CV884472

Overview
NameCV884472
Unique NameCV884472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.258e-32
Identity = 82/234 (35.04%), Postives = 126/234 (53.85%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL G H+ G+  C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L +      T P V++ A  Q  FF  F++A+  +S  +PLTG +GEIR  C + N
Sbjct:   97 RGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVN 327          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.867e-32
Identity = 78/226 (34.51%), Postives = 113/226 (50.00%), Query Frame = -2
Query:  142 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 819
            +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +  ++          CP A            D  TP   DN YY+N+++ KGL+  D  L     T   VK    +   F  +F   +  + +  PLTG++GEIRK C   N
Sbjct:   99 IRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN--IDSSFAKTRQASCPSASGSGDN-NLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.867e-32
Identity = 82/235 (34.89%), Postives = 125/235 (53.19%), Query Frame = -2
Query:  142 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 828
            +L +R F  I++ K A+E+ CPG+VSC+DIL L  RD +VAL GP   ++TGRRDGR S   I E  LP   D+++ ++  F + G++   LV L G H++G  HC  L +RLY      + DP+L+ ++   +  KC            +  D G+    D +Y+  +   +GL   D  L  + +TR YV +  ++    FF +F  ++  +     LTG  GEIRK C  AN
Sbjct:   93 NLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVS--NINEVNLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKPT----DTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 80/234 (34.19%), Postives = 123/234 (52.56%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD---KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  I+ +K AVE+ CP  VSCAD+L ++ +  VV  GGP   + +GRRD  +   ++    LP  + ++ V+ ++F  +G+D P  LVAL G H+ G+  C  ++ RLY      + DP L+  ++  +  +CP    +      V  D  TP + DN YY N+ +NKGL+  D +L +      T P V+  A  Q  FF  F  A+  +   +P TG +GEIR  C + N
Sbjct:   99 RGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCP---RNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFFDAFVEAMIRMGNLSPSTGKQGEIRLNCRVVN 329          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 82/238 (34.45%), Postives = 123/238 (51.68%), Query Frame = -2
Query:  142 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRN-DRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF---KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 828
            +L ++ +  ++  K A+ER+CP ++SCAD+L L  RD V  +GGP+ P+  GRRDGR S+       LP     +  + + FA  G++A  LV L G H++G + C  +  RLY      + DP++NP +V  +  KCP     P   +   N D G+ +  D +Y++ +   KGL   D  L  D  T+ YV+  A     F    K+FS ++  L     LTG  GEIRK C   N
Sbjct:   93 NLTLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP-----PTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.969e-32
Identity = 88/243 (36.21%), Postives = 124/243 (51.03%), Query Frame = -2
Query:  130 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 816
            R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:   84 RGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 321          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.171e-31
Identity = 80/235 (34.04%), Postives = 126/235 (53.62%), Query Frame = -2
Query:  142 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 828
            +L +R F +I+ +K A+E +CPG+VSCADI+ L+ RD +VA+GGP   + TGRRDGR S        +P    + + ++  F   G+D   LV L G+H++G +HC    +RL+      + DP+L+ ++  ++  +   +I D      V  D G+    D +YYR +L  +GL   D  L  +      VK+ A  S+  FF EFS ++  +      TG+ GEIR+ C   N
Sbjct:   94 NLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIAD--NTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.530e-31
Identity = 80/232 (34.48%), Postives = 117/232 (50.43%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD   +        +P   +S+S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L   T   T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C   N
Sbjct:  105 RGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVN 333          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.530e-31
Identity = 85/232 (36.64%), Postives = 125/232 (53.88%), Query Frame = -2
Query:  142 FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 810
            F  I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY      +  P +N   +  M  +CP        DP  + Y+  D G+     +++Y  IL NK ++ VD QL  +  T+   K+ ++  + F K F+ +++ +   N LT T+GEIRK C   N
Sbjct:  108 FVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDP--LVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.610e-31
Identity = 88/243 (36.21%), Postives = 123/243 (50.62%), Query Frame = -2
Query:  130 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK---LHD 816
            R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  103 RGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 340          
The following BLAST results are available for this feature:
BLAST of CV884472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER37_ARATH5.258e-3235.04Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER4_VITVI6.867e-3234.51Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER27_ARATH6.867e-3234.89Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER2_ARMRU8.969e-3234.19Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1_ARATH8.969e-3234.45Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER1C_ARMRU8.969e-3236.21Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER39_ARATH1.171e-3134.04Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER53_ARATH1.530e-3134.48Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER26_ARATH1.530e-3136.64Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER1B_ARMRU2.610e-3136.21Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884472 ID=CV884472; Name=CV884472; organism=Citrus sinensis; type=EST; length=841bp
CCTTTTTTTGAAACCATCTTATTGGGAGCTCATCTCACACTCTTTTCTTC
CTCATAGAAGAAACAAGGAAGAAAAATTTGGAGCTATTAACTTGTTGTAG
CTAATACAGCTGTTAGCTAGCTAGGACTTGTCGTGGAGCTTGTTGGCAAG
ATTGCAAACCTTTCGGATCTCACCCTTTGTACCTGTGAGAGGGTTGTTCT
CAGAAAGGAGAGTAATGGCTCTTGAAAATTCCTTGAAGAAGTAGTCTTGA
CTCTTGGCCATCTTCTTAACATAAGGTCTTGTCCTCTTGTCGGTGGCTAG
CTGATGATCAACCATCATCAAGCCCTTGTTGTCCAATATGTTCCTATAGT
AGTTGTTGTCCAGCACCATGGGTGTGCCACGGTCATTCCTCACATACTGA
ACAGCCTTGGGGTCTGGGATTGCATCAGGACACTTATGGAGCATATGCGG
AACATGGTCAGGGTTCAGTGCAGGGTCAACTTCTGGGTACAGACGGTGCA
CCAGCTTCACACAATGAGTTCTGCCAACACTGTGAGATCCTAGCAGAGCA
ACAAGTCCAGGGGCGTCAATGCCAATGGCTGCAAACCTCTCAAGAACAAC
AGACATGCTGTCGTTGTGATCTGGGAGATACTGCTCAAGTATCTCTGCTC
TGCTTTTTCTACCATCTCTTCTTCCTGTCTTGAGAGGAATGTAAGGGCCT
CCAAGCGCAACAACGCCATCTCTACCGGACAGGACAAGAATATCAGCACA
GGAAACAACACCAGGGCACTCTCTTTCAACAGCTTCTTTGATGTTCTCAA
TGTACCTGAAGTTCCTCATAACCAAGCTCCTGTCCATCTCC
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