CV884476

Overview
NameCV884476
Unique NameCV884476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35
Identity = 83/208 (39.90%), Postives = 122/208 (58.65%), Query Frame = -2
Query:  179 DSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 802
            D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+             A + GVA +    + L +  +   + P YR+YR
Sbjct:  360 DNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35
Identity = 83/208 (39.90%), Postives = 122/208 (58.65%), Query Frame = -2
Query:  179 DSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 802
            D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+             A + GVA +    + L +  +   + P YR+YR
Sbjct:  360 DNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35
Identity = 83/208 (39.90%), Postives = 122/208 (58.65%), Query Frame = -2
Query:  179 DSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 802
            D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+             A + GVA +    + L +  +   + P YR+YR
Sbjct:  360 DNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35
Identity = 83/208 (39.90%), Postives = 122/208 (58.65%), Query Frame = -2
Query:  179 DSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 802
            D+LQH    W  E++ V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK     N  +GL+ P   +I+             A + GVA +    + L +  +   + P YR+YR
Sbjct:  360 DNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKHSPLVNNGEGLVLPALKDIQVVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWKPEYRDYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 8.878e-35
Identity = 84/210 (40.00%), Postives = 120/210 (57.14%), Query Frame = -2
Query:  179 RKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 808
            ++DSL    K W  + + ++ LLD V+  KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T  +   W+ G A+ A+GSPF P     K +   Q NNAYIFPG GLG++ SGA+RV D+M++AASEALA      N   GL+ PP ++I+             A + GVA +    + L++  E   + P YR+YR
Sbjct:  359 KRDSL----KGWDTQSDSIS-LLDVVRNAKPDILIGVSGQTGLFTEEIIREMHKHCARPIVMPLSNPTSRVEATPHDILNWTDGAALVATGSPFQPVTVKEKTYPIAQCNNAYIFPGIGLGIISSGALRVTDEMMMAASEALASHSPLVNTGSGLVLPPLTDIQQVSKDIAFAVGKMAQQQGVAVK-TSAEALLQAIEENFWLPEYRSYR 562          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.755e-34
Identity = 88/233 (37.77%), Postives = 124/233 (53.22%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKK-PWAHEH-------EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +++ +VD  GL+     + L    K     EH         V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T +   +W+ G A+ A+GSPF P    GK +   Q NN+YIFPG GLG++ SGA RV D+ML+AASE LAK     N  +G + P   +I+             A E GVA +    + L++      + P YRNYR
Sbjct:  330 QRVFMVDRFGLLTDGMPNLLPFQNKLVQKREHLQGWDTTNDVLSLLDVVRNVKPNILIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFAPVTLKGKQYAIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAKHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVK-TSAEALLQAISDNFWLPEYRNYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.755e-34
Identity = 85/233 (36.48%), Postives = 129/233 (55.36%), Query Frame = -2
Query:  179 KICLVDSKGLIVSSRKDSL---------QHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 850
            ++ +VD  GL+  +  + L         +   K W  ++E V +LLD V+ +KP ILIG SG    FT+E+I  M    E+P+++ LSNPTS+ E T ++   W++G A+ A+GSPFDP  +  KV+   Q NN+YIFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I              A + GVA +      L +  +   + P YR+YR
Sbjct:  331 RVFMVDRFGLLTDAMPNLLPFQTKLVQKRENLKNWDTDNE-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCERPIVMPLSNPTSRVEATPQDIIVWTEGNALVATGSPFDPVIWKDKVYPIAQCNNSYIFPGIGLGVIASGASRITDEMLMSASETLAQHSPLVKNGEGLVLPELKDIHIVSRAIAFAVGKMAQQQGVAVK-TSADALQQAIDENFWMPEYRSYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.187e-33
