CV884704

Overview
NameCV884704
Unique NameCV884704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+   A ++ N   V+ A+HA   SI   W LC   +   ++    SM+  +K LT  G R  +FSGD D  VP TG+      +   +   W PW S  QV G+T+ YE  LTF TI+GAGH VP  +P  AL     FLAGK L
Sbjct:  305 PCTES-YAEIYYNRPDVQRAMHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGGWTEVYE-GLTFATIRGAGHEVPVLQPERALTLLRSFLAGKEL 450          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21
Identity = 58/149 (38.93%), Postives = 79/149 (53.02%), Query Frame = -2
Query:  156 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL----FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKP 590
            PC DD  A ++ N A V+ A+HA       +W +C D IL    +     S++  +K L   G+R  ++SGD D  VP   +      +   I   WRPW    QV+G+ Q YE  LTF T +GAGH VP +KP E+L F+S FL G P
Sbjct:  312 PCLDD-YAKVFYNRADVQKALHATDGVHLKNWTICNDDILNHWNWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQVSGWFQEYEG-LTFATFRGAGHDVPSFKPSESLAFFSAFLNGVP 458          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 55/148 (37.16%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PC  +  A  + N   VR ++HA   ++A  W++C D IL  +     SM+  +  L   G +  ++SGD D  VP  GS     ++G  +  +WR W  N QV G    YE  LTF+T++GAGH VP  KP EAL  +  FL G+ L
Sbjct:  323 PCYSN-YAEEYFNRVDVRLSLHATTRNVA-RWKVCNDSILQTYHFTVSSMLPTYSKLIKAGLKIWVYSGDADGRVPVIGSRYCVEALGISVKSEWRSWFHNHQVGGRITEYEGGLTFVTVRGAGHLVPLNKPEEALALFRSFLNGQEL 468          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 54/148 (36.49%), Postives = 81/148 (54.73%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+   A  + N   V+ A+HA    I   W  C+D ++  ++    +M+  +K L   G R  IFSGD D  VP T +      +   +  +W PW ++ QV G+T+ Y+  LTF T++GAGH VP ++P+ AL  +  FLAGK L
Sbjct:  316 PCTES-YAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYK-GLTFATVRGAGHEVPLFEPKRALILFRSFLAGKEL 461          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20
Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL----FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT++  A ++ N   V+ A+HA   +I   W  C+D +     +     SM+  +K L   G R  ++SGD D  +P T +      +  ++  +W PW S  QV G T+ YE  LTF+T++GAGH VP ++P+ AL     FLAG  L
Sbjct:  313 PCTEN-YAEIYYNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYE-GLTFVTVRGAGHEVPFFQPQSALILLRSFLAGNEL 460          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 51/147 (34.69%), Postives = 79/147 (53.74%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS-MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PC+D  V   +LN   V+ A+HA    +   W+ C+  I   +D+ + +I   K L  +G R  +FSGD D  +P T ++   + +       W PW   G+V GYT+ Y+  LTF T++GAGH VP ++P+ +L  +  FL   PL
Sbjct:  351 PCSDHYVQA-YLNRPEVQAALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVFSGDTDGRIPVTSTKYSLKKMNLTAKTAWHPWYLGGEVGGYTEEYKGKLTFATVRGAGHQVPSFQPKRSLSLFIHFLNDTPL 496          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 82/245 (33.47%), Postives = 122/245 (49.80%), Query Frame = -2
Query:  156 LSEVEKDIA--GLNMYDILEPCYHGNETWEIAAANIRLPSSFRQLGETDRPLPVRIRMFGRAWPLRAPVRDGIVPSWPQ-LLNSNSV-----PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDA---GSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWT-----SNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKP 842
            L EV   +A  GLN+Y++  PC  G            +PS  R   +T     V ++  G  +  R P++      W Q LL S        PCT+   A+ +LND  VR A+H  PE +   W+LC   +  ++         +Y K L+ + YR L+++GD DM   F G E +  S+  K+  + RPW      S  Q+AG+ + + +++ FLTIKGAGH VP  KP+ AL  +SRFL  +P
Sbjct:  259 LQEVSHIVASSGLNIYNLYAPCAGG------------VPSHVRHEKDT-----VVVQDLGNIFT-RLPLKR----VWHQTLLRSGEKVHLDPPCTNTTAASNYLNDPHVRKALHI-PEQLP-RWDLCNFLVNIQYRRLYQSMCSQYLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEF-SHIAFLTIKGAGHMVPTDKPQAALTMFSRFLNRQP 478          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = -2
