CV884476

Overview
NameCV884476
Unique NameCV884476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_SHEDO (NAD-dependent malic enzyme OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=sfcA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.793e-27
Identity = 81/234 (34.62%), Postives = 120/234 (51.28%), Query Frame = -2
Query:  179 KICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLV-KCAESCMYTPVYRNYR 850
            ++ +VD  GL+  +  + L   +K          W  E + V+ LL+ +   KPT+LIG SG    FT+ VI AM     +P++  LSNPTS+ E T E+   W+ G+A+ A+GSPF+P     + F   Q NN++IFPG GLG++   A RV D+ML+A+S ALA+         G + P   +I+             A   G+A  LP    L+ K  E   + P YR Y+
Sbjct:  328 QVFMVDRLGLLQDNTANLLPFQQKLAQSSATVSQWHIEGDSVS-LLNVINNAKPTVLIGVSGSPGQFTEAVIRAMHLHCPRPIVFPLSNPTSRVEATPEDVLNWTNGQALVATGSPFEPVTIGDETFEIAQCNNSFIFPGIGLGVLACRAKRVSDEMLMASSRALAECSPLGTTRTGSLLPKLDDIQKVSKYIAFAVAKVAMAQGLA--LPLTDELLNKSIEKNFWEPKYRRYK 558          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.059e-27
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = -2
Query:  329 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPF 853
            K   ++D +GL+    +D L   +KP+A +         + +LL+ VK +KPTIL+G+S     FTKEV+EAM +  E+P+I  +SNPT + E TAE+   WS G+A  A+G P     Y G  +  GQANN+ I+PG GLG++ S A  + D+M+ AA+ +L+  V +       + PPF
Sbjct:  318 KHFFMIDQQGLLFDDMED-LTPAQKPFAKKRADYKDAGDMTDLLNVVKTVKPTILVGTSTNPGAFTKEVVEAMCANTERPVIFPISNPTKKMETTAEQVIEWSDGKAFVATGVPSGTISYKGVDYQIGQANNSLIYPGLGLGMLASEAKLLTDEMIGAAAHSLSGLV-DPGKPGAPVLPPF 496          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.518e-26
Identity = 77/234 (32.91%), Postives = 117/234 (50.00%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            ++I +VD  GL+     + L   ++          W  +      LL+ ++  +PT+LIG SG    F++EVI  +     +PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   +     Q NNAYIFPG GLG++ + A RV D ML+AA+ ALA         +G + P   +IR             A   G A +    + L +  E+  + P YR YR
Sbjct:  328 RRIFMVDRWGLLTDDMSNLLDFQQRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHRHCPQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDRRMPIAQCNNAYIFPGIGLGVIAARATRVTDGMLMAAANALANCSPIVTRGEGAVLPALGDIREVSKRIAVAVAKQAQAEGKALQ-TSDEVLNEAIEANFWFPRYRAYR 560          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.982e-26
Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = -2
Query:  317 KKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 853
            ++I +VD  GL+     + L    +          W  +      LL+ ++  +PT+LIG SG    F++EVI  + S  ++PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   K     Q NNAYIFPG GLG++ + A RV + ML+AA+ ALA         +G + P   +IR
Sbjct:  328 RRIFMVDRWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTQGEGAVLPALGDIR 515          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.982e-26
Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = -2
Query:  317 KKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 853
            ++I +VD  GL+     + L    +          W  +      LL+ ++  +PT+LIG SG    F++EVI  + S  ++PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   K     Q NNAYIFPG GLG++ + A RV + ML+AA+ ALA         +G + P   +IR
Sbjct:  328 RRIFMVDRWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAARANRVTEGMLMAAANALANCSPIVTRGEGAVLPALGDIR 515          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.417e-26
Identity = 68/188 (36.17%), Postives = 102/188 (54.26%), Query Frame = -2
Query:  317 KKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIR 853
            ++I +VD  GL+     + L    +          W  +      LL+ ++  +PT+LIG SG    F++EVI  + S  ++PL++ LSNPTS+ E T +E   W+ G+A+ A+GSPF P +   K     Q NNAYIFPG GLG++   A RV + ML+AA+ ALA         +G + P   +IR
Sbjct:  328 RRIFMVDRWGLLTDDMSNLLDFQHRLAQKRADLGAWGGQQGDDLALLEVIRNARPTVLIGVSGQRGLFSEEVIRELHSHCKQPLVMPLSNPTSRVEATPQEILNWTDGQALVATGSPFQPVQVGDKRIPIAQCNNAYIFPGIGLGVIAVRANRVTEGMLMAAANALANCSPIVTQGEGAVLPALGDIR 515          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.533e-26
Identity = 81/234 (34.62%), Postives = 118/234 (50.43%), Query Frame = -2
Query:  179 KICLVDSKGLIVSSRKDSLQHFKKP----------WAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 850
