CV884642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.901e-23 Identity = 50/103 (48.54%), Postives = 79/103 (76.70%), Query Frame = -1 Query: 497 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAE 805 QV+ALE++FE DNKL+P+RK ++A +L L PRQ+AVWFQNRRAR K+K++ERD+ L++ +DALRL+ + L+++ +AL AE+ +L+ ++ + AV A+ Sbjct: 49 QVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRVDGQMSVKLEAVAAD 151
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = -1 Query: 458 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKL-CQENEETSHAVEAEAPVSEQSKNHVSS 805 QV+ LE++FE +NKLEP+RK +LA LG+ PRQ+AVWFQNRRAR K+K+LE D+ LKA YDAL D++ L +N+ L A++ L KL +E +S + A +Q H + Sbjct: 94 QVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAAQEVDQPDEHTEA 210
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = -1 Query: 458 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKL-CQENEETSHAVEAEAPVSEQSKNHVSS 805 QV+ LE++FE +NKLEP+RK +LA LG+ PRQ+AVWFQNRRAR K+K+LE D+ LKA YDAL D++ L +N+ L A++ L KL +E +S + A +Q H + Sbjct: 94 QVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQDKETSPSSATITTAAQEVDQPDEHTEA 210
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.102e-22 Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = -1 Query: 446 QVKALEKNFEVDN-KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENAN 805 Q+++LE F + KLEP K +LA ELGLQPRQ+A+WFQN+RAR +SK+LE DY L++ YDAL +L+QE ALT +L EL+ +L + E + + A S S N SE + Sbjct: 81 QIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNGGAATTAASSSSCNGSGSEEVD 201
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.102e-22 Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = -1 Query: 446 QVKALEKNFEVDN-KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENAN 805 Q+++LE F + KLEP K +LA ELGLQPRQ+A+WFQN+RAR +SK+LE DY L++ YDAL +L+QE ALT +L EL+ +L + E + + A S S N SE + Sbjct: 81 QIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRSKYDALHSRVESLKQEKLALTVQLHELRERLREREERSGNGGAATTAASSSSCNGSGSEEVD 201
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.779e-21 Identity = 46/98 (46.94%), Postives = 73/98 (74.49%), Query Frame = -1 Query: 512 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSH 805 Q+K+LE FE + +LEP +KV++A ELGLQPRQ+A+WFQN+RAR K+K+LE++Y L+ANY+ L + +++E ++L +EL+ L ++ + EE H Sbjct: 38 QIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHH 135
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.176e-21 Identity = 50/92 (54.35%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 530 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQE 805 Q+K+LE F KLEP +K++LA ELGLQPRQ+A+WFQN+RAR KSK+LER+Y L+ +YDAL Y +L++E AL +L +L A++ QE Sbjct: 38 QIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKL-AEMLQE 128
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.176e-21 Identity = 50/92 (54.35%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 530 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQE 805 Q+K+LE F KLEP +K++LA ELGLQPRQ+A+WFQN+RAR KSK+LER+Y L+ +YDAL Y +L++E AL +L +L A++ QE Sbjct: 38 QIKSLESMFATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLEREYSALRDDYDALLCSYESLKKEKLALIKQLEKL-AEMLQE 128
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.506e-20 Identity = 54/122 (44.26%), Postives = 76/122 (62.30%), Query Frame = -1 Query: 443 QVKALEKNFEVDN-KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANA 805 QV++LE F KLEP K +LA ELGLQPRQ+A+WFQN+RAR +SK++E DY L+A YDAL +L+QE AL A++ EL+ KL E ++ S + + + S NA++ Sbjct: 73 QVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALAAQVDELRGKL-NERQDQSGSCDGGGAEGDDDDKRNSVMNASS 193
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.475e-20 Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = -1 Query: 443 QVKALEKNFEVDN-KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANA 805 QV++LE F KLEP K +LA ELGLQPRQ+A+WFQN+RAR +SK++E DY L+A YDAL +L+QE AL ++ EL+ KL E ++ S + + + S NA++ Sbjct: 72 QVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQIEHDYAALRAQYDALHARVESLRQEKLALADQVDELRGKL-NERQDQSGSCDGGGAEGDDDDKRNSVMNASS 192 The following BLAST results are available for this feature:
BLAST of CV884642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884642 ID=CV884642; Name=CV884642; organism=Citrus sinensis; type=EST; length=811bpback to top |