPHY 320
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 3.737e-18 Identity = 61/184 (33.15%), Postives = 87/184 (47.28%), Query Frame = 1 Query: 4 NHGHVENDESWHPLSEKIYRTL-----DSATRFLRFKIPFPLLAYPFYLWSRSPGKT----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDI-GTHVIHHLFPQIPHY 525 N G +E DE + P + + + R + + F +L +P YL G+ HF PN+ ++ ER + S A+ L + G ++ LYGVP I +L L+TYL H LP Y EW +LR L T+DRDYG + + H+I THV HHLF +PHY Sbjct: 147 NTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHY 327
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.397e-17 Identity = 63/193 (32.64%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 4 NHGHVENDESWHP------------LSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRS------PGKTGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDI-GTHVIHHLFPQIPHY 525 N G +E DE + P L+ + RT+ +F L +P Y W+ + P HF PN+ ++ ER + S A+ L + G ++ LYGVP I +L L+TYL H LP Y EW +LR L T+DRDYG + + H+I THV HHLF +PHY Sbjct: 147 NTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQFT--------LGWPLY-WAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLITYLQHT--HPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHY 328
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.202e-16 Identity = 57/163 (34.97%), Postives = 78/163 (47.85%), Query Frame = 1 Query: 112 LLAYPFYLWSRSPGKT----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWF--HNIHHDIGTHVIHHLFPQIPHY---PYINHLKRQTSPWKYY 573 L +P YL + G+ SHF S +F P D+I S + A L+ S + + + K Y VPY WL L+T+L H + KLP YR W++ R L T+DR +G F H H + THV HHLF Q+P Y HLK+ + Y Sbjct: 210 LFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVY 370
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.570e-16 Identity = 56/163 (34.36%), Postives = 78/163 (47.85%), Query Frame = 1 Query: 112 LLAYPFYLWSRSPGKT----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWF--HNIHHDIGTHVIHHLFPQIPHY---PYINHLKRQTSPWKYY 573 L +P YL + G+ SHF S +F P D+I S + A L+ S + + + K Y +PY WL L+T+L H + KLP YR W++ R L T+DR +G F H H + THV HHLF Q+P Y HLK+ + Y Sbjct: 210 LFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLITFLQH--TDPKLPHYREGAWNFQRGALCTVDRSFGKFLDHMFHGIVHTHVAHHLFSQMPFYHAEEATYHLKKLLGEYYVY 370
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 4.569e-16 Identity = 58/184 (31.52%), Postives = 84/184 (45.65%), Query Frame = 1 Query: 4 NHGHVENDESWHPLSEKIYRTLDSAT-----RFLRFKIPFPLLAYPFYLWSRSPGKT----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNIHHDI-GTHVIHHLFPQIPHY 525 N G +E DE + P + + R L + L +P YL G+ H+DP ++ ER + S A+ L L+ G ++ +YGVP + +L L+T+L H LP Y EW +LR L T+DRDYG + + H+I THV HHLF +PHY Sbjct: 147 NTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTLTL-GWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHT--HPALPHYTSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHY 327
BLAST of EY665332 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.018e-15 Identity = 50/142 (35.21%), Postives = 73/142 (51.41%), Query Frame = 1 Query: 115 LAYPFYLWSRSPGKT----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGVPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRRGLTTLDRDYGWFHNI-HHDIGTHVIHHLFPQIPHY 525 + +P YL G+ SH+ P + ++ ER + S V ++ L ++ + G + LL +YGVP I +L +TYL H LP Y EW +L+ L T+DRDYG + + HH THV HHLF +PHY Sbjct: 192 IGWPMYLAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTITYLQHTHFA--LPHYDSSEWDWLKGALATMDRDYGILNKVFHHITDTHVAHHLFSTMPHY 331 The following BLAST results are available for this feature:
BLAST of EY665332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665332 ID=EY665332; Name=EY665332; organism=Citrus sinensis; type=EST; length=1087bpback to top |