CV884484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.738e-58 Identity = 113/178 (63.48%), Postives = 137/178 (76.97%), Query Frame = -3 Query: 253 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERL 786 L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP +HSR+R R+ A+RKGRH G GKRKGT AR+P K R+YRE+KKIDRHMYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+ RREERL Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREERL 177
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_DANRE (60S ribosomal protein L19 OS=Danio rerio GN=rpl19 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.280e-57 Identity = 107/177 (60.45%), Postives = 135/177 (76.27%), Query Frame = -3 Query: 256 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 786 L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K R+YREAKKIDRHMYH +Y++ KGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R K + +R+R+ R++ + Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRTKTREARKRREERQQAK 180
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 7.301e-57 Identity = 110/178 (61.80%), Postives = 136/178 (76.40%), Query Frame = -3 Query: 253 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERL 786 L+LQKRL++SVL+CG+ KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP +HSR+R R+ A+RKGRH G GKRKGT AR+P K R+YRE+KKIDRHMYH +Y++ KGNVFKNKR+LME IHK KA++AR+K LSDQ EA+R+K + +R+ RREERL Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRSKTREARK----RREERL 177
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_DICDI (60S ribosomal protein L19 OS=Dictyostelium discoideum GN=rpl19 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.522e-54 Identity = 101/174 (58.05%), Postives = 131/174 (75.29%), Query Frame = -3 Query: 268 ALKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIAR 789 +LKLQKRL+AS+LKCG+G+VW+DPNE+ +++MANSR N+R+L+ GFI+RKP +HSRSRAR AKR GRH G G R GTREARLP+K +KYREAKKID+H Y ++Y+K KGNVFKNKR L+E I KSK EK REK + DQ +A+R KNK+ ++R+ A+ Sbjct: 3 SLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNKNKSIKDRRAAK 176
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_CAEEL (60S ribosomal protein L19 OS=Caenorhabditis elegans GN=rpl-19 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.871e-53 Identity = 103/182 (56.59%), Postives = 135/182 (74.18%), Query Frame = -3 Query: 253 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASR----ERKIARREERL 786 L+LQKRL+++VLKCG+ +VWLDPNEV+EIS ANSRQ+IR+LV DG IIRKP +HSR RAR +EA+RKGRH+GYGKR+GT AR+P K R+YR+AKK+D+H+YH++Y++ KGN FKNK+ L+E I K K E R K L+DQ +A+R KNK SR ER++ +R E L Sbjct: 4 LRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKNKESRKRREERQVVKRAELL 185
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19B_SCHPO (60S ribosomal protein L19-B OS=Schizosaccharomyces pombe GN=rpl19b PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.430e-52 Identity = 100/177 (56.50%), Postives = 131/177 (74.01%), Query Frame = -3 Query: 256 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 786 L+ QKRL+ASVLKCG+ KVW+DPNE++EIS ANSRQNIRKLVKDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ RKYRE+ KID+H+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ KA+R+R+ EE+ Sbjct: 4 LRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSTVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRARAKAARQRRAKAVEEK 180
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19A_SCHPO (60S ribosomal protein L19-A OS=Schizosaccharomyces pombe GN=rpl19a PE=1 SV=3) HSP 1 Score: 204.912 bits (520), Expect = 4.146e-52 Identity = 98/177 (55.37%), Postives = 131/177 (74.01%), Query Frame = -3 Query: 256 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 786 L+ QKRL+ASVLKCG+ KVW+DPNE++EIS ANSRQN+RKL+KDG +IRKP +HSR R R+ AKR GRH+GYGKRKGT EAR+P+ RKYRE+ KID+H+YH +Y++ KGN FK+KR L+E I ++KAE R K + +Q +A+RA+ KA+R+R+ EE+ Sbjct: 4 LRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQQDARRARAKAARQRRAKAVEEK 180
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_YEAST (60S ribosomal protein L19 OS=Saccharomyces cerevisiae GN=RPL19A PE=1 SV=5) HSP 1 Score: 192.971 bits (489), Expect = 1.630e-48 Identity = 94/177 (53.11%), Postives = 129/177 (72.88%), Query Frame = -3 Query: 256 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 786 L+ QKRL+ASV+ G+ KVWLDPNE +EI+ ANSR IRKLVK+G I++K +HS+SR R ++KR+GRHSGYGKRKGTREARLP++ KYR+A KID+H+YH +Y + KGN FK+KR L+E I ++KA+ REK L+++ EA+R KN+A+R+R+ R E+ Sbjct: 4 LRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEK 180
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_PYRHO (50S ribosomal protein L19e OS=Pyrococcus horikoshii GN=rpl19e PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.072e-27 Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = -3 Query: 382 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVL 786 LK+Q+R++A +LKCG +VW+DP +V+E++ A +R++IR+L+K+G I +KP + SR RAR E K+KGRH G G RKG + AR+ K RK +E KKIDR Y +Y++ KG FKNK L Sbjct: 4 LKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of CV884484 vs. ExPASy Swiss-Prot
Match: RL19_PYRAB (50S ribosomal protein L19e OS=Pyrococcus abyssi GN=rpl19e PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.615e-27 Identity = 61/148 (41.22%), Postives = 90/148 (60.81%), Query Frame = -3 Query: 343 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKXXXXXXXXXXXXXXRKYREAKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAR 786 LK+Q+R++A +LKCG ++W+DP V++++ A +R++IR+L+K+G I +KP K SR RAR E K+KGRH G G RKG + AR+ K RK +E KKIDR Y +Y++ KG FK+K L + + K R Sbjct: 4 LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151 The following BLAST results are available for this feature:
BLAST of CV884484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884484 ID=CV884484; Name=CV884484; organism=Citrus sinensis; type=EST; length=791bpback to top |