CV884642
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 49/95 (51.58%), Postives = 59/95 (62.11%), Query Frame = -1 Query: 521 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEE 805 QV+ LE +F + KLE RKV LA ELGL P+Q+AVWFQNRRAR KSK LE ++ LK +DA L +L ENE L LK +L EE Sbjct: 70 QVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHL--ENEVL-----RLKERLVVAEEE 157
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.751e-14 Identity = 49/95 (51.58%), Postives = 59/95 (62.11%), Query Frame = -1 Query: 521 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEE 805 QV+ LE +F + KLE RKV LA ELGL P+Q+AVWFQNRRAR KSK LE ++ LK +DA L +L ENE L LK +L EE Sbjct: 70 QVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLKHAHDAAILHKCHL--ENEVL-----RLKERLVVAEEE 157
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = -1 Query: 521 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEE 805 Q + LE +F+ + KLE RKV+LA ELGL +Q+AVWFQNRRAR KSK +E ++ L++ +DA+ L +N L EL +LK +L EE Sbjct: 69 QARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVL-------QNCHLETELLKLKERLADVEEE 156
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.693e-14 Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = -1 Query: 521 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKLCQENEE 805 Q + LE +F+ + KLE RKV+LA ELGL +Q+AVWFQNRRAR KSK +E ++ L++ +DA+ L +N L EL +LK +L EE Sbjct: 69 QARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVL-------QNCHLETELLKLKERLADVEEE 156
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: ATB52_ARATH (Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.783e-13 Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 539 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKAKL 805 QV+ LEK F ++ KLEPD K++L+ +LGL RQ+AVWFQN+RAR K++ LE + L++ ++A D L+ + + L EL+ + +L Sbjct: 19 QVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQL 107
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.278e-11 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = -1 Query: 491 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA-KLCQENEETSHAVEAEAP 805 Q LE F+ N L P +K LA +L L+PRQ+ VWFQNRRAR K K+ E D LLK + L EN L EL+EL+A KL H A P Sbjct: 165 QAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCE-------TLTDENRRLHRELQELRALKLATAAAAPHHLYGARVP 263
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.278e-11 Identity = 45/106 (42.45%), Postives = 54/106 (50.94%), Query Frame = -1 Query: 491 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA-KLCQENEETSHAVEAEAP 805 Q LE F+ N L P +K LA +L L+PRQ+ VWFQNRRAR K K+ E D LLK + L EN L EL+EL+A KL H A P Sbjct: 165 QAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCE-------TLTDENRRLHRELQELRALKLATAAAAPHHLYGARVP 263
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = -1 Query: 545 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA 805 Q LE+ F+ + L P +KV LA+ L L+PRQ+ VWFQNRRAR K K+ E D LK D L D L +E AELR LKA Sbjct: 102 QAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKE----LAELRALKA 184
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11 Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = -1 Query: 545 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA 805 Q LE+ F+ + L P +KV LA+ L L+PRQ+ VWFQNRRAR K K+ E D LK D L D L +E AELR LKA Sbjct: 102 QAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKE----LAELRALKA 184
BLAST of CV884642 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11 Identity = 40/87 (45.98%), Postives = 52/87 (59.77%), Query Frame = -1 Query: 545 QVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDYNNLQQENEALTAELRELKA 805 Q LE+ F+ + L P +KV LA LGL+PRQ+ VWFQNRRAR K K+ E D LK + L + L++E A+LR LKA Sbjct: 123 QAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKE----LADLRALKA 205 The following BLAST results are available for this feature:
BLAST of CV884642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884642 ID=CV884642; Name=CV884642; organism=Citrus sinensis; type=EST; length=811bpback to top |