EY665295

Overview
NameEY665295
Unique NameEY665295
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECOSE (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain SE11) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLU (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLI (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12) GN=lldD PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECOLC (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECOHS (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O9:H4 (strain HS) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECODH (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / DH10B) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECOBW (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain K12 / BW2952) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO8A (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O8 (strain IAI1) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO5E (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
[Close]
BLAST of EY665295 vs. ExPASy Swiss-Prot
Match: LLDD_ECO57 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O157:H7 GN=lldD PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.220e-15
Identity = 47/158 (29.75%), Postives = 75/158 (47.47%), Query Frame = 1 
Query:   70 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPEGEVATARAAASCNTIMVLSFTXXXXXXXXXXXXXXXRFYQLYVFKKRDITATLVQRAERKGFKALVLPADTPKLGKK 543
            ++++  A+  LP   + +  GGA  E+TL+ NVE    +  R RIL ++S + L TT+ + K+S P+ +AP  L  +    GEV  A+AA +      LS                  ++QLYV + R      ++RA+  G   LV   D P  G +
Sbjct:    7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGAR 164
The following BLAST results are available for this feature:
BLAST of EY665295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
LLDD_ECOSE4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLU4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLI4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOLC4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOHS4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECODH4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOBW4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO8A4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO5E4.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO574.220e-1529.75L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665295 ID=EY665295; Name=EY665295; organism=Citrus sinensis; type=EST; length=962bp
CGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCGGGTTCCAAATGGC
AGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTGGCAAGGCTGGCCC
TTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGCAGAAGATGAACAT
ACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTACGTTTCGGTCAAG
AATTCTTGTCGATGTCAGCAGAATTGATTTATCGACTACCATACTTGATT
ACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGCTTTGCATAAGCTT
GCAAACCCTGAAGGAGAGGTAGCCACAGCCAGAGCAGCAGCTTCATGTAA
CACCATAATGGTTTTATCCTTCACATCTAGCAGCTCCATAGAGGAGGTTG
CGGCCAGCTCCAATGCTGTTCGCTTCTATCAATTATATGTATTCAAGAAA
CGAGATATAACAGCTACTCTAGTGCAAAGAGCTGAAAGGAAGGGTTTTAA
GGCTCTTGTCCTACCGGCTGATACTCCAAAACTTGGGAAAAAGGAGGCAA
ATATAAAAAAAAAAATTGATTTAAACCCCCCCTTTGTAAAACATATGNAN
GGCCNCTNNNNNNNCNNNNNNCNCGCCCNNNNCCCNCNCCCAAATTCNCA
ACCCCCCCCCCCCCCCCCCCCCCCGCNNCCCCCCCCNNNCNNNCNCNNCG
GGNNNCCCAACGGCCCCNNCCCCCCNCCCCCCCCCTCCCCCCTTTTTTTT
CCCCGGGGGTATTCTTTTCCCCCGGGGAAAAAAGGGCAAAAAAAAACCGT
GGGGGGAAAATAAGGGGGGTTGTGGTGGGGGATTTTTTTTGGCCCCCCCA
ATCCCCCGGGGCACCCCCCCCCCAACAGTTTAATTAAATTATTTTCACCC
CCCCCGCCCCCCCTTTTTTTTCTTCTCTCGGCCCCCGTGGGGAAAAAAAA
AGAGGGGTGGGG
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