CV884477

Overview
NameCV884477
Unique NameCV884477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.930e-29
Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++   C  C  C+S K+N C  V   + +G+M  D  TRFS  G+P+YHY   S+FSEYTVV      K++  A  E +               N A +  G +V +FGLG +GL+V QGA+   A RII +DTNP+K E A+ FG T+ +NPND ++P++ VL
Sbjct:   84 VIPLYTEXCGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVL 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.930e-29
Identity = 73/161 (45.34%), Postives = 97/161 (60.25%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-----EVLGLERRGVMHSDQQTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 465
            VL VF  +C+ C++C S KSN C     + L   RR  M S    RF   +G+ ++H+  VSSF+EYTVV     VK+S   P++                W VAD+ +GSTVVIFGLG VGL+VA+G + RGA++IIGVD NP K E  K FG+T+F+NP
Sbjct:   96 VLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTS----RFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGAAKIIGVDLNPAKFEIGKRFGITDFVNP 252          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.036e-28
Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS----DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++I  CK C+ C S  +N CE     +  ++      D+ +RF+ KGK +YH+  +S+FS+YTVV      K+   A LE++               N A ++ GST  +FGLG VGLS   G K  GASRII +D N +K  KAKA G T+ LNP + N+PVQ V+
Sbjct:   91 VIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFTCKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSAIMGCKTAGASRIIAIDINSDKFAKAKALGATDCLNPRELNKPVQDVI 260          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 1.036e-28
Identity = 67/166 (40.36%), Postives = 94/166 (56.63%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C +CR CKS  SN CE   +  +  + +D  +RF+ +GKP+Y+    S+F+EYTVV      K+   APLE                 N A ++ GST  +FGLG VG S   G KA GASRIIGV T+ +K  KA   G TE LNP D ++P+ +V+
Sbjct:   90 VIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLVGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAV-NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVI 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.036e-28
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C  CR CK+ +SN C    + +   +  D+ +RF+ KGK ++++ + S+F+EYTV+      K+   APLEK+               N   +  GST  +FGLG VGLSV  G K  GASRIIGVD N +K   AK  G TE +NP D N P+ +VL
Sbjct:   90 VIPLFVPQCGECRCCKNPESNLCYKNDIGKYDGVLLDKTSRFTCKGKSIHNFISTSTFTEYTVLDEIAVAKIHEDAPLEKVCLIGCGFSTGYGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDYNIPIHEVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.353e-28
Identity = 66/167 (39.52%), Postives = 96/167 (57.49%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C+S K+N C  V   + +G+M  D  TRFS  G+P+YHY   S+FSEYTVV      K++  A  E +               N A +    +V +FGLG +GL+V QGA+   A RII +DTNP+K + A+ FG T+ +NPND ++P++ VL
Sbjct:   84 VIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVL 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.353e-28
Identity = 67/161 (41.61%), Postives = 95/161 (59.01%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCE------VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 465
            VL VF   C+ C+ CKS K+N C+      +    R G+    + +     G+ ++H+  VSSFSEYTVV     VK+S   P++K               W VA++ +GST+ IFGLG VGL+VA+GA+ RGA++IIG+DTN +K E  K FG T+F+NP
Sbjct:   98 VLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRFKDS----SGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGAAKIIGIDTNSDKFELGKKFGFTDFINP 254          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.767e-28
Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++  EC  C  C+S K+N C  V   + +GVM  D  +RFS  G+ +YHY   S+FSEYTVV      K++  A  E +               N A +  G +V +FGLG +GL+V QGA+   A RII +DTNP K E AK  G T+ +NP D+++P+QQV+
Sbjct:   84 VIPLYTAECGKCLFCRSGKTNLCVAVRATQGKGVM-PDGTSRFSYNGQSLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGGIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQMGATDCINPKDHDQPIQQVI 249          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.767e-28
Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 471
            V+ ++I +C  C+ CKS K+N C+ + L +   +  +  +R S KG+ ++H+   S+F+EYTVV      K++  APLEK+               N A +  GST  ++GLG VGL+V  G K  GA +I G+D NP+K E AK FG T+F+NP D
Sbjct:   92 VIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVMPEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKD 248          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 126.716 bits (317), Expect = 1.767e-28
Identity = 68/170 (40.00%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV----MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ ++   C+ C+ C S  +N C  +   +       +  D+ +RF+ KGKPVYH+   S+FS+YTVV      K+   A LE++               N A ++ GST  +FGLG VGLS   G KA GASRIIG+D N EK  KAKA G T+ LNP D ++P+Q+V+
Sbjct:   91 VIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVI 260          
The following BLAST results are available for this feature:
BLAST of CV884477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
FRMA_ECOL67.930e-2940.12S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADHL2_ARATH7.930e-2945.34Alcohol dehydrogenase-like 2 OS=Arabidopsis thalia... [more]
ADHP_RABIT1.036e-2839.41Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH8_RANPE1.036e-2840.36NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH1_RANPE1.036e-2839.76Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
FRMA_ECOSM1.353e-2839.52S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADHL1_ARATH1.353e-2841.61Alcohol dehydrogenase-like 1 OS=Arabidopsis thalia... [more]
FRMA_SYNY31.767e-2840.12S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
ADHX_DROME1.767e-2838.85Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADH4_HUMAN1.767e-2840.00Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884477 ID=CV884477; Name=CV884477; organism=Citrus sinensis; type=EST; length=898bp
GTGCTTACAGTATTTATTGGAGAATGCAAGACATGCAGACAGTGTAAATC
TGATAAAAGCAACACGTGTGAAGTTCTGGGATTGGAAAGGAGAGGTGTGA
TGCACAGTGATCAGCAGACACGCTTCTCAATTAAAGGAAAGCCTGTTTAT
CACTATTGTGCTGTTTCAAGTTTCAGTGAGTATACCGTGGTGCATTCTGG
ATGTGCTGTCAAAGTTAGCTCAATTGCACCACTTGAAAAAATATGCCTTC
TGAGTTGTGGACTATCTGCAGGTCTTGGAGCAGCGTGGAATGTGGCAGAT
ATATCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCT
TTCTGTTGCACAAGGTGCAAAAGCCAGAGGAGCGTCTAGAATTATTGGCG
TTGACACTAACCCTGAGAAATGTGAAAAAGCCAAAGCTTTTGGAGTTACA
GAGTTTCTCAACCCAAATGATAATAATGAACCTGTTCAACAGGTATTACC
ATTTAGTCTAGTTAGCAGCAACAGTTTAGCAACTTTTTAACAAAATAAAG
AAAAAATTTGTATGAGTACATAAGAAGTGCATTAGTGAGACACAAAGTGG
TTATCTCTACTTTTTAATCTAGTTCTTTTTCGCTCCCAAAAAACAAACAA
GGGACTACTCAGCCTTATCACCAGTGGTAATAAGAATTCAGATCCTATTG
AAGAAGCTATTTATAGTGTGTAATATGCAAGTATAACAAGGAAATGCAAA
CATGAGCTCTAATTTTGTGCCCTTCCATGTAGCATACTTGTGGAGACATG
CAATTGCAGACACACTGATGTGCTGATGCAATGCACACCTGCAATACATA
ATTTAATAGAATCCTGAAGTTTGATCAACATTCTGTGTTTATTAACAT
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