CV884477

Overview
NameCV884477
Unique NameCV884477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C+S K+N C  V   + +G+M  D  TRFS +G+P+YHY   S+FSEY+VV      K++  A  E++               N A + +G +V +FGLG +GL+V QGA+   A RII +DTNP K E AK FG T+ LNPND ++P++ VL
Sbjct:   93 VIPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLM-PDCTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDYDKPIKDVL 258          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.445e-30
Identity = 70/167 (41.92%), Postives = 101/167 (60.48%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I +C  C+ C + K+N C+ + + + +GVM  D  +RF+ KGK V H+   S+FSEYTVV      K+++ APL+K+               N A +  GST  +FGLG VGL+V  G K  GASRIIG+D N +K  KAK FG TE ++P D  +P+Q+VL
Sbjct:   88 VIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFKKPIQEVL 253          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +++ +C  C+ CK+ K+N C+ + L +   +  +  +RFS  G+ ++H+   S+FSEYTVV      KV   APL+K+               N A +  GST  +FGLG +GL+V  G +A GASRII +D NP+K   AK FG T+ +NP D+++PV+QVL
Sbjct:   90 VIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDHSKPVEQVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.887e-30
Identity = 70/166 (42.17%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C+ C  C + + N C    L   GV+ +D  TRF+ KGKPV H+   S+F+EYTV+      KV   AP EK                  A ++ GST V+FGLG VGLSV  G KA GASRIIG+D N +K +KA A G TE ++P D+ +P+ +VL
Sbjct:   90 VIPLFLPQCRECNACLNPEGNLCIRSDLTGCGVL-ADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGYGAAVKTAKVTPGSTCVVFGLGGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATECISPKDSTKPISEVL 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.465e-30
Identity = 70/167 (41.92%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C S K+N C  V   + +GVM  D  +RF + G+P+YHY   S+FSEYTVV      K++  A  E++               N A + +G +V +FGLG +GL+V QGA+   A RI  +DTNP K E AK FG T+ +NPND ++PVQQVL
Sbjct:   84 VIPLYTAECGECDFCTSGKTNLCVAVRETQGKGVM-PDATSRFFVNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCINPNDYDKPVQQVL 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1A_HUMAN (Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.465e-30
Identity = 67/166 (40.36%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ + I +C  CR CK+ +SN C    +        D  +RF+ + KP++H+  +S+FS+YTVV      K+ + +PLEK+               NVA ++ GST  +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP D  +P+Q+VL
Sbjct:   90 VIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.367e-30
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C+S K+N C  V   + +G+M  D  TRFS  G+P+YHY   S+FSEYTVV      K++  A  E +               N A +  G +V +FGLG +GL+V QGA+   A RII +DTNP+K E A+ FG T+ +NPND ++P++ VL
Sbjct:   84 VIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVL 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.367e-30
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C+S K+N C  V   + +G+M  D  TRFS  G+P+YHY   S+FSEYTVV      K++  A  E +               N A +  G +V +FGLG +GL+V QGA+   A RII +DTNP+K E A+ FG T+ +NPND ++P++ VL
Sbjct:   84 VIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVL 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.367e-30
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C+S K+N C  V   + +G+M  D  TRFS  G+P+YHY   S+FSEYTVV      K++  A  E +               N A +  G +V +FGLG +GL+V QGA+   A RII +DTNP+K E A+ FG T+ +NPND ++P++ VL
Sbjct:   84 VIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVL 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.367e-30
Identity = 66/166 (39.76%), Postives = 91/166 (54.82%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C  C  C     N C    L     + +D  +RF+ KGK ++H+   S+F+EYTVVH     ++ + APLEK+                 A +  GST  +FGLG VGLS   G KA GASRIIG+D N +K  KAK  G TE +NP D  +P+Q+VL
Sbjct:   89 VIPLFVPQCGECMPCLKSNGNLCIRNDLGSPSGLMADGTSRFTCKGKDIHHFIGTSTFTEYTVVHETAVARIDAAAPLEKVCLIGCGFSTGYGAAVKDAKVEPGSTCAVFGLGGVGLSTIMGCKAAGASRIIGIDINKDKFAKAKELGATECINPLDCKKPIQEVL 254          
The following BLAST results are available for this feature:
BLAST of CV884477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
FRMA_HAEIN1.445e-3041.32S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADHX_UROHA1.445e-3041.92Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHL_GADMO1.887e-3039.16Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH7_MOUSE1.887e-3042.17Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
FRMA_PASPI2.465e-3041.92S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADH1A_HUMAN2.465e-3040.36Alcohol dehydrogenase 1A OS=Homo sapiens GN=ADH1A ... [more]
FRMA_ECOUT9.367e-3040.72S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL59.367e-3040.72S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK19.367e-3040.72S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH1_ALLMI9.367e-3039.76Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884477 ID=CV884477; Name=CV884477; organism=Citrus sinensis; type=EST; length=898bp
GTGCTTACAGTATTTATTGGAGAATGCAAGACATGCAGACAGTGTAAATC
TGATAAAAGCAACACGTGTGAAGTTCTGGGATTGGAAAGGAGAGGTGTGA
TGCACAGTGATCAGCAGACACGCTTCTCAATTAAAGGAAAGCCTGTTTAT
CACTATTGTGCTGTTTCAAGTTTCAGTGAGTATACCGTGGTGCATTCTGG
ATGTGCTGTCAAAGTTAGCTCAATTGCACCACTTGAAAAAATATGCCTTC
TGAGTTGTGGACTATCTGCAGGTCTTGGAGCAGCGTGGAATGTGGCAGAT
ATATCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCT
TTCTGTTGCACAAGGTGCAAAAGCCAGAGGAGCGTCTAGAATTATTGGCG
TTGACACTAACCCTGAGAAATGTGAAAAAGCCAAAGCTTTTGGAGTTACA
GAGTTTCTCAACCCAAATGATAATAATGAACCTGTTCAACAGGTATTACC
ATTTAGTCTAGTTAGCAGCAACAGTTTAGCAACTTTTTAACAAAATAAAG
AAAAAATTTGTATGAGTACATAAGAAGTGCATTAGTGAGACACAAAGTGG
TTATCTCTACTTTTTAATCTAGTTCTTTTTCGCTCCCAAAAAACAAACAA
GGGACTACTCAGCCTTATCACCAGTGGTAATAAGAATTCAGATCCTATTG
AAGAAGCTATTTATAGTGTGTAATATGCAAGTATAACAAGGAAATGCAAA
CATGAGCTCTAATTTTGTGCCCTTCCATGTAGCATACTTGTGGAGACATG
CAATTGCAGACACACTGATGTGCTGATGCAATGCACACCTGCAATACATA
ATTTAATAGAATCCTGAAGTTTGATCAACATTCTGTGTTTATTAACAT
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