            ++ +VD  G++      +L  F+KP          W  E     +LLD ++   P +LIG +GV   F +E+IEAMA   E+P+++ LSNPTS+ E   E+   W++G+AI A+GSPF      GK +   Q NN+YIFPG GLG++ + A RV ++ML  AS  LA      N    ++ PP S I+             A E G A+     + L +  E   Y   Y  YR
Sbjct:  325 QVFMVDRWGML-EQEMPNLLPFQKPLAQPASLRTEWQIEANREISLLDVIQHAHPDVLIGVTGVPGLFNQEIIEAMAEDCERPVVMPLSNPTSRVEAKPEDILMWTQGQAIVATGSPFPDVVLAGKRYPIAQCNNSYIFPGVGLGVISANAHRVTNEMLQQASITLASLSPMLN-GGNMLLPPLSEIQNVSRKIALEVAKKAVEQGKASHRTEERLLERIDEEFWYAQ-YCEYR 555          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25
Identity = 63/184 (34.24%), Postives = 102/184 (55.43%), Query Frame = -2
Query:  320 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNI 853
            K   LVD +GL+     D L   +KP+A +         + NL  AV+ + PTIL+G+S    +FT+E+++ M+ + E+P+I  +SNPT  +E  AE+   WS G+A+  +G P D  EY G  +  GQANNA I+PG G G + + +  +  +M+ AA+ +L   + +       + PP S +
Sbjct:  319 KHFFLVDKQGLLFDDDPD-LTPEQKPFAAKRSDFKNANQLTNLQAAVEAVHPTILVGTSTHPNSFTEEIVKDMSGYTERPIIFPISNPTKLAEAKAEDVLKWSNGKALIGTGVPVDDIEYEGNAYQIGQANNALIYPGLGFGAIAAQSKLLTPEMISAAAHSLG-GIVDTTKVGAAVLPPVSKL 500          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22
Identity = 58/161 (36.02%), Postives = 88/161 (54.66%), Query Frame = -2
Query:  380 LVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN-------NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALA 841
            ++D  GL++          +KP+  +            NL  A+ ++KPTIL+G SG    FT++ I  M+   E+P+I  +SNPT+  E   ++   WS G+A+ A+GSP  P   NGK +V  Q NNA ++P  G+  V+S    + D ML AAS+ALA
Sbjct:  336 MIDRCGLLLERHAKIATDGQKPFLKKDSDFKEVPSGDINLESAIALVKPTILLGCSGQPGKFTEKAIREMSKHVERPIIFPISNPTTLMEAKPDQIDKWSDGKALIATGSPLPPLNRNGKKYVISQCNNALLYPALGVACVLSRCKLLSDGMLKAASDALA 496          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.297e-21
Identity = 62/164 (37.80%), Postives = 89/164 (54.27%), Query Frame = -2
Query:  377 KKICLVDSKGLIVSSRKDS---LQHFKKPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAK 853
            KKI L+D +GLI+ S + +    QH       E   +N  +L D V+ +KPT L+G S     FT++V+E M   N +P+I  LSNPT   E    +   W+   A+ A+GSPF P +     +   + NN Y FPG GLG V+S A  + D M+ AA + LA+
Sbjct:  414 KKIFLMDRRGLILQSYEANSTPAQHVYAKSDAEWAGINTRSLHDVVENVKPTCLVGCSTQAGAFTQDVVEEMHKHNPRPIIFPLSNPTRLHEAVPADLMKWTNNNALVATGSPFPPVD----GYRISENNNCYSFPGIGLGAVLSRATTITDKMISAAVDQLAE 573          
The following BLAST results are available for this feature:
BLAST of CV884476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEDO1.793e-2734.62NAD-dependent malic enzyme OS=Shewanella denitrifi... [more]
MLES_LACLA3.059e-2738.67Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAO1_PSEA71.518e-2632.91NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAE1.982e-2636.17NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB1.982e-2636.17NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA84.417e-2636.17NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO12_VIBVY7.533e-2634.62NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MLES_OENOE2.863e-2534.24Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAOX_SCHPO1.330e-2236.02NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]
MAOM_YEAST7.297e-2137.80NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884476 ID=CV884476; Name=CV884476; organism=Citrus sinensis; type=EST; length=854bp
TTTTTTTTTTTTTTTTTCACCATGTAGGCAGTGGTCCAACACCTTCATTT
GATAAGTACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATA
ACACACCAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGC
GGAGACAGAAATTTTGGCAGAACATTTAACGATAGTTTCGGTAGACAGGG
GTATACATGCAACTTTCAGCGCACTTCACTAGATTCTGAGGTCGAGGGAG
ACGCGTAGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTA
TATTGGCTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCC
TTCTCAAAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGC
CAGAAGCATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCA
AACCAAATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAA
ACTTTTCCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAAT
TGCACGACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACT
GTGAGGTTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAG
GCCATGGCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGA
TCCAATCAAAATTGTTGGCTTGATTACCTTGACAGCATCTAAGAGATTGT
TGACAGGCTCATGTTCATGAGCCCAAGGCTTCTTGAAGTGTTGAAGTGAA
TCTTTCCGGGAGCTGACTATCAGTCCCTTTGAGTCTACAAGACATATCTT
CTTC
back to top