CV884704

Overview
NameCV884704
Unique NameCV884704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.546e-15
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = -2
Query:  153 PCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHD----AGSMIKYHKNLTLRGY-RALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 590
            PC    +A  +LN   V+ ++H     +  +W LC +   F  +    + SM+   K L      R  +++GD D  +P T +    + +    V  W PW S GQV G+T+ Y+ N  + T+ GAGH VP YKP+ AL  +  F+   PL
Sbjct:  350 PCGMQYIAA-YLNREDVQRSMHVT--KLPHTWMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRYATVIGAGHEVPLYKPKAALTLFKHFIRNSPL 497          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14
Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = -2
Query:  153 VPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 593
            VPC +D     ++N+  VR AIH  P ++ G W++C+D++   ++     M  + K +     R L++ GD DM   F   + ++  +G +   K  PW  + Q+AG+   ++  L+F+TI+GAGH  P+++  +      +FL   PL
Sbjct:  324 VPCLNDTEMLSYMNNPKVRKAIHI-PFNL-GKWDICSDKVTTTYQKQYTDMTPFIKKIVKNHVRVLLYYGDTDMACNFMMGQQFSDQLGLRRTLKKTPWKYDRQIAGFKTLFD-GLSFITIRGAGHMAPQWRAPQMYYAVQQFLNNHPL 469          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14
Identity = 42/143 (29.37%), Postives = 69/143 (48.25%), Query Frame = -2
Query:  153 LWLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS--MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVG----YKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 563
            L+LN   V+ A+HA    +   W +C+  + +++  G+  M+   K +        +FSGD D  +P  GS    + +     +     +  W   GQV G+   Y N LTF T++GA H VP  +P  AL  ++ F+ G+ L
Sbjct:  327 LYLNLPEVQKALHANRTKLPYEWSMCSSLLNYKYTDGNANMLPILKRIVKSKVPVWVFSGDEDSVIPLLGSRTLVKELADDLNFNTTVPYGAWFDKGQVGGWVVEYGNLLTFATVRGAAHMVPYSQPSRALHLFTSFVLGRKL 469          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13
Identity = 46/142 (32.39%), Postives = 68/142 (47.89%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEHDAGS--MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVG----YKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            + N   V+ A+HA    +  SW +C+  + +    G+  M+   K + L      IFSGD D  VPF GS    R +     +K    +  W    QV G+   Y   LTF T++GA H VP  +P  AL  +S F++G+ L
Sbjct:  322 YFNLPEVQKALHANRTHLPYSWSMCSGVLNYSDIDGNIDMLPILKRIILNKTPIWIFSGDQDSVVPFGGSRTLVRELAQDLNFKTTVPYGAWFHKSQVGGWAIEYGKLLTFATVRGAAHMVPYAQPSRALHLFSSFVSGRRL 463          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.890e-13
Identity = 48/158 (30.38%), Postives = 77/158 (48.73%), Query Frame = -2
Query:  153 CTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILFE---------HDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWT----RSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 587
            C +D     +LN   V+ A+HA    +   W +C++ + ++         +  GS++K        G   L++SGD D  +P TGS        + +G +    +R W +  QV G+TQ Y N L+F T++GA H VP  +P  +L  +  FL G PL
Sbjct:  309 CVEDETVN-YLNRRDVQEALHARLIGVR-EWTVCSNVLDYQLLDVEIPTINIVGSLVK-------AGVPVLVYSGDQDSVIPLTGSRTLVSRLAKQLGLRTSVPYRVWFAGQQVGGWTQVYGNVLSFATVRGASHEVPFSQPERSLVLFKAFLDGHPL 457          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRIL--FEHDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW-TSNGQVAGYTQGYENN-LTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            ++ND  V  + HA     +  W  C+  I   ++    SM+   KNL     R  IFSGD D  +P +G+     ++  K   +W PW  S+G V G++Q YE+  LT+ T++ AGH VP  +PR AL  ++ FLA   L
Sbjct:  319 YMNDPNVHKSFHARLNG-STPWTPCSRVIRKNWKDSPKSMLPIIKNLLQAHLRIWIFSGDSDAVLPLSGTRHSINAMKLKSSKRWYPWYHSHGLVGGWSQVYEDGLLTYTTVRAAGHEVPLSQPRLALFLFTHFLANHSL 457          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAG-SWELCTDRILFE--HDAGSMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPW---TSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            +LN   V+TA+HA    I    W +C++ I  +    A  ++  ++ L   G R  ++SGD D  VP + +     ++   +   W PW    +  +V G++  YE  LT+++  GAGH VP ++P +A   + +FL G+P+
