CV884477

Overview
NameCV884477
Unique NameCV884477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.967e-31
Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I +C  C+ C + K+N C+ + + +   +  D  +RF+ KGKP+ H+   S+FSEYTVV      K+   APL+K+               N A +  GST  +FGLG VGL+V  G K  GASRIIG+D N +K  KAK FG TE +NP D ++ +Q+VL
Sbjct:   89 VIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSKSIQEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 135.191 bits (339), Expect = 4.967e-31
Identity = 67/166 (40.36%), Postives = 97/166 (58.43%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I +C  C+ C + K+N C+ + + +   +  D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+               N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP D ++P+Q+VL
Sbjct:   89 VIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.967e-31
Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I +C  C+ C + ++N C+ +   +   +  D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+               N A +  GST  IFGLG VGL+V  G K  GASRIIGVD N +K  KAK FG +E +NP D ++P+Q+VL
Sbjct:   89 VIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.967e-31
Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C+ C  C++ + N C    L  RGV+ +D  TRF+ KGKPV H+   S+F+EYTV+      K+ + AP EK                  A +S GST  +FGLG VGLSV  G KA GASRIIG+D N +K +KA   G TE +NP D  +P+ +VL
Sbjct:   90 VIPLFLPQCRECNPCRNPEGNLCIRSDLTGRGVL-ADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGIDINKDKFQKALDVGATECINPRDFTKPISEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.967e-31
Identity = 68/166 (40.96%), Postives = 92/166 (55.42%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F  +C  CR CKS + N C    L        D   RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+               NVA ++ GS   +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP D  +P+Q+VL
Sbjct:   90 VIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGTLQDGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.487e-31
Identity = 66/166 (39.76%), Postives = 98/166 (59.04%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I +C  C+ C + K+N C+ + + +   +  D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+               N A +  GST  +FGLG VGL+V  G K  GA+RIIGVD N +K  +AK FG +E +NP D ++P+Q+VL
Sbjct:   89 VIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSKPIQEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 1.107e-30
Identity = 67/166 (40.36%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I +C  C+ C + K+N C+ + + +   +  D  +RF+ KGK + HY   S+FSEYTVV      K+   APL+K+               N A +  GST  +FGLG VGL+   G KA GASRII VD N +K  +AK FG TE +NP D ++P+Q+VL
Sbjct:   89 VIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.107e-30
Identity = 75/159 (47.17%), Postives = 93/159 (58.49%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-----EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 462
            VL VF   C+ CR CKS KSN C     + L   RR  M S  +  F   G+ +YH+  VSSFSEYTVV     VK+S   P++K               W VA++ KGSTV +FGLG VGL+V +GA+ RGA +IIGVD NPEK E  K FG T+F+N
Sbjct:   99 VLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRFKDSF---GEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGAGKIIGVDLNPEKFELGKKFGFTDFIN 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.107e-30
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV----MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +++ +C  C+ C + K+N CE +   +  +    + SD  +RF+ KGKP+YH+   S+FSEYTVV      K+ + APL+K+               N A +  GST  +FGLG VGLS   G KA GAS+I G+D N +K   AK  G T+ LNP D  +PVQ+++
Sbjct:   90 VIPLYMPQCGHCKFCLNPKTNLCEKISKIKTPISDQEVMSDGTSRFTCKGKPIYHFMGTSTFSEYTVVSESSLAKIDAAAPLDKVCLIGCGFSTGYGAAINTAQVEPGSTCAVFGLGGVGLSAVMGCKAAGASKIFGIDINKDKFPLAKKLGATDCLNPQDIRKPVQEII 259          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 1.107e-30
Identity = 68/166 (40.96%), Postives = 92/166 (55.42%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C  C  C+  + N C+   L     +  D  +RF+ +GKPVYH+    +F+EYTV      VK+ + APLEK+               N A +  GST  +FGLG VGLS   G KA GASRIIG+D N EK  KAK  G TE +NP D  +P+ +VL
Sbjct:   89 VIPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDYKKPINEVL 254          
The following BLAST results are available for this feature:
BLAST of CV884477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHX_RAT4.967e-3140.36Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_HUMAN4.967e-3140.36Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_HORSE4.967e-3140.96Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADH7_RAT4.967e-3142.17Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH1B_PAPHA4.967e-3140.96Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADHX_BOVIN6.487e-3139.76Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_RABIT1.107e-3040.36Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHL5_ARATH1.107e-3047.17Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADH4_STRCA1.107e-3038.82Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADH1B_UROHA1.107e-3040.96Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884477 ID=CV884477; Name=CV884477; organism=Citrus sinensis; type=EST; length=898bp
GTGCTTACAGTATTTATTGGAGAATGCAAGACATGCAGACAGTGTAAATC
TGATAAAAGCAACACGTGTGAAGTTCTGGGATTGGAAAGGAGAGGTGTGA
TGCACAGTGATCAGCAGACACGCTTCTCAATTAAAGGAAAGCCTGTTTAT
CACTATTGTGCTGTTTCAAGTTTCAGTGAGTATACCGTGGTGCATTCTGG
ATGTGCTGTCAAAGTTAGCTCAATTGCACCACTTGAAAAAATATGCCTTC
TGAGTTGTGGACTATCTGCAGGTCTTGGAGCAGCGTGGAATGTGGCAGAT
ATATCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCT
TTCTGTTGCACAAGGTGCAAAAGCCAGAGGAGCGTCTAGAATTATTGGCG
TTGACACTAACCCTGAGAAATGTGAAAAAGCCAAAGCTTTTGGAGTTACA
GAGTTTCTCAACCCAAATGATAATAATGAACCTGTTCAACAGGTATTACC
ATTTAGTCTAGTTAGCAGCAACAGTTTAGCAACTTTTTAACAAAATAAAG
AAAAAATTTGTATGAGTACATAAGAAGTGCATTAGTGAGACACAAAGTGG
TTATCTCTACTTTTTAATCTAGTTCTTTTTCGCTCCCAAAAAACAAACAA
GGGACTACTCAGCCTTATCACCAGTGGTAATAAGAATTCAGATCCTATTG
AAGAAGCTATTTATAGTGTGTAATATGCAAGTATAACAAGGAAATGCAAA
CATGAGCTCTAATTTTGTGCCCTTCCATGTAGCATACTTGTGGAGACATG
CAATTGCAGACACACTGATGTGCTGATGCAATGCACACCTGCAATACATA
ATTTAATAGAATCCTGAAGTTTGATCAACATTCTGTGTTTATTAACAT
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