CV884642
Overview
Analyses
This EST is derived from or has results from the following analyses
Libraries
Homology
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.762e-20 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = -1 Query: 470 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK---------AKLCQENEETS----HAVEAEAPVSEQSKN 811 V QV+ LE++FE NKLEP+RK +LA LGLQPRQ+A+WFQNRRAR K+K+LE+D+ L+ DA R + + L N L AE+ LK C++ + + E EA S +S+N Sbjct: 110 VEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVALKGGAAAAGGGGSSCRQEAASELINLNVKETEASCSNRSEN 236
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSI (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. indica GN=HOX23 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.762e-20 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = -1 Query: 470 VVQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELK---------AKLCQENEETS----HAVEAEAPVSEQSKN 811 V QV+ LE++FE NKLEP+RK +LA LGLQPRQ+A+WFQNRRAR K+K+LE+D+ L+ DA R + + L N L AE+ LK C++ + + E EA S +S+N Sbjct: 110 VEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKTKQLEKDFDALRRQLDAARAENDALLSLNSKLHAEIVALKGGAAAAGGGGSSCRQEAASELINLNVKETEASCSNRSEN 236
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.710e-19 Identity = 49/99 (49.49%), Postives = 71/99 (71.72%), Query Frame = -1 Query: 512 VQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSH 808 +Q++ LE++FE + +LEPDRK+ LAE+LGLQP Q+AVWFQNRRAR K+K+LE D LKA+Y L+ D++ L +N+ L ++++ L N TSH Sbjct: 75 IQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKVQFL-------NRLTSH 166
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.137e-18 Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = -1 Query: 443 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRE---LKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANA 805 Q+ +LE++F+ + KL+ DRKVKL+ ELGLQPRQIAVWFQNRRAR K+K+LE+ Y L+ YD + + L E + L A LR+ +K ++ + S E +S H +EN NA Sbjct: 86 QLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAGTIKVS-GEEDTVEISSVVVAHPRTENMNA 208
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSJ (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. japonica GN=HOX25 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.735e-17 Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = -1 Query: 443 QVKALEKNFEVDN-KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANA 805 QV+ALE++FE + KLEP+RK +LA LG+ PRQ+AVWFQNRRAR K+K+LE D+ L+A +D L L +NE+L +++ L KL + S + AP +EQ+ + E+A + Sbjct: 90 QVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRTALAADNESLRSQVILLTEKLQANGKSPS---PSPAP-AEQTAVPAAPESAKS 207
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX25_ORYSI (Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica GN=HOX25 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.319e-16 Identity = 53/122 (43.44%), Postives = 78/122 (63.93%), Query Frame = -1 Query: 443 QVKALEKNFEVDN-KLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENANA 805 QV+ALE++FE + KLEP+RK +LA LG+ PRQ+AVWFQNRRAR K+K+LE D+ L+A +D L L +NE+L +++ L KL + S + AP +EQ+ + E+A + Sbjct: 30 QVRALERSFEEEKRKLEPERKSELARRLGIAPRQVAVWFQNRRARWKTKQLELDFDRLRAAHDELLAGRAALAADNESLRSQVILLTEKLQANGKSPS---PSPAP-AEQTAVPAAPESAKS 147
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.548e-16 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = -1 Query: 449 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSENA 805 QV LE +F ++KLE RK K+A ELGL PRQ+AVWFQNRRAR K+K+LE +Y LK ++D + L L+ + LT +L E ++++ + S +E S S V + NA Sbjct: 79 QVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSEI----RKLSERLEEMPTNSSSSSLSVEANNA 193
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.488e-15 Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = -1 Query: 485 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVS 805 QV LE +F ++KLE +RK +LA ELGL PRQ+AVWFQNRRAR K+K LE +Y LK ++D + +D L+ E L +L + + ++ Q E + +P+S Sbjct: 64 QVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREI-QRLAERVEGGSSNSPIS 169
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15 Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = -1 Query: 527 QVKALEKNFEVD--------NKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQEN 805 Q+K LE++F+ + KL PDRK+KL++ELGLQPRQIAVWFQNR+AR K+K+LE Y++LR +++ + +E E L EL +LK+ + +++ Sbjct: 79 QLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWKNKQLEH-------LYESLRQEFDIVSREKELLQEELIQLKSMIREDS 172
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.456e-15 Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = -1 Query: 539 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKL 805 QV+ LE +FE D+KLE +RK +LA ELGL PRQ+AVWFQNRRAR K+K +E +Y LK Y+ ++ L E L +L E + ++ Sbjct: 69 QVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREI 157 The following BLAST results are available for this feature:
BLAST of CV884642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884642 ID=CV884642; Name=CV884642; organism=Citrus sinensis; type=EST; length=811bpback to top |