CV884476

Overview
NameCV884476
Unique NameCV884476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDRDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDRDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.673e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWQAEYRDYR 561
[Close]
BLAST of CV884476 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31
Identity = 80/234 (34.19%), Postives = 130/234 (55.56%), Query Frame = -2 
Query:  179 KKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNN---------LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFSNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 853
            +K+ +VD  GL+ + +  +L  F+     + E +++         LLD V+ +KP ILIG SG    FT+E+I  M     +P+++ LSNPTS+ E T ++   W++G A+ A+GSPF+P  +  K++   Q NNA+IFPG GLG++ SGA R+ D+ML++ASE LA+        +GL+ P   +I+             A + GVA +    + L +  +   +   YR+YR
Sbjct:  330 QKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLVLPELKDIQKVSRAIAFAVGKMAQQQGVAVK-TSAEALQQAIDDNFWHAEYRDYR 561
The following BLAST results are available for this feature:
BLAST of CV884476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ESCF32.673e-3134.19NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ECOSM2.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU2.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECO8A2.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]
MAO1_ECO812.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO5E2.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO572.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO552.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO242.673e-3134.19NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAO1_ECOUT3.491e-3134.19NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884476 ID=CV884476; Name=CV884476; organism=Citrus sinensis; type=EST; length=854bp
TTTTTTTTTTTTTTTTTCACCATGTAGGCAGTGGTCCAACACCTTCATTT
GATAAGTACACATATACAGCAATACTTACACAAGTACAAAAGCCACCATA
ACACACCAAAACAAGTTATTTGACATTATTTTTGCTTAAAGACACTCAGC
GGAGACAGAAATTTTGGCAGAACATTTAACGATAGTTTCGGTAGACAGGG
GTATACATGCAACTTTCAGCGCACTTCACTAGATTCTGAGGTCGAGGGAG
ACGCGTAGCCACGCCTAGTTCATATGCCTTAGCAGCAACATTAGCAGCTA
TATTGGCTGAAATTTTTCTAATATTAGAAAATGGTGGGTAGATCAATCCC
TTCTCAAAGTTCTCTTCTGTCACTTGTTTTGCCAAGGCTTCCGAGGCTGC
CAGAAGCATGTCGTCATGTACCCGAATTGCTCCAGAGATGACCAAACCCA
AACCAAATCCAGGGAAGATGTAAGCATTGTTGGCCTGGCCAGGAACAAAA
ACTTTTCCATTGTATTCAAAAGGATCAAATGGACTTCCACTAGCGAAAAT
TGCACGACCCTTACTCCAAGTGTAAGCTTCTTCAGCTGTACATTCTGACT
GTGAGGTTGGGTTGGAGAGAGCCAGGATGAGAGGTTTCTCATTGAAGGAG
GCCATGGCCTCGATTACTTCTTTTGTAAAAGTTCTTCCAACTCCAGATGA
TCCAATCAAAATTGTTGGCTTGATTACCTTGACAGCATCTAAGAGATTGT
TGACAGGCTCATGTTCATGAGCCCAAGGCTTCTTGAAGTGTTGAAGTGAA
TCTTTCCGGGAGCTGACTATCAGTCCCTTTGAGTCTACAAGACATATCTT
CTTC
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