CV884589

Overview
NameCV884589
Unique NameCV884589
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length827
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.027e-24
Identity = 62/150 (41.33%), Postives = 86/150 (57.33%), Query Frame = 2
Query:   74 YSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEK 523
            Y   +++L++ ++  +   L +  +  R FFE     MR+N+YPPC  P   +G  PH D  +LTIL Q +   GLQ+  D +W  +RP P AF+VNIGD    ++NG++ S  HRAVVN E  R S+A F   K D  V P PS I EK
Sbjct:  188 YCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQ-DHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKP-PSDILEK 335          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.954e-24
Identity = 64/198 (32.32%), Postives = 109/198 (55.05%), Query Frame = 2
Query:   41 LPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVN-SEQERLSIATFHLVKYDGE---VGPAPSLITEKTPALFRRVTTEEFLKAVFSRELHEKSLLDYMRI 622
            LP   RD +  YS +V  L   L   +++ L ++   + +   +    M  +YYPPCP+P   +G + HSD+  LT+LL  ++ EGLQ++++G WF V  +  A I+NIGD+L++ITN  + S+EHR + N + + R+S+A F            GP   L++E+ P  +R  T +++     ++ L   S L + +I
Sbjct:  173 LPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLP-DQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.954e-24
Identity = 67/185 (36.22%), Postives = 103/185 (55.68%), Query Frame = 2
Query:   41 LPPSLRDTLEVYSTEVNALAMNLISRMAKVL-----HIKDEEVREFFENGLQSMRM--NYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVN-SEQERLSIATF---HLVKYDGEVGPAPSLITEKTPALFRRVTTEEF 562
            LP   RD +  YS +V  L   L   +++ L     H+KD E        L+ +RM  +Y+PPCP+P    G + HSD   LT+LL  N  EGLQ+ ++G WF V  +P A I+NIGD+L++ITN  + S++HR + N + + R+S+A F   H+       GP   L++E+ P  +R  T  ++
Sbjct:  173 LPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMEC-------LKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDN-IEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDY 349          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.164e-24
Identity = 53/184 (28.80%), Postives = 104/184 (56.52%), Query Frame = 2
Query:   35 PKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQ---SMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLI---TEKTPALFRRVTTEEFLK 568
            P L    R+ +  ++  +  LA  L+  + + L ++   +++ F          +++ YPPCP+P  + GL  H+D+  + +L Q ++  GLQ+ KD +W  V P+ ++ ++N+GD LEVITNG Y S+ HR +  ++  R+S+A+F+    D  + PAP+L+    E+   ++ +   ++++K
Sbjct:  104 PDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDYMK 287          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.164e-24
Identity = 53/166 (31.93%), Postives = 97/166 (58.43%), Query Frame = 2
Query:   35 PKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQ---SMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEK 523
            P L    R+ +  ++  +  LA  L+  + + L ++   +++ F          +++ YPPCP+P  + GL  H+D+  + +L Q ++  GLQ+ KDG+W  V P+ ++ +VN+GD LEVITNG Y S+ HR +  ++  R+S+A+F+    D  + PAP+L+ ++
Sbjct:  104 PDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKE 269          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.744e-24
Identity = 70/203 (34.48%), Postives = 111/203 (54.68%), Query Frame = 2
Query:   32 FPKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKD-GK-WFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKTPALFRRVTTEEFLKAVFSRELHEKSLLDYMRIEHSQ 634
            +P  P + R+  + YS E+  LA  L+  +++ + +  E + +   +  Q + +N+YP CPQP   +GL  H+D   +T+LLQ ++  GLQ  +D GK W  V+P+  AF+VN+GD   +++NG + + +H+AVVNS   RLSIATF     +  V P      EK P L   +T  E  K   S++L    L    + + SQ
Sbjct:  147 WPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPLSVREGEK-PILEAPITYTEMYKKKMSKDLELARLKKLAKEQQSQ 347          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.744e-24
Identity = 57/182 (31.32%), Postives = 104/182 (57.14%), Query Frame = 2
Query:   41 LPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQ---SMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLI---TEKTPALFRRVTTEEFLK 568
