CV884477

Overview
NameCV884477
Unique NameCV884477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.307e-28
Identity = 69/167 (41.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F  +C  CR CK  +SN C    L   RG +  +  +RFS KGK ++++ + S+FS+YTVV      K+   +PL+K+                VA ++ GST  +FGLG VGLSV  G KA GA+RII VD N +K  KAK  G TE +NP D ++P+Q+VL
Sbjct:   90 VIPLFSPQCGECRICKHPESNFCSRSDLLMPRGTLR-EGTSRFSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSKPIQEVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.936e-28
Identity = 69/156 (44.23%), Postives = 91/156 (58.33%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM-HSDQQTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 462
            VL  F+ +C  C  CKS KSN C     +    M   D  +RF+ + G+ ++H+  VSSFSEYTV+     VK+ S  P  +               W  A + KGSTVVIFGLG++GL+VA+GA+  GASRIIGVD NP K +  + FGVTEF+N
Sbjct:  100 VLPTFMPDCGDCVDCKSHKSNLCSKFPFKVSPWMPRYDNSSRFTDLNGETLFHFLNVSSFSEYTVLDVANVVKIDSSIPPSRACLLSCGVSTGVGAAWETAKVEKGSTVVIFGLGSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVN 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.140e-28
Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 483
            V+ +++ +CK C  CK+ K+N C+ + + +      D  +RF+  GK ++H+   S+FSEYTVV      KV+  APLEK+               N   + +GSTV ++GLG VGL+V  GAKA GA +I+G+D    K E AK FG TE +NP     P
Sbjct:   92 VVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELP 252          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.767e-28
Identity = 66/156 (42.31%), Postives = 88/156 (56.41%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 468
            V+ ++I EC TC+ C S+K+N C  + + +      D  TRF  KGK ++H+   S+FS+YTV+       V   APL+K+                 A + +GSTV IFGLG VGLSVAQGA   GA RIIG+D N  K    K FG TEF+NP+
Sbjct:   91 VIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFINPS 246          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 8.767e-28
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F  +C  CR CK  + N C    L + RG +  D  +RF+ +GK ++++ + S+FS+YTVV      K+   +PLEK+                VA ++ GST  +FGLG VGLSV  G KA GA+RII VD N +K  KAK  G TE +NP D ++P+Q+VL
Sbjct:   90 VIPLFTPQCGKCRICKHPEYNLCMKNDLMQPRGTL-LDGTSRFTCRGKAIHNFISTSTFSQYTVVDEMAVAKIDGASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPLDYSKPIQEVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_GEOBU (Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH1 PE=2 SV=3)

HSP 1 Score: 124.405 bits (311), Expect = 8.767e-28
Identity = 66/166 (39.76%), Postives = 92/166 (55.42%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C  CR CK  +SN C+   L R      D  +RF+ KGKP++H+  V++FSEYTVV      K+ + +PLEK+                V  +++GS       G VGLS   G KA GA+RII VD N +K  KAK  G TE +NP D ++P+ QVL
Sbjct:   90 VIPLFVPQCGKCRACKHPESNLCKHGDLGRAQGTLMDGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDATSPLEKVCLIGCGFSTGYGSAVKVGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYQVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.145e-27
Identity = 64/170 (37.65%), Postives = 95/170 (55.88%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS----DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +++  C+ C+ C+S  +N C      +  ++      D+ +RF+ KGK +YH+  +S+FS+YTVV      K+   A L+++               N A ++ GST  +FGLG VGLS   G K  GASRII VD N +K  KAKA G T+ LNP + N+PVQ V+
Sbjct:   91 VIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRFTCKGKSIYHFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVFGLGGVGLSAVIGCKTAGASRIIAVDINSDKFAKAKALGATDCLNPRELNKPVQDVI 260          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_GEOKN (Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=ADH1 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.496e-27
