CV884875

Overview
NameCV884875
Unique NameCV884875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14335_SOLLC (14-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.143e-14
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = -1
Query:  785 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKE 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ DD  DEIKE
Sbjct:  204 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKE 248          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.950e-14
Identity = 37/46 (80.43%), Postives = 43/46 (93.48%), Query Frame = -1
Query:  782 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEA 919
            EAI+ELDTLGE+SYKDS+LIMQLLRDNLTLWTSD+ DD  +E+KEA
Sbjct:  208 EAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDTAEEVKEA 253          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = -1
Query:  785 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKE 919
            EAI+++DTLGEESYKDS+LIMQLLRDNLTLWTSD+ DD  DEIKE
Sbjct:  203 EAIADVDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKE 247          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433F_TOBAC (14-3-3-like protein F OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.410e-14
Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = -1
Query:  779 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAA 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ D+  +E+KE A
Sbjct:  205 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDEGTEEMKEVA 251          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = -1
Query:  788 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIK 919
            EAISELD+LGEESYKDS+LIMQLL DNLTLWTSD  +D GDEIK
Sbjct:   18 EAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = -1
Query:  782 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEA 919
            EAISELDTL EESYKDS+LIMQLL DNLTLWTSDI++D  +EI+EA
Sbjct:  207 EAISELDTLSEESYKDSTLIMQLLHDNLTLWTSDISEDPAEEIREA 252          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAG-DEIKEAASKRESGE 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTSD+ +D G D IK   SK+E  +
Sbjct:  207 EAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQEQAK 261          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = -1
Query:  761 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESG 919
            EAISELDTL EESYKDS+LIMQLLRDNLTLWTSDI+++ GD+  +     + G
Sbjct:  204 EAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDAHKTNGSAKPG 256          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = -1
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRESGE 919
            EAISELDTL EESYKDS+LIMQLLRDNLTLWTSDI +D G+E K  +++ + G+
Sbjct:  204 EAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPED-GEEQKVDSARADGGD 256          
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433A_TOBAC (14-3-3-like protein A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 37/51 (72.55%), Postives = 41/51 (80.39%), Query Frame = -1
Query:  767 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIKEAASKRE 919
            EAI+EL TLGEESYKDS+LIMQL  DNLTLWTSD+ DD  DEIKE +   E
Sbjct:  203 EAIAELGTLGEESYKDSTLIMQLFCDNLTLWTSDMQDDGTDEIKEPSKAEE 253          
The following BLAST results are available for this feature:
BLAST of CV884875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
14335_SOLLC1.143e-1486.6714-3-3 protein 5 OS=Solanum lycopersicum GN=TFT5 P... [more]
1433_HELAN1.950e-1480.4314-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]
14332_SOLTU3.326e-1482.2214-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
1433F_TOBAC7.410e-1478.7214-3-3-like protein F OS=Nicotiana tabacum PE=2 SV... [more]
1433X_MAIZE1.264e-1384.0914-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]
14332_MAIZE1.264e-1380.4314-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14312_ARATH1.651e-1370.9114-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
14339_ARATH3.678e-1367.9214-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
1433C_SOYBN6.273e-1370.3714-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
1433A_TOBAC6.273e-1372.5514-3-3-like protein A OS=Nicotiana tabacum PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884875 ID=CV884875; Name=CV884875; organism=Citrus sinensis; type=EST; length=919bp
AGCCAAAATATGTTAATAATACAATTAATAATACTGTATAACAATACATA
TGAAAATTTAATTTCATCAAACATTAGAAAAGTAGTACTCACTCACAAAC
AAAATTATTTTATATATAAATCAAACAAAATCATTTCTCCAACCATGACC
ACCAAGACGCAGCCTCCAATCTTCACCGGCACTGGAATCCGGGCTAACCC
CGGCTGCAACCCGTTTAACCCGGCTGCCATTATTAAACGCTGGGCTAGGG
CTCCTCGGAGCCTGGTACGTCGTCGTTGCACCGCCAGAACTAGAAGAATC
ACAGCCGCCTGCAGCTGACCCAAGTACTGAATCTTTCTTTGTTGAAGAGT
TCCAATGCGGTGTAGCATTTGGACTCCTCTGCTGCTGCTTGATATTCATC
ATGCCTTGGCTTCTCACCTTGGCCTTGGCAGACTGTGTTGGCGCCATGTA
GCTTGGGACATTGTGTGAGAATGATGGCTTGTGTTGGGGAGGTATGTATG
AGCTTGAGTCTGATAATTCTCTATTGAACCTTCCCATTTTTGAAACCCAA
ACCAAATACTTCTCATCAATAATTAAATCTAGTTTACAATCTGTTGGAAC
ACATAAACCCTAAGTGCAGCCAACACTCAAGATTATCAGTTCATGAGAAT
ATCCTGCTAAAACAACCCACATGGCATCCATGTAAAATAAAAGCCACAAG
ATAAAAAATACAGATACATATCCTATGAACTGAACTCATTATTCATCACT
GCTGCGTCTCCCCTGATTCACGTTTTGATGCTGCTTCCTTAATCTCATCT
CCAGCATCATCAGTGATATCAGAAGTCCAAAGTGTCAGATTATCTCGGAG
AAGCTGCATAATCAATGAACTGTCCTTGTATGATTCTTCACCCAAGGTAT
CGAGCTCAGAAATGGCCTC
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