CV884653

Overview
NameCV884653
Unique NameCV884653
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV884653 vs. ExPASy Swiss-Prot
Match: RL19_SULSO (50S ribosomal protein L19e OS=Sulfolobus solfataricus GN=rpl19e PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11
Identity = 41/134 (30.60%), Postives = 65/134 (48.51%), Query Frame = -1 
Query:  392 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDG-FIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXRKYRESKKIDKHMYHDMYMKVKGNVFK 790
            M +LK QKRL+AS+   G  ++ +  + + ++  + +R  IR L+KDG  I+ K   I       R K+   K      G RKG + AR  +K              +  R+ K ID+H Y ++Y+K KG  +K
Sbjct:    1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
The following BLAST results are available for this feature:
BLAST of CV884653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RL19_SULSO6.506e-1130.6050S ribosomal protein L19e OS=Sulfolobus solfatari... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008G05_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884653 ID=CV884653; Name=CV884653; organism=Citrus sinensis; type=EST; length=823bp
TAACAGAAACTAAAACGGTTCATATGGTTCCAAATTCAAGGCTTTGTAAG
TAAATAATTTGCCATTAAACAGAAAACAAAATAACTTGGGAAACAAACTC
CTACAAAGAAACCAGAACCAACATTAACATATATAAGTTGTCAATCTTCA
GTCTCCATCATCGATGTATCAGCAATCACTTCTTAGCTTTCCTAGCTCCC
TCAGCCGGTTGGGGTGCTGGTACTGCCTTCTCTCCAGGTCCCTGTGCTAG
TCGCTCTTCTCTCCTGGCCAGCTTTCTCTCCCTGCTGGCCTTGTTCTTGG
CGCGCTTAGCCTCAAACTGGTCAGAAAGAGTCTTCTCTCTTGCCTTCTCA
GCCTTTGACTTGTGGATACTCTCCATGAGGACACGCTTGTTCTTAAATAC
ATTACCCTTGACCTTCATGTACATGTCATGGTACATGTGCTTGTCAATTT
TCTTCGACTCACGGTATTTGCGGAGCAACCGCCTGAGCACACGCATCCTT
CTCATCCAGAGGATTTTGGTGGGAAGCCTCGCCTCCCTAGTACCCTTTCT
CTTACCATATCCAGAGTGACGGCCCTTCCTCTTGGCTTCCTTCATTCTGC
GAGCACGAGAACGGGAGTGGATCTTTGTTGGCTTCCTGATGATGAAACCA
TCCTTCACCAATTTCCTAATGTTCTGCCTGGAGTTGGCCATGGAGATTTC
GTTGACCTCATTAGGGTCAAGCCAGACCTTGCCACGTCCGCACTTGAGGA
CGCTAGCGGAGAGCCGCTTCTGTAACTTCAACGACACCATTTTCTCTTCT
CTTCTCTCCCCCTCTCTCTTCCT
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