CV884472

Overview
NameCV884472
Unique NameCV884472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 83/238 (34.87%), Postives = 120/238 (50.42%), Query Frame = -2
Query:  142 DRSLVMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 834
            D+SL    F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H++G  HC K   R+Y       +DP LN  +   +   CP  +    A+     D  +P   DN Y++N+    GL   D  L +D+R+R  V   A S+  F + F  AIT L      TG  GEIR+ C+  N
Sbjct:   89 DKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINM---DPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.813e-31
Identity = 74/222 (33.33%), Postives = 120/222 (54.05%), Query Frame = -2
Query:  151 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE-ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL--YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQ--YVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 801
            + +IK ++E ECP  VSC+D+++L+ RD V   GGP I +  GR+D   + ++ + +  LP     +   L  FA  G+     VA++G+H++G THC  ++ R          ++P     +   CP+  P  +A +  +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  116 VGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31
Identity = 84/239 (35.15%), Postives = 125/239 (52.30%), Query Frame = -2
Query:  142 SLVMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQD-----YFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 828
            +L +R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H++G+T C+   +RLY        DP ++P  +  +   CP   P+    + V  D G+P   D ++++N+ D   ++  D +L +D  T   VKK A          F  EF +A+  +S  +  T   GE+RKVC+  N
Sbjct:   94 NLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP---PNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWSDAETNAVVKKYASRLRGLLGFRFDYEFGKAMIKMSSIDVKTDVDGEVRKVCSKVN 328          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.593e-31
Identity = 80/234 (34.19%), Postives = 120/234 (51.28%), Query Frame = -2
Query:  142 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 819
            +R F  I+ +K A+ER CP  VSCADI+ ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++ P  LVAL G H+ G+  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP   D  YY N+L+ KGL+  D  L       T P V + + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  103 VRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 9.916e-31
Identity = 85/240 (35.42%), Postives = 119/240 (49.58%), Query Frame = -2
Query:  142 EMDRSLVMRNFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 840
            E + SL    F  +   KEAV+    C   VSCADIL ++ RD V   GGP   ++ GRRDG  S A  +   LP     ++ +   FA  G+    ++AL G+H++G  HC K+ +RLY       VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:   93 EDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNI-DPRVA--INMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 9.916e-31
Identity = 81/233 (34.76%), Postives = 120/233 (51.50%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  I+ +K A+ER CPG VSCADIL ++ +  V+  GGP+ P+  GRRD  ++   +    LP    +++ +   FA +G++    LVAL G H+ GR  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP   D+ YY N+ + KGL+  D +L       T P V + +     FF+ F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  104 RGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDVVTPDAFDSQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNQYSSDMSVFFRAFIDAMIRMGNLRPLTGTQGEIRQNCRVVN 333          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.691e-30
Identity = 83/240 (34.58%), Postives = 121/240 (50.42%), Query Frame = -2
Query:  142 EMDRSLVMRNFRYIENIKEAVER--ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 840
            E + SL    F  +   KEA++    C   VSCADIL ++ RD V   GGP   ++ GR DG  S A  +   LP   D ++ +   FA  G+    ++AL G+H++G  HC K+ +R+Y      +VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD+R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:   93 EENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNI-DPRVA--INMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFTDRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.691e-30
Identity = 79/229 (34.50%), Postives = 120/229 (52.40%), Query Frame = -2
Query:  142 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 816
            R F  I+  K AVE  CPGVVSCADI+ ++ RD    +GGP   +K GRRD   +   I ++ LP+   S++ + E F   G++   LVAL G+H++G+  C+    RLY    ++D   +         +CP    D         D+ TP   DNNYYRN++  KGL+  D  L  T   T   V + +++   F  +FS A+  + +   LTG+ G+IR++C+  N
Sbjct:   94 RGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTR----KRRCPVNGGDTTLAPL---DQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.209e-30
Identity = 78/228 (34.21%), Postives = 114/228 (50.00%), Query Frame = -2
Query:  154 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 816
            R F  ++NIK A+E  CPGVVSC+DIL L+    V   GGP   +  GRRD   +        +P   + +S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L       T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C
Sbjct:   75 RGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 299          
BLAST of CV884472 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.209e-30
Identity = 78/231 (33.77%), Postives = 121/231 (52.38%), Query Frame = -2
Query:  142 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPE----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 819
            +  F  I++ K  +E  CPGVVSCADIL L+ RD V    G    + TGRRDGR S A  +   LP  +DS+++   +F+A  ++   LV L+ G H++G   C  + +R++       DP ++   VP +   CP    +      V  D G+    D +Y+ N+  N+G++  DH L T   TR  V++    +  F  +F+R++  +S     TGT GEIR+VC+  N
Sbjct:   93 LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCPQ---NGDGSARVDLDTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPATRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          
The following BLAST results are available for this feature:
BLAST of CV884472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER16_ARATH4.451e-3134.87Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER29_ARATH5.813e-3133.33Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER25_ARATH7.593e-3135.15Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER23_ARATH7.593e-3134.19Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER51_ARATH9.916e-3135.42Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER22_ARATH9.916e-3134.76Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER50_ARATH1.691e-3034.58Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER4_ARATH1.691e-3034.50Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PERA2_ARMRU2.209e-3034.21Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER62_ARATH2.209e-3033.77Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_003F08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_003_T7_F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884472 ID=CV884472; Name=CV884472; organism=Citrus sinensis; type=EST; length=841bp
CCTTTTTTTGAAACCATCTTATTGGGAGCTCATCTCACACTCTTTTCTTC
CTCATAGAAGAAACAAGGAAGAAAAATTTGGAGCTATTAACTTGTTGTAG
CTAATACAGCTGTTAGCTAGCTAGGACTTGTCGTGGAGCTTGTTGGCAAG
ATTGCAAACCTTTCGGATCTCACCCTTTGTACCTGTGAGAGGGTTGTTCT
CAGAAAGGAGAGTAATGGCTCTTGAAAATTCCTTGAAGAAGTAGTCTTGA
CTCTTGGCCATCTTCTTAACATAAGGTCTTGTCCTCTTGTCGGTGGCTAG
CTGATGATCAACCATCATCAAGCCCTTGTTGTCCAATATGTTCCTATAGT
AGTTGTTGTCCAGCACCATGGGTGTGCCACGGTCATTCCTCACATACTGA
ACAGCCTTGGGGTCTGGGATTGCATCAGGACACTTATGGAGCATATGCGG
AACATGGTCAGGGTTCAGTGCAGGGTCAACTTCTGGGTACAGACGGTGCA
CCAGCTTCACACAATGAGTTCTGCCAACACTGTGAGATCCTAGCAGAGCA
ACAAGTCCAGGGGCGTCAATGCCAATGGCTGCAAACCTCTCAAGAACAAC
AGACATGCTGTCGTTGTGATCTGGGAGATACTGCTCAAGTATCTCTGCTC
TGCTTTTTCTACCATCTCTTCTTCCTGTCTTGAGAGGAATGTAAGGGCCT
CCAAGCGCAACAACGCCATCTCTACCGGACAGGACAAGAATATCAGCACA
GGAAACAACACCAGGGCACTCTCTTTCAACAGCTTCTTTGATGTTCTCAA
TGTACCTGAAGTTCCTCATAACCAAGCTCCTGTCCATCTCC
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