            L    +  ++ ++ E+  LA  ++  + + L ++   +++ F          +++ YPPCP+P  + GL  H+D+  L +L Q ++  GL + KDGKW  V P+ ++ ++N+GD LEVITNG Y S+ HR +   +  R+SIA+F+    D  + PAP+L+    EKT  L+ +   ++++K
Sbjct:  107 LDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEGEQEKT-KLYPKFVFDDYMK 287          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.808e-24
Identity = 55/192 (28.65%), Postives = 107/192 (55.73%), Query Frame = 2
Query:   35 PKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQ---SMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITE-KTPALFRRVTTEEFLKAVFSRELHEK 598
            P L    R  ++ ++ ++  LA  L+  + + L ++   +++ F          +++ YPPCP+P  + GL  H+D+  + +L Q ++  GLQ+ KD +W  V P+ ++ ++N+GD LEVITNG Y S+ HR +  ++  R+SIA+F+    D  + PA +L+ E +T  ++ +   ++++K     +   K
Sbjct:  104 PDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLLKENETSEVYPKFVFDDYMKLYMGLKFQAK 295          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.808e-24
Identity = 57/164 (34.76%), Postives = 97/164 (59.15%), Query Frame = 2
Query:   35 PKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFFENGLQ---SMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQE-RLSIATFHLVKYDGEVGPAPSLI 514
            P L    R  ++ ++ ++  L+  L+  + + L ++   +++ F    +     +++ YPPCP P  V GL  H+D+  + +L Q ++  GLQ+ KDG+W  V P+ ++ +VN+GD LEVITNG Y S+EHR +  ++ E R+SIA+F+    D  + PAP LI
Sbjct:  104 PDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELI 267          
BLAST of CV884589 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.150e-23
Identity = 56/167 (33.53%), Postives = 95/167 (56.89%), Query Frame = 2
Query:   35 PKLPPSLRDTLEVYSTEVNALAMNLISRMAKVLHIKDEEVREFF---ENGLQSMRMNYYPPCPQPGKVMGLTPHSDSVALTILLQINEAEGLQIKKDGKWFPVRPLPNAFIVNIGDMLEVITNGVYPSIEHRAVVNSEQERLSIATFHLVKYDGEVGPAPSLITEKT 526
            P +    R  ++ +   +  LA +L+  + + L ++   +++ F   +      +++ YP CP+P  + GL  H+D+  + +L Q ++  GLQ+ KDG W  V PL ++ ++N+GD LEVITNG Y S+ HR V   E  R+SIA+F+    D E+ PA SL  ++T
Sbjct:  107 PDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET 273          
The following BLAST results are available for this feature:
BLAST of CV884589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAOX2_ARATH3.027e-2441.33Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCH3_ARATH3.954e-2432.321-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH3.954e-2436.221-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO4_PETHY5.164e-2428.801-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_PETHY5.164e-2431.931-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
FL3H_MALDO6.744e-2434.48Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO3_CUCME6.744e-2431.321-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO_PEA8.808e-2428.651-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_ARATH8.808e-2434.761-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO1_BRAJU1.150e-2333.531-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_008D06_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_008_T7_D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884589 ID=CV884589; Name=CV884589; organism=Citrus sinensis; type=EST; length=827bp
ACTCTTCCTGTCCTCTGAGGAACCCCACTTGTTTCCTAAGCTCCCTCCTT
CTCTCAGGGATACGTTGGAAGTTTACTCAACGGAAGTAAATGCTCTAGCG
ATGAATTTAATATCGAGAATGGCAAAAGTCTTACATATCAAGGATGAGGA
AGTGAGAGAATTCTTCGAAAATGGATTGCAATCAATGAGGATGAACTATT
ATCCTCCATGTCCTCAACCGGGGAAAGTTATGGGCCTTACACCCCATTCT
GATAGCGTTGCACTTACCATTCTCCTACAAATCAATGAAGCTGAAGGTCT
CCAGATTAAGAAGGATGGAAAGTGGTTTCCTGTTCGGCCGCTGCCAAATG
CTTTTATTGTCAACATTGGAGACATGCTGGAGGTAATAACGAATGGAGTA
TACCCTAGCATTGAGCATCGTGCAGTAGTAAACTCTGAGCAAGAAAGACT
CTCCATTGCCACTTTTCACTTGGTGAAATATGATGGTGAAGTAGGTCCAG
CACCCAGTTTGATCACTGAGAAAACACCAGCATTGTTCAGAAGAGTGACA
ACTGAAGAGTTCCTCAAGGCCGTCTTCTCTCGTGAGCTTCACGAAAAATC
TCTTTTGGATTACATGAGAATAGAACACAGTCAGGTCTAAGGCCAGTTTA
TTTGAGTTGTGAAAGAGTGAAAGATCTAGTCAAAAAACATCAAATGACAG
GTGCTCTTAAGATCGTGTCAGTATTAGAAAGAAGAAATAAGTTCTACAAA
AACAGTAAGAAGACTGGTAATCCCATGGTCATCGTGTTGATTATGTTTTA
ATGTAACTCAGATTATGTGAAATAAAG
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