EY665274

Overview
NameEY665274
Unique NameEY665274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1084
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_SHIF8 (Malate dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_SHIDS (Malate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_SHIBS (Malate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_SHIB3 (Malate dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_PSYIN (Malate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            K+A+LGAAGGIGQ LA+L+K++ P  S+L LYD+   TPGV  D+SH+ T   V GF G      A+ G D+++I A  + +P  D+   F
Sbjct:    2 KIAVLGAAGGIGQALALLLKLDLPANSILSLYDLAPVTPGVAKDLSHIPTSVKVEGFAGTDPTA-AIEGADVILISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_HAEIG (Malate dehydrogenase OS=Haemophilus influenzae (strain PittGG) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K+  P  + L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKLQLPAGTDLALYDIAPVTPGVAVDVSHIPTAVNVKGFSGEDPTP-ALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_HAEIE (Malate dehydrogenase OS=Haemophilus influenzae (strain PittEE) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K+  P  + L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKLQLPAGTDLALYDIAPVTPGVAVDVSHIPTAVNVKGFSGEDPTP-ALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_HAEI8 (Malate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K+  P  + L LYD+   TPGV  D+SH+ T   V+GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKLQLPAGTDLALYDIAPVTPGVAVDVSHIPTAVNVKGFSGEDPTP-ALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOUT (Malate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=mdh PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
[Close]
BLAST of EY665274 vs. ExPASy Swiss-Prot
Match: MDH_ECOSM (Malate dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.799e-12
Identity = 43/91 (47.25%), Postives = 57/91 (62.64%), Query Frame = 1 
Query:  220 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPARRSEEPWNDQGRSF 486
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+     AL G D+V+I A  + +P  D+   F
Sbjct:    2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE-DATPALEGADVVLISAGVARKPGMDRSDLF 91
The following BLAST results are available for this feature:
BLAST of EY665274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
MDH_SHIF86.799e-1247.25Malate dehydrogenase OS=Shigella flexneri serotype... [more]
MDH_SHIDS6.799e-1247.25Malate dehydrogenase OS=Shigella dysenteriae serot... [more]
MDH_SHIBS6.799e-1247.25Malate dehydrogenase OS=Shigella boydii serotype 4... [more]
MDH_SHIB36.799e-1247.25Malate dehydrogenase OS=Shigella boydii serotype 1... [more]
MDH_PSYIN6.799e-1245.05Malate dehydrogenase OS=Psychromonas ingrahamii (s... [more]
MDH_HAEIG6.799e-1247.25Malate dehydrogenase OS=Haemophilus influenzae (st... [more]
MDH_HAEIE6.799e-1247.25Malate dehydrogenase OS=Haemophilus influenzae (st... [more]
MDH_HAEI86.799e-1247.25Malate dehydrogenase OS=Haemophilus influenzae (st... [more]
MDH_ECOUT6.799e-1247.25Malate dehydrogenase OS=Escherichia coli (strain U... [more]
MDH_ECOSM6.799e-1247.25Malate dehydrogenase OS=Escherichia coli (strain S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-086-A09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665274 ID=EY665274; Name=EY665274; organism=Citrus sinensis; type=EST; length=1084bp
ATTTTTATATTCTAATTCAATCCATTCATTCTTTGCATGTATCATTATTG
ATCACATTCACACCACCATACTTCAACAAAGAAAATGGAGTTTAGCTCAG
AGGCTAATCAGCGCATTGCTAGAATCTCTGCTCATCTTTACCCTCCAAAT
CTCCAGATGGAGGAGAATTCTTGCTTGAGGCAAGCTAAATGCCGGGCAAA
AGGCGGGGCAGCTGGATTCAAAGTAGCCATCTTGGGTGCTGCTGGAGGCA
TTGGTCAACCCCTTGCAATGCTAATGAAGATAAACCCCCTGGTCTCAGTC
CTTCACCTCTATGATGTTGTCAATACCCCTGGTGTCACTGCTGATATTAG
CCATATGGACACCGGCGCTGTGGTACGGGGTTTCCTAGGCCAGCCACAGC
TTGAGAATGCTCTCACAGGGGTGGACCTTGTCATTATCCCTGCCCGGCGT
TCCGAGGAACCCTGGAATGACCAGGGAAGATCTTTTCAAAATCAATGCTG
GAATGGCCGGGACACTCTGTGAAGGGATCGCAAAGTGTGGCCCCAATGCG
ACTGTCAATTTGATCAGTAATCCAGGGAACTCCAAAGTTCCTTATGGCCG
CAAAGGTTTTCAAAAAAGCGGGGACTTTATGAACCAAAAAACTCCTGGGG
GAGTACAATGGGTCCAAGGCGAAAAACCCCACACATTTCGGGGGGAAAAT
TTTGGGGAACTTGGTTCCCTAGGGATGTTGGGGGTCCCGGTTTGGGGGGG
GCCATGGGGGGGAAAAAAATTTTTGGCCCCTTTTTTAAAAGAGGGTAAAA
ACCCTCCTTTGAAATTTTCTTTAAAAAAAAAAAAAAGGAAAAAACACGGA
GAAAAACCCCCCAACAAAAAAAGGGGGGGGGAAAAAAAAAAATTGTGTGG
GAAGAGGGAAAAAAAGGGGGGGGGGGGGGGGGGGGTCTGCCCCGGACACA
CCCCTTACCCCCAAATGGGGGAATTATAATGAAGGAGCCGCGACGTGGTT
TATTAAATAAATTTTTTTTTTTTGGGAAGGAGGAGAGAAACGAATGAGTA
GAGCCTCTGCCAGCGCTACCCCCTCCTCCCCTCC
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