EY665287

Overview
NameEY665287
Unique NameEY665287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1136
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECOSM (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECOHS (Betaine aldehyde dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECO55 (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECO24 (Betaine aldehyde dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=betB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.643e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.452e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
[Close]
BLAST of EY665287 vs. ExPASy Swiss-Prot
Match: BETB_ECOL6 (Betaine aldehyde dehydrogenase OS=Escherichia coli O6 GN=betB PE=3 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 3.452e-22
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 3 
Query:   57 TKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPAVNCISFTGGDTG----ISISKKAGMIPLHMELGGKNACTVLEDADLDLVA 461
            T +  T + PLGVV  I  +NYP+ +A+ K APAL AGN+++ KP     + AL +   +  AG P G+ + + G G+E G +LT HP +  +SFTGG       ++ S  + +  + MELGGK+   V +DADLDL A
Sbjct:  133 TSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTDHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAA 271
The following BLAST results are available for this feature:
BLAST of EY665287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 475
Match NameE-valueIdentityDescription
BETB_ECOSM2.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLI2.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOHS2.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH2.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E2.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO572.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO552.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO242.643e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLU3.452e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOL63.452e-2240.29Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665287 ID=EY665287; Name=EY665287; organism=Citrus sinensis; type=EST; length=1136bp
AATTCTCGGAGAAGGGAANGTTTTTGGTGTCCCATATCTTCCCCGGAAAT
GAGAGGACTAAGTATTGTCTCACTTCAAAGATTCCACTTGGTGTGGTTTT
GGCCATTCCACCGTTCAACTATCCAGTCAATCTTGCCGTTTCCAAAATTG
CTCCTGCACTGATTGCTGGAAATTCCCTTGTGCTTAAGCCTCCTACTCAG
GGTGCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTT
TCCTAAAGGCCTTATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTG
ATTTCCTTACTATGCATCCTGCAGTGAACTGTATAAGCTTCACTGGTGGA
GACACTGGAATTTCAATCTCGAAGAAAGCTGGTATGATCCCTCTTCATAT
GGAGTTGGGAGGCAAAAATGCTTGTACCGTGCTTGAGGATGCTGACCTTG
ATTTGGTTGCCGCAAACATAATAAAAGGATGAATTTCTTACAGTGGTAAA
AATGCACTGCATTAAAGTGTCTTGGTGAAGAATCTGTACAAATTCCCTGT
CAAAAAGGTAAAGTTAATTGGAAAACTAAAATTGGCCCTCCTAAAAAAAC
TGGTAATCCATCAATTGTGTCAATTTTTGCAATTTCTTGAAGGGTGGTAG
GAAGCCAAACAAAGAAAAACATCTTAAAAAACAAGAAAAAGAACCTCACA
GGCCTTTTCTTAGAAGTGAAAAAAAATAAAACAAGGAGAAAAATTTAAAC
ATTTACCTGAATAATATGATATTTAAGAGATACACAGATAGCACACATTG
AACTAGTATTTATTCAAAGAAATTAAATATGTACAGATATAAAGAAAACT
ACCAAAAGTTCCCCCCTTGATAAAATTTTCTTTAGTGTGTACATACTATG
AATAAAGCAAAAAAACTATTCTAACTTAGACTAGAAAATCAATGCCAATA
CGGTAAAATAATGATTTGACATAGAATGATATTTAATAGAAAATTAGAAA
TAATATCAATAAGTGATATAAATTAAACCTTGATGAATGAAACGAGGAGA
GGACTAATGATGAAATACAAAAAATAATAAACAAAAAGAATAAAAAACCA
TCAAGAACTANCTAATACAATGCCGAACAACACGCA
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