EY665328

Overview
NameEY665328
Unique NameEY665328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1277
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.653e-31
Identity = 59/80 (73.75%), Postives = 70/80 (87.50%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK+ AWDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  205 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKS 284          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.653e-31
Identity = 59/80 (73.75%), Postives = 70/80 (87.50%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  205 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.653e-31
Identity = 59/80 (73.75%), Postives = 70/80 (87.50%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD W+FWVGPFIGA +AA YH  ++RA   K+
Sbjct:  205 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.813e-30
Identity = 58/80 (72.50%), Postives = 70/80 (87.50%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+++NK+  W+D WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  209 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.813e-30
Identity = 60/75 (80.00%), Postives = 67/75 (89.33%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRA 229
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN E AW+D WIFWVGP IGA +AA YHQ I+RA
Sbjct:  206 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.813e-30
Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN+  AW+D WIFWVGPFIGA +AA YH  I+RA   K+
Sbjct:  207 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKS 286          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 5.275e-30
Identity = 58/80 (72.50%), Postives = 68/80 (85.00%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA++YN+  AW D WIFWVGPFIGA +AA YH  ++RA   K+
Sbjct:  207 SHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKS 286          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.175e-29
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARS GAAVIYN+  AW D WIFWVGPFIGA +AA YHQ I+RA   K+
Sbjct:  206 SHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 285          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.937e-28
Identity = 57/80 (71.25%), Postives = 64/80 (80.00%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 244
            +HVP LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IY+    W   WIFWVGPF GA +AA YHQ +LRA   K+
Sbjct:  213 SHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKS 292          
BLAST of EY665328 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.029e-25
Identity = 58/85 (68.24%), Postives = 62/85 (72.94%), Query Frame = 2
Query:    5 THVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVI--YNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGS 253
            +HVPVLAPLPIG AV +VHLATIPITGTGINPARS G A++      KAW   WIFWVGPF GA  A  YH YILR AA KA  S
Sbjct:  188 SHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFAS 272          
The following BLAST results are available for this feature:
BLAST of EY665328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PIP12_ARATH3.653e-3173.75Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA3.653e-3173.75Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH3.653e-3173.75Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP2_PEA1.813e-3072.50Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP1_SOLLC1.813e-3080.00Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_MAIZE1.813e-3073.75Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP13_ORYSJ5.275e-3072.50Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE1.175e-2975.00Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP16_MAIZE4.937e-2871.25Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ1.029e-2568.24Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665328 ID=EY665328; Name=EY665328; organism=Citrus sinensis; type=EST; length=1277bp
GACTACCCATGTTCCGGTCTTGGCACCACTCCCCATTGGGTTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACCGGAACCGGCATCAACCCA
GCTAGGAGTTTTGGAGCTGCTGTGATCTACAACAAGGAGAAAGCCTGGGA
TGACCAATGGATCTTCTGGGTTGGACCATTCATTGGAGCTTTCGTTGCTG
CATTCTACCACCAATACATTCTCAGGGCAGCAGCCATTAAGGCTCTTGGA
TCCTTCAGGAGCAATGCTTAAGCTTTAAATATGATGTCTGGTGCTTCCAA
GGTGAAAAATTTACAGCATGATCAGGAGTGCAAGTCTGTTACGAAGGCCC
TTTAAGAAATCTCTTTTCAAGCTCTTTAGAGGGTCATTGAATTTGAGCTG
AATTAGAAGGCTATTGAATTGTAGATATTTGAACATTATGCTTTTATGCC
TATGCTTTATCTATGTGTAAAGGTGGATTTTGGTATCCAATTTTAATTTT
TTCTTTGGGTGTGTTTAAAATGGGGGGGGGTTTTTTATAATCCTATTTCT
CAAATTTTTCTTAAAAATAAAATAAGGGGGGCCGCCAGGAAGAACCAAGT
TAATTACCCGTCATGGAACGCTATATTCTTCTAAGGGCCCCTAATTCATA
TCATGGGCCGCTTTTAAACTCAAGGACGGGGAAACACGCGGTCACCAACT
TACGCGCTTGACCCCACCCCCTTTCACCCTCGGGGAATAAAAAAAACCCC
CCTAACCCCTCCCAAGTGATGCCCCGGAGTGGAAGGAGATCGCCAGAGCC
ACTAACCCGGGGGGGGAGGGTAAATACAATCACATACTCAACCCACGGCG
CTTCTTCTGCATCACCTTTCCAATCAGCGACGATTCATAGGCAAANTATG
ATATGATGATAATACATTGACACTAACGACATATTTTAGTATTTTATTAC
CTAACATGCTTATTGACTGAATAACATGCCTAGTTTCCAATCCACCAATA
ACGACGTAACTGTTCCCCTAGAATTTCGTTCTGTCGTGAATGATATACAT
AGGCATGTTGACATTCTATAGATTGCGTTATCTTTTAAATTTAATACTAG
AATGATACAAGTTATATAGCGCAGATATATTCATCAATCTACTATCCAGC
AGCACACAGCAACATAGCACACCCGAGCACAATACAAGTGATGTACGACA
ATACAGCTCCCACCAGCACAATCAATTGCTACGTAACACAAAAAATTTAA
CACTTTAAATTACATTACTTTACTCAT
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