CV884875

Overview
NameCV884875
Unique NameCV884875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.595e-16
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = -1
Query:  752 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 919
            EAISELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ D+AGD+IKEA  + +  + Q
Sbjct:  206 EAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLNDEAGDDIKEAPKEVQKVDEQ 261          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = -1
Query:  767 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ DD  DEIKEAA K +
Sbjct:  207 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKAD 257          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = -1
Query:  773 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASK 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ DD  DEIKEAA K
Sbjct:  207 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPK 255          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14335_ORYSJ (14-3-3-like protein GF14-E OS=Oryza sativa subsp. japonica GN=GF14E PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = -1
Query:  752 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 919
            EAISELDTL EESYKDS+LIMQLLRDNLTLWTSDI++DA +EIKE A K ESG+ Q
Sbjct:  208 EAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDAAEEIKE-APKGESGDGQ 262          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = -1
Query:  767 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 919
            EAI+ELD+LGEESYKDS+LIMQLLRDNLTLWTSD  ++ GDEIKEAASK E
Sbjct:  207 EAIAELDSLGEESYKDSTLIMQLLRDNLTLWTSDNAEEGGDEIKEAASKPE 257          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.554e-16
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ DD  DEIKEA  K +  E
Sbjct:  205 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEATPKPDDNE 258          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.641e-16
Identity = 42/49 (85.71%), Postives = 45/49 (91.84%), Query Frame = -1
Query:  773 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASK 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTSD+ DD GDEIKEAA K
Sbjct:  207 EAIAELDTLEEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEIKEAAPK 255          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.034e-15
Identity = 41/53 (77.36%), Postives = 45/53 (84.91%), Query Frame = -1
Query:  761 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 919
            +AI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD  +D GDEIKEAA     G
Sbjct:  207 DAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIKEAAKPEGEG 259          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.350e-15
Identity = 40/57 (70.18%), Postives = 51/57 (89.47%), Query Frame = -1
Query:  749 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQQ 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ D++ +EIKEAA+ + + E ++
Sbjct:  210 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDESPEEIKEAAAPKPAEEQKE 266          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.350e-15
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = -1
Query:  752 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGETQ 919
            EAISELDTL EESYKDS+LIMQLLRDNLTLWTSDI++D  +EI+E A KR+S E Q
Sbjct:  208 EAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEEIRE-APKRDSSEGQ 262          
The following BLAST results are available for this feature:
BLAST of CV884875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
14335_ARATH1.595e-1675.0014-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]
1433_PEA2.083e-1682.3514-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433A_VICFA2.721e-1685.7114-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
14335_ORYSJ2.721e-1680.3614-3-3-like protein GF14-E OS=Oryza sativa subsp. ... [more]
1433A_HORVU3.554e-1682.3514-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
14336_SOLLC3.554e-1677.7814-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
1433_OENEH4.641e-1685.7114-3-3-like protein OS=Oenothera elata subsp. hook... [more]
14336_ORYSJ1.034e-1577.3614-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14334_ARATH1.350e-1570.1814-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14332_ORYSJ1.350e-1576.7914-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884875 ID=CV884875; Name=CV884875; organism=Citrus sinensis; type=EST; length=919bp
AGCCAAAATATGTTAATAATACAATTAATAATACTGTATAACAATACATA
TGAAAATTTAATTTCATCAAACATTAGAAAAGTAGTACTCACTCACAAAC
AAAATTATTTTATATATAAATCAAACAAAATCATTTCTCCAACCATGACC
ACCAAGACGCAGCCTCCAATCTTCACCGGCACTGGAATCCGGGCTAACCC
CGGCTGCAACCCGTTTAACCCGGCTGCCATTATTAAACGCTGGGCTAGGG
CTCCTCGGAGCCTGGTACGTCGTCGTTGCACCGCCAGAACTAGAAGAATC
ACAGCCGCCTGCAGCTGACCCAAGTACTGAATCTTTCTTTGTTGAAGAGT
TCCAATGCGGTGTAGCATTTGGACTCCTCTGCTGCTGCTTGATATTCATC
ATGCCTTGGCTTCTCACCTTGGCCTTGGCAGACTGTGTTGGCGCCATGTA
GCTTGGGACATTGTGTGAGAATGATGGCTTGTGTTGGGGAGGTATGTATG
AGCTTGAGTCTGATAATTCTCTATTGAACCTTCCCATTTTTGAAACCCAA
ACCAAATACTTCTCATCAATAATTAAATCTAGTTTACAATCTGTTGGAAC
ACATAAACCCTAAGTGCAGCCAACACTCAAGATTATCAGTTCATGAGAAT
ATCCTGCTAAAACAACCCACATGGCATCCATGTAAAATAAAAGCCACAAG
ATAAAAAATACAGATACATATCCTATGAACTGAACTCATTATTCATCACT
GCTGCGTCTCCCCTGATTCACGTTTTGATGCTGCTTCCTTAATCTCATCT
CCAGCATCATCAGTGATATCAGAAGTCCAAAGTGTCAGATTATCTCGGAG
AAGCTGCATAATCAATGAACTGTCCTTGTATGATTCTTCACCCAAGGTAT
CGAGCTCAGAAATGGCCTC
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