Sbjct:  352 YLNLPEVQTALHANVSGIVEYPWTVCSNTIFDQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEG-LTYVSPSGAGHLVPVHRPAQAFLLFKQFLKGEPM 492          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.730e-12
Identity = 46/142 (32.39%), Postives = 68/142 (47.89%), Query Frame = -2
Query:  153 WLNDAAVRTAIHAEPESIAGSWELCTDRILFEH-DAGS-MIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEA----WTRSVGYKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 560
            +LN   V+ A+HA   ++  SW LC++ + +   D  + M+   K +        IFSGD D  VPF G+          + +K    +  W    QV G+   Y N LTF T++GA H V   +P  AL  +S FL G+ L
Sbjct:  318 YLNIPEVQMALHANRTNLPYSWSLCSNLLNYSAIDVNTNMLPTLKRIIQNKIPVRIFSGDQDSVVPFLGTRTIVGELANDLNFKTTVPYGVWFHKRQVGGWAIEYGNLLTFATVRGAAHAVAYTQPSRALHLFSTFLRGQRL 459          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.355e-11
Identity = 41/133 (30.83%), Postives = 61/133 (45.86%), Query Frame = -2
Query:  153 AIHAEPESIAGSWELCTDRILFEHDAG--SMIKYHKNLTLRGYRALIFSGDHDMCVPFTGSEAWTRSVG----YKIVDKWRPWTSNGQVAGYTQGYENNLTFLTIKGAGHTVPEYKPREALDFYSRFLAGKPL 533
            A+HA    +   W +C++R+ +    G   M+   K +        IFSGD D  +P   S    R +     +K    +  W    QV G+   Y N LTF T++GA H VP  +P  AL  +S F+ G+ L
Sbjct:  298 ALHANRTRLPYEWTMCSNRLNYSGIDGYIDMLPSLKRIIQNQTPVWIFSGDQDSVIPLQSSRTLVRELAEDLNFKTTIPYGAWFHKEQVGGWVTEYGNLLTFATVRGAAHMVPYAEPSRALHMFSSFMNGRRL 430          
BLAST of CV884704 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = -2
Query:  159 PQLLNSNSVPCTDDRVATLWLNDAAVRTAIHAEPESIAGSWELCTDRILF--EHDAGSMIKYHKN-LTLRGYRALIFSGDHDMCVPFTGSEAWTRSVGYKIVDKWRPWTSNGQVAGYTQGYENN-LTFLTIKGAGHTVPEYKPREALDFYSRFLAGK 617
            P++L +  VPC D+   T +LN   VR A+   P S+  +W +C++ I +  +   G M     N +     + ++++GD D+       + +T  +G  +  K   +T  GQ+ GY   Y+ + +TF T++GAGH VP  KP  A      FL  K
Sbjct:  300 PEVLGT--VPCLDESPVTNYLNRQDVRKALGI-PSSLP-AWSICSNAISYGYKRQYGDMTSRVLNAVNNNNLKMMLYNGDVDLACNALMGQRFTDKLGLTLSKKKTHFTVKGQIGGYVTQYKGSQVTFATVRGAGHMVPTDKPAVAEHIIQSFLFNK 452          
The following BLAST results are available for this feature:
BLAST of CV884704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
SCP39_ARATH1.546e-1531.79Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
YUW5_CAEEL2.916e-1429.53Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
SCP44_ARATH4.974e-1429.37Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP42_ARATH1.447e-1332.39Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP45_ARATH1.890e-1330.38Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP28_ARATH4.211e-1335.00Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
HNLS_SORBI9.381e-1329.58P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP41_ARATH2.730e-1232.39Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
SCP43_ARATH1.355e-1130.83Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
YUA6_CAEEL8.781e-1129.94Uncharacterized serine carboxypeptidase F13S12.6 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_010A12_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_010_T7_A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884704 ID=CV884704; Name=CV884704; organism=Citrus sinensis; type=EST; length=846bp
TTGATCATTCTAATCTTAATATAAATTATTGATGTCTCTCATATTCTTTC
AGACACAGATTTTGATGAAGCAAAAGGATGAGTGTAGCAAGACTGCTCTC
TTTCTCAATCAAGCATAATGCACACAAGATCCCAGCTCATAGCACCCTTT
TACAGTGGTTTCCCGGCCAGAAAACGACTGTAAAAATCCAATGCCTCTCG
TGGTTTGTATTCTGGTACTGTATGACCAGCTCCCTTTATGGTTAAAAATG
TGAGGTTGTTTTCATATCCTTGAGTATATCCAGCAACTTGTCCATTGGAA
GTCCAAGGTCTCCATTTATCTACAATCTTATATCCAACCGACCTAGTCCA
TGCTTCACTCCCAGTGAAAGGAACACACATATCATGATCCCCACTGAATA
TGAGTGCCCGATATCCCCTGAGAGTGAGGTTCTTATGGTATTTGATCATG
CTCCCAGCATCATGTTCAAATAAAATCCTGTCTGTACATAATTCCCAACT
TCCAGCAATGCTCTCCGGTTCGGCATGAATTGCTGTCCTAACTGCTGCAT
CATTGAGCCATAGAGTTGCAACTCTATCATCTGTGCATGGCACAGAATTA
CTATTGAGAAGCTGGGGCCAACTTGGAACAATCCCGTCTCTTACAGGAGC
TCTAAGAGGCCAGGCACGACCAAACATCCTTATCCTCACAGGAAGAGGCC
TATCAGTCTCACCCAACTGCCGGAAGCTGGATGGTAACCTAATGTTAGCG
GCTGCAATCTCCCATGTCTCATTGCCATGATAGCACGGCTCTAAAATATC
ATACATGTTTAAACCTGCAATATCCTTCTCAACTTCAGAAAGCTTG
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