Identity = 66/166 (39.76%), Postives = 91/166 (54.82%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C  CR CK  +SN C    L R      D  +RF+ KGKP++H+  V++FSEYTVV      K+ + +PLEK+                V  +++GS       G VGLS   G KA GA+RII VD N +K  KAK  G TE +NP D ++P+ QVL
Sbjct:   90 VIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLMDGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICSCVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYQVL 255          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.953e-27
Identity = 68/170 (40.00%), Postives = 93/170 (54.71%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS----DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+  F  +CK C+ C S  +N C  L   +   +      D+ +RF+ KG+ +YH+  VSSFS+YTVV      +V   A LE++               N A ++ GST  +FGLG VGLS   G K  GASRII +D N EK  KAKA G T+ LNP + ++PVQ V+
Sbjct:   90 VIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVI 259          
BLAST of CV884477 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.953e-27
Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 1
Query:    1 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVL 498
            V+ +F+ +C  CR CK  +SN C    L R      D  +RF+ KGKP++H+  V++FSEYTVV      K+ + +PLEK+                V  +++GS       G VGLS   G KA GA+RII VD N +K  KAK  G TE +NP D ++P+ +VL
Sbjct:   90 VIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLMDGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFSTGYGSAVKVGKVARGSICACVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYEVL 255          
The following BLAST results are available for this feature:
BLAST of CV884477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1_MOUSE2.307e-2841.32Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADHL7_ARATH3.936e-2844.23Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADHX_CAEEL5.140e-2838.51Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHX_DICDI8.767e-2842.31Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_PERMA8.767e-2840.72Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_GEOBU8.767e-2839.76Alcohol dehydrogenase 1 OS=Geomys bursarius GN=ADH... [more]
ADHQ_RABIT1.145e-2737.65Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH1_GEOKN1.496e-2739.76Alcohol dehydrogenase 1 OS=Geomys knoxjonesi GN=AD... [more]
ADH4_MOUSE1.953e-2740.00Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1_GEOAT1.953e-2739.16Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T3_F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884477 ID=CV884477; Name=CV884477; organism=Citrus sinensis; type=EST; length=898bp
GTGCTTACAGTATTTATTGGAGAATGCAAGACATGCAGACAGTGTAAATC
TGATAAAAGCAACACGTGTGAAGTTCTGGGATTGGAAAGGAGAGGTGTGA
TGCACAGTGATCAGCAGACACGCTTCTCAATTAAAGGAAAGCCTGTTTAT
CACTATTGTGCTGTTTCAAGTTTCAGTGAGTATACCGTGGTGCATTCTGG
ATGTGCTGTCAAAGTTAGCTCAATTGCACCACTTGAAAAAATATGCCTTC
TGAGTTGTGGACTATCTGCAGGTCTTGGAGCAGCGTGGAATGTGGCAGAT
ATATCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTAGGCCT
TTCTGTTGCACAAGGTGCAAAAGCCAGAGGAGCGTCTAGAATTATTGGCG
TTGACACTAACCCTGAGAAATGTGAAAAAGCCAAAGCTTTTGGAGTTACA
GAGTTTCTCAACCCAAATGATAATAATGAACCTGTTCAACAGGTATTACC
ATTTAGTCTAGTTAGCAGCAACAGTTTAGCAACTTTTTAACAAAATAAAG
AAAAAATTTGTATGAGTACATAAGAAGTGCATTAGTGAGACACAAAGTGG
TTATCTCTACTTTTTAATCTAGTTCTTTTTCGCTCCCAAAAAACAAACAA
GGGACTACTCAGCCTTATCACCAGTGGTAATAAGAATTCAGATCCTATTG
AAGAAGCTATTTATAGTGTGTAATATGCAAGTATAACAAGGAAATGCAAA
CATGAGCTCTAATTTTGTGCCCTTCCATGTAGCATACTTGTGGAGACATG
CAATTGCAGACACACTGATGTGCTGATGCAATGCACACCTGCAATACATA
ATTTAATAGAATCCTGAAGTTTGATCAACATTCTGTGTTTATTAACAT
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