CV884477

Overview
NameCV884477
Unique NameCV884477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_ARATH (Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.067e-41
Identity = 85/168 (50.60%), Postives = 115/168 (68.45%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGL--ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            VL +F GEC  CR C S++SN C++L +  ER G++H D ++RFSI GKP+YH+   S+FSEYTVVHSG   K++  APL+K+               NVA   KG +V IFGLG VGL  A+GA+  GASRIIGVD N ++ ++AK FGVTE +NP D+++P+QQV+
Sbjct:   91 VLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIH-DGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECVNPKDHDKPIQQVI 257          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.820e-41
Identity = 85/166 (51.20%), Postives = 113/166 (68.07%), Query Frame = 1
Query:    4 LTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            L VF GEC  C  CKS++SN C++L +   RGVM +D ++RFSIKG+PV+H+   S+FSEYTVVH+GC  K++  APL+K+               NVA    GS+V IFGLG VGL+ A+GA+  GASRIIGVD    + E AK FGV EF+NP ++++PVQQV+
Sbjct:   93 LPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVI 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.294e-41
Identity = 80/167 (47.90%), Postives = 112/167 (67.07%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  +  ECK C+ CKS K+N C +V      GVM +D ++RFS+ GKP+YH+   S+FS+YTVVH     K++  APL+K+              WN A +  GS V +FGLGTVGL+VA+GAKA GASR+IG+D + +K + AK FGVTEF+NP ++++P+QQVL
Sbjct:   93 VIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVL 259          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.915e-41
Identity = 81/167 (48.50%), Postives = 113/167 (67.66%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  +  EC+ C+ CKS K+N C +V      GVM +D+++RFSI GKP+YH+   S+FS+YTVVH     K++  APL+K+              WN A +  GS V IFGLGTVGL+VA+GAK+ GASRIIG+D + +K + AK FGVTEF+NP D+++P+QQV+
Sbjct:   93 VIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVI 259          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.915e-41
Identity = 81/167 (48.50%), Postives = 113/167 (67.66%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  +  EC+ C+ CKS K+N C +V      GVM +D+++RFSI GKP+YH+   S+FS+YTVVH     K++  APL+K+              WN A +  GS V IFGLGTVGL+VA+GAK+ GASRIIG+D + +K + AK FGVTEF+NP D+++P+QQV+
Sbjct:   93 VIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVI 259          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.540e-40
Identity = 81/167 (48.50%), Postives = 110/167 (65.87%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  +  EC  C+ CKS K+N C +V      GVM +D+++RFS+KGKP+YH+   S+FS+YTVVH     K+   APL+K+              WN A +  GS V IFGLGTVGL+VA+GAK+ GASRIIG+D +  K + AK FGVTEF+NP D+ +P+QQV+
Sbjct:   90 VIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVI 256          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 2.012e-40
Identity = 78/167 (46.71%), Postives = 110/167 (65.87%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  +  EC+ C+ CKS K+N C +V      G+M +D+++RFS+ GKP+YH+   S+FS+YTVVH     K+   APL+K+              WN A +  GS V IFGLGTVGL+VA+GAK  GASRIIG+D + +K E AK FGV EF+NP D+++P+Q+V+
Sbjct:   91 VIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVI 257          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.459e-38
Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRF--SIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQ 492
            VL +F GEC  CR CK D +N CE   ++  + VM +D +TRF  S   KP+YH+   S+FSEYTV+ S C +KV  + PLEKI              WNVADI   STV IFGLG VGL+VA+GA+ARGAS+IIG+D NP+K +  +  G++EF+NP ++++ V +
Sbjct:   92 VLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVSTGVGAAWNVADIQPASTVAIFGLGAVGLAVAEGARARGASKIIGIDINPDKFQLGREAGISEFINPKESDKAVHE 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.697e-36
Identity = 75/176 (42.61%), Postives = 110/176 (62.50%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSI---------KGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  F GEC  C+ CK ++SN CE   ++  + VM +D  TRFS          + +P+YH+   S+F+EYTV+ S C VK+   +PL+++              WN+A++ +G +  +FGLG+VGL+VA+GA+ARGASRIIGVD N  K EK K  GVT+F+NP D  +PV Q++
Sbjct:   93 VIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFEKGKLMGVTDFINPKDLTKPVHQMI 268          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.154e-34
Identity = 69/166 (41.57%), Postives = 103/166 (62.05%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +++ +C  C+ CK+ K+N C+ + + +   +  D+ +RF+ KGK V+H+   S+FSEYTVV      KV+  AP++K+               N A +  GST  +FGLG VGL+V  G K  GA+RIIG+D NP K E AK FG TEF+NP D+++P+Q+VL
Sbjct:   91 VIPLYVPQCGECKFCKNPKTNLCQKIRITQGQGLLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVL 256          
The following BLAST results are available for this feature:
BLAST of CV884477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_ARATH1.067e-4150.60Alcohol dehydrogenase class-P OS=Arabidopsis thali... [more]
ADH1_PEA1.820e-4151.20Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADHX_MAIZE5.294e-4147.90Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ORYSJ6.915e-4148.50Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI6.915e-4148.50Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_PEA1.540e-4048.50Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH2.012e-4046.71Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHL4_ARATH2.459e-3847.90Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHL3_ARATH6.697e-3642.61Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_SPAAU2.154e-3441.57Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884477 ID=CV884477; Name=CV884477; organism=Citrus sinensis; type=EST; length=898bp
GTGCTTACAGTATTTATTGGAGAATGCAAGACATGCAGACAGTGTAAATC
TGATAAAAGCAACACGTGTGAAGTTCTGGGATTGGAAAGGAGAGGTGTGA
TGCACAGTGATCAGCAGACACGCTTCTCAATTAAAGGAAAGCCTGTTTAT
CACTATTGTGCTGTTTCAAGTTTCAGTGAGTATACCGTGGTGCATTCTGG
ATGTGCTGTCAAAGTTAGCTCAATTGCACCACTTGAAAAAATATGCCTTC
TGAGTTGTGGACTATCTGCAGGTCTTGGAGCAGCGTGGAATGTGGCAGAT
ATATCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCT
TTCTGTTGCACAAGGTGCAAAAGCCAGAGGAGCGTCTAGAATTATTGGCG
TTGACACTAACCCTGAGAAATGTGAAAAAGCCAAAGCTTTTGGAGTTACA
GAGTTTCTCAACCCAAATGATAATAATGAACCTGTTCAACAGGTATTACC
ATTTAGTCTAGTTAGCAGCAACAGTTTAGCAACTTTTTAACAAAATAAAG
AAAAAATTTGTATGAGTACATAAGAAGTGCATTAGTGAGACACAAAGTGG
TTATCTCTACTTTTTAATCTAGTTCTTTTTCGCTCCCAAAAAACAAACAA
GGGACTACTCAGCCTTATCACCAGTGGTAATAAGAATTCAGATCCTATTG
AAGAAGCTATTTATAGTGTGTAATATGCAAGTATAACAAGGAAATGCAAA
CATGAGCTCTAATTTTGTGCCCTTCCATGTAGCATACTTGTGGAGACATG
CAATTGCAGACACACTGATGTGCTGATGCAATGCACACCTGCAATACATA
ATTTAATAGAATCCTGAAGTTTGATCAACATTCTGTGTTTATTAACAT
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