Identity = 86/234 (36.75%), Postives = 124/234 (52.99%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKK---------PWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +++ +VD  GL+     + L    K          W    E ++ LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T +   +W+ G A+ A+GSPF P    GK +   Q NN+YIFPG GLG++ SGA RV D+ML+AASE LA+     N  +G + P   +I+             A E GVA +    + L++      + P YRNYR
Sbjct:  330 QRVFMVDRFGLLTDGMPNLLPFQNKLVQKREQLQSWDTTSEALS-LLDVVRNVKPNILIGVSGQPGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQNILSWTDGEALVATGSPFSPVTVKGKQYPIAQCNNSYIFPGIGLGVIASGASRVTDEMLMAASETLAQHSPLVNNGEGPVLPELKDIQTVSRAIAFAVGKVAQEQGVAVK-TSAEALLQAISDNFWLPEYRNYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.187e-33
Identity = 86/238 (36.13%), Postives = 130/238 (54.62%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSS-------------RKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+                ++++LQH    W  E E V +LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF P  +  K++   Q NNAYIFPG GLG++ SGA R+ D+ML++ASE LAK        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLLTDQMPNLLSFQTKLVQKRENLQH----WDSESE-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFAPVAWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEMLMSASETLAKYSPLVLNGEGLVLPELKDIQTVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDENFWQAEYRDYR 561          
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.730e-33
Identity = 83/236 (35.17%), Postives = 127/236 (53.81%), Query Frame = -2
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN-----------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            K+   +D  GL+     D L  F+KP+A   + V +           LL+ V+  KPTILIG+S V   FT+E+++ MAS  ++P IL +SNPT+ SE   E+   W++GRA+  +GSPF P EYNG  +  GQANNA +FPG GLG +++ +  + D M  A + A+A  V         + P   ++R             A + GVAT    P+++++  +  M+ PVY+  R
Sbjct:  333 KRFWCIDRNGLLTDDM-DQLLDFQKPYARSADEVKDYQRNGDGGGIDLLEVVRQAKPTILIGTSTVSGAFTEEIVKEMASHVKRPAILPMSNPTTLSEAKPEDLIEWTEGRALITTGSPFPPVEYNGVTYHIGQANNALVFPGLGLGTIVTKSKLITDGMFEACARAIAGMV-NVGVPGAPMLPKVEDLRTVSATVAVEVAKTAMKEGVATE--EPEDIIQAVQDAMWYPVYKPIR 564          
The following BLAST results are available for this feature:
BLAST of CV884476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALNS6.798e-3539.90NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALG26.798e-3539.90NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_SALEP6.798e-3539.90NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC6.798e-3539.90NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_ENTS88.878e-3540.00NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_KLEP35.755e-3437.77NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_ENT385.755e-3436.48NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]
MAO1_KLEP72.187e-3336.75NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_CITK82.187e-3336.13NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO3_BACSU3.730e-3335.17Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884476 ID=CV884476; Name=CV884476; organism=Citrus sinensis; type=EST; length=854bp
TTTTTTTTTTTTTTTTTCACCATGTAGGCAGTGGTCCAACACCTTCATTT
GATAAGTACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATA
ACACACCAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGC
GGAGACAGAAATTTTGGCAGAACATTTAACGATAGTTTCGGTAGACAGGG
GTATACATGCAACTTTCAGCGCACTTCACTAGATTCTGAGGTCGAGGGAG
ACGCGTAGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTA
TATTGGCTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCC
TTCTCAAAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGC
CAGAAGCATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCA
AACCAAATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAA
ACTTTTCCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAAT
TGCACGACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACT
GTGAGGTTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAG
GCCATGGCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGA
TCCAATCAAAATTGTTGGCTTGATTACCTTGACAGCATCTAAGAGATTGT
TGACAGGCTCATGTTCATGAGCCCAAGGCTTCTTGAAGTGTTGAAGTGAA
TCTTTCCGGGAGCTGACTATCAGTCCCTTTGAGTCTACAAGACATATCTT
CTTC
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