CV884875

Overview
NameCV884875
Unique NameCV884875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = -1 
Query:  794 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDE 919
            +AI+ELDTL E+SYKDS+LIMQLLRDNLTLWTSD  DD G E
Sbjct:  203 DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = -1 
Query:  794 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDE 919
            +AI+ELDTL E+SYKDS+LIMQLLRDNLTLWTSD  DD G E
Sbjct:  203 DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGE 244
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = -1 
Query:  809 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITD 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD  D
Sbjct:  211 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQD 247
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = -1 
Query:  758 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGDEIK-EAASKRESGE 919
            EAISELD+L E++YKD +LI+QLLRDNLTLWTSDI +D  +  K +AA+K  +GE
Sbjct:  204 EAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPKGDAANKVGAGE 258
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = -1 
Query:  809 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITD 919
            EAI+ELDTLGEESYKDS+LIMQLLRDNLTLWTSD+ +
Sbjct:  208 EAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQE 244
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -1 
Query:  797 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGD 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTS+   D GD
Sbjct:  151 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433B_RAT (14-3-3 protein beta/alpha OS=Rattus norvegicus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -1 
Query:  797 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGD 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTS+   D GD
Sbjct:  200 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433B_PONAB (14-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -1 
Query:  797 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGD 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTS+   D GD
Sbjct:  200 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433B_MOUSE (14-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -1 
Query:  797 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGD 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTS+   D GD
Sbjct:  200 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
[Close]
BLAST of CV884875 vs. ExPASy Swiss-Prot
Match: 1433B_MACFA (14-3-3 protein beta/alpha OS=Macaca fascicularis GN=YWHAB PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = -1 
Query:  797 EAISELDTLGEESYKDSSLIMQLLRDNLTLWTSDITDDAGD 919
            EAI+ELDTL EESYKDS+LIMQLLRDNLTLWTS+   D GD
Sbjct:  200 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 240
The following BLAST results are available for this feature:
BLAST of CV884875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
1433G_CHICK4.496e-1178.5714-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]
1433G_BOVIN4.496e-1178.5714-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S... [more]
14310_SOLLC4.496e-1189.1914-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
14338_SOLLC5.872e-1163.6414-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
1433D_TOBAC7.668e-1186.4914-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
1433B_SHEEP7.668e-1180.4914-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
1433B_RAT7.668e-1180.4914-3-3 protein beta/alpha OS=Rattus norvegicus GN=... [more]
1433B_PONAB7.668e-1180.4914-3-3 protein beta/alpha OS=Pongo abelii GN=YWHAB... [more]
1433B_MOUSE7.668e-1180.4914-3-3 protein beta/alpha OS=Mus musculus GN=Ywhab... [more]
1433B_MACFA7.668e-1180.4914-3-3 protein beta/alpha OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884875 ID=CV884875; Name=CV884875; organism=Citrus sinensis; type=EST; length=919bp
AGCCAAAATATGTTAATAATACAATTAATAATACTGTATAACAATACATA
TGAAAATTTAATTTCATCAAACATTAGAAAAGTAGTACTCACTCACAAAC
AAAATTATTTTATATATAAATCAAACAAAATCATTTCTCCAACCATGACC
ACCAAGACGCAGCCTCCAATCTTCACCGGCACTGGAATCCGGGCTAACCC
CGGCTGCAACCCGTTTAACCCGGCTGCCATTATTAAACGCTGGGCTAGGG
CTCCTCGGAGCCTGGTACGTCGTCGTTGCACCGCCAGAACTAGAAGAATC
ACAGCCGCCTGCAGCTGACCCAAGTACTGAATCTTTCTTTGTTGAAGAGT
TCCAATGCGGTGTAGCATTTGGACTCCTCTGCTGCTGCTTGATATTCATC
ATGCCTTGGCTTCTCACCTTGGCCTTGGCAGACTGTGTTGGCGCCATGTA
GCTTGGGACATTGTGTGAGAATGATGGCTTGTGTTGGGGAGGTATGTATG
AGCTTGAGTCTGATAATTCTCTATTGAACCTTCCCATTTTTGAAACCCAA
ACCAAATACTTCTCATCAATAATTAAATCTAGTTTACAATCTGTTGGAAC
ACATAAACCCTAAGTGCAGCCAACACTCAAGATTATCAGTTCATGAGAAT
ATCCTGCTAAAACAACCCACATGGCATCCATGTAAAATAAAAGCCACAAG
ATAAAAAATACAGATACATATCCTATGAACTGAACTCATTATTCATCACT
GCTGCGTCTCCCCTGATTCACGTTTTGATGCTGCTTCCTTAATCTCATCT
CCAGCATCATCAGTGATATCAGAAGTCCAAAGTGTCAGATTATCTCGGAG
AAGCTGCATAATCAATGAACTGTCCTTGTATGATTCTTCACCCAAGGTAT
CGAGCTCAGAAATGGCCTC
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