Query:  153 NSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL-FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSN----GQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 599
            N  PCTD  V   +LN   V+ A+HA    +   W  C+D +  +   A +++   + L     R  ++SGD D  VP T S      +   +  KWRPW S+    G+V GY   Y+ +L+ +T++GAGH VP Y+PR AL     FLAGK L
Sbjct:  355 NFDPCTDYYVEA-YLNRPDVQKALHANVTRLDHPWSACSDVLTRWVDSAKTVLPIIQELMKNSIRVWVYSGDTDGRVPVTSSRLSVNQLQLPVAAKWRPWFSSTKGAGEVGGYIVQYKGDLSLVTVRGAGHEVPSYQPRRALVLVQNFLAGKAL 507          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19
Identity = 55/149 (36.91%), Postives = 83/149 (55.70%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAG-SWELCTDRILFE-HDAG-SMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+ R +T + N   V+ A+HA        +W  C+D I    HDA  SM+  ++ L   G R  +FSGD D  VP T +     ++G      W PW  + +V G++Q Y+  LT ++++GAGH VP ++PR+AL  +  FL GKP+
Sbjct:  290 PCTE-RYSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYK-GLTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPM 436          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 49/148 (33.11%), Postives = 82/148 (55.41%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRI--LFEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PCT+ R + ++ N   V+ A+HA    ++  W+ C+D +   ++    SM+  +K L   G +  +FSGD D  VP T +     ++    +  W PW  +G+V G++Q Y+  LT +T+ GAGH VP ++PR+A   +  FL  KP+
Sbjct:  311 PCTE-RYSNVYFNRLDVQKALHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYK-GLTLVTVAGAGHEVPLHRPRQAFILFRSFLESKPM 456          
The following BLAST results are available for this feature:
BLAST of CV884704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
SCP23_ARATH3.217e-2140.54Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP32_ARATH7.166e-2138.93Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP33_ARATH1.597e-2037.16Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP24_ARATH2.085e-2036.49Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP22_ARATH2.085e-2035.33Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP40_ARATH3.557e-2034.69Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
PPGB_BOVIN3.557e-2033.47Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
CBP23_HORVU7.923e-2036.36Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
CBP2_WHEAT1.035e-1936.91Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP27_ARATH1.765e-1933.11Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010A12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884704 ID=CV884704; Name=CV884704; organism=Citrus sinensis; type=EST; length=846bp
TTGATCATTCTAATCTTAATATAAATTATTGATGTCTCTCATATTCTTTC
AGACACAGATTTTGATGAAGCAAAAGGATGAGTGTAGCAAGACTGCTCTC
TTTCTCAATCAAGCATAATGCACACAAGATCCCAGCTCATAGCACCCTTT
TACAGTGGTTTCCCGGCCAGAAAACGACTGTAAAAATCCAATGCCTCTCG
TGGTTTGTATTCTGGTACTGTATGACCAGCTCCCTTTATGGTTAAAAATG
TGAGGTTGTTTTCATATCCTTGAGTATATCCAGCAACTTGTCCATTGGAA
GTCCAAGGTCTCCATTTATCTACAATCTTATATCCAACCGACCTAGTCCA
TGCTTCACTCCCAGTGAAAGGAACACACATATCATGATCCCCACTGAATA
TGAGTGCCCGATATCCCCTGAGAGTGAGGTTCTTATGGTATTTGATCATG
CTCCCAGCATCATGTTCAAATAAAATCCTGTCTGTACATAATTCCCAACT
TCCAGCAATGCTCTCCGGTTCGGCATGAATTGCTGTCCTAACTGCTGCAT
CATTGAGCCATAGAGTTGCAACTCTATCATCTGTGCATGGCACAGAATTA
CTATTGAGAAGCTGGGGCCAACTTGGAACAATCCCGTCTCTTACAGGAGC
TCTAAGAGGCCAGGCACGACCAAACATCCTTATCCTCACAGGAAGAGGCC
TATCAGTCTCACCCAACTGCCGGAAGCTGGATGGTAACCTAATGTTAGCG
GCTGCAATCTCCCATGTCTCATTGCCATGATAGCACGGCTCTAAAATATC
ATACATGTTTAAACCTGCAATATCCTTCTCAACTTCAGAAAGCTTG
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