CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHM_MOUSE (Probable histidyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Hars2 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.821e-40 Identity = 93/215 (43.26%), Postives = 137/215 (63.72%), Query Frame = -3 Query: 284 SSAKLALD---DLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF--------KGATQVGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 880 S ++LAL DL++ F+ L DK+ DLSLARGLDYYTGVI+EA+ K VGS+AAGGRYDNL+ F K VP VG+S+G+ER+F ++EQ K + +R TETQV V L ++++ELW+A +KAE Y + K++ + ++ IP MVI+GE+E NEG++KL+++ + +E I+R + V EIQ+RL++ Sbjct: 290 SQSQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVERIFYLVEQKMKMSGEKVRTTETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIGEQERNEGVIKLRSVASREEVTINRESLVAEIQKRLSE 504
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_MESAU (Histidyl-tRNA synthetase, cytoplasmic OS=Mesocricetus auratus GN=HARS PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.503e-35 Identity = 88/213 (41.31%), Postives = 130/213 (61.03%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIF----KGATQ---VGSIAAGGRYDNLIGMFGTK--QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLA-AELVSELWNAKVKAEYMVHK--KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 +N A L DL++ F+ L DK+ FDLSLARGLDYYTGVI+ A+ GA + G RYD L+GMF K +VP VG+S+G+ER+F+I+EQ + + +R TETQVLV KL + +LW+A +KAE + K K++ + E+ IP + I+GE+EL +G++KL+++ + +E + R + VEEI+RR NQ Sbjct: 291 QNKQAVEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYVAVLLQMPTGAGEEPWCGQCGCWRRYDGLVGMFDPKGRKVPCVGLSIGVERIFSIVEQRLEALEEKVRTTETQVLVASAQKKLAGGETKACLQLWDAGIKAELLYKKNPKLLNQLQYCEETGIPLVAIIGEQELKDGVIKLRSVASREEVDVRREDLVEEIRRRTNQ 503
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SCHPO (Histidyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=hts1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.964e-28 Identity = 82/238 (34.45%), Postives = 126/238 (52.94%), Query Frame = -3 Query: 290 NSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQ-------------------------VGSIAAGGRYDNLIGMFGTK---QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK------LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI----DTTQEEVISRSNFVEEIQRRL 883 NSSA A +D+ + F LE +D+ FD+SLARGLDYYTG+I+EA+ + + VGSIAAGGRYDNL+GMF K ++P VG+SLG+ER+F+I+ K ++ IRA + V V G L + +LW +KAE Y V K + D A + +P+ VI+G+ E +G V++K + ++ + +++ R V +++ L Sbjct: 300 NSSAVAAFNDMRLLFDYLEAFGVLDRFSFDMSLARGLDYYTGIIYEAVTEASAPKIKSSAEKKKSADPEADRSNDDSIGVGSIAAGGRYDNLVGMFAAKKNAKIPCVGISLGLERIFSILR--SKIPDEDIRANDVDVFVMAFGGGKEWTGFLKERMSVCKDLWANGIKAEFLYKVKPKPRQQFDAADKFDVPFAVILGQDEFAKGSVRIKQMGLKENSDEGQLVPREEMVSVLKKLL 535
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_ANTLO (Probable histidyl-tRNA synthetase, cytoplasmic OS=Antonospora locustae PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.300e-27 Identity = 76/180 (42.22%), Postives = 104/180 (57.78%), Query Frame = -3 Query: 362 SSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLI-GMFGTK---QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAEYMVHKK--VMKLIDRARESKIPWMVIVGERELNEGIVKL 880 S K +DDL + F+ L D+ V DLSLARGLDYYTGVIFEA VGS+A GGRYDNL+ + G K VP VG SLG+ R+ ++M ++ + R TET+V VG G L ++S LW A V AE +K L++ R++ IP+ ++VGE+E+ E +L Sbjct: 237 SDGKKGIDDLALLFKYLGIYGVGDRAVVDLSLARGLDYYTGVIFEAALVDFKDVGSVAGGGRYDNLVSSVLGKKSEWSVPCVGFSLGVTRILSVMLKVDRR-----RTTETEVFVGSSGGLLLEERMGVLSRLWRAGVAAETFYTRKYGYASLMEHVRKTDIPFFLLVGEKEIAENRFRL 411
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CAEEL (Histidyl-tRNA synthetase OS=Caenorhabditis elegans GN=hrs-1 PE=2 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 9.535e-27 Identity = 80/219 (36.53%), Postives = 118/219 (53.88%), Query Frame = -3 Query: 290 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQ----------------VGSIAAGGRYDNLIGMFGTK-QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 886 +N K ++L++ + L + V ++ SLARGLDYYTG I+EA+ A + VGS+AAGGRYD L+ MF +K VP GVS GIER+F IME QK IR T+T+V V L +LV L +A +K E + + K++ A E +IP +++GE+EL +G+VKL+N+ T E+ I + ++ L Sbjct: 304 QNDKFKKGAEELKVLIEYLNVDG-VTTVRYEPSLARGLDYYTGAIYEAVAPKALEGTAVENSEDTAGQPVGVGSVAAGGRYDGLVKMFDSKANVPCCGVSFGIERLFAIMEARQKVA---IRTTQTEVYVASAQKNLVRDRKKLVKMLRSAGIKTEMALKANPKLLTQFQYAEERRIPLAIVIGEQELKDGVVKLRNVVTRDEQTIKLDQLITAVRDTL 518
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_YEAST (Histidyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=HTS1 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 6.180e-26 Identity = 80/240 (33.33%), Postives = 122/240 (50.83%), Query Frame = -3 Query: 284 NSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQ----------------------VGSIAAGGRYDNLIGMFG------TKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG------DKLPLAAELVSELWNAKVKAEYMVHKKV--MKLIDRARESKIPWMVIVGERELNEGIVKLKNID----TTQEEVISRSNFVEEIQRRLNQ 883 N AK LDD+ + E + FDLSLARGLDYYTG+I+E + + VGSIAAGGRYDNL+ MF + Q+P VG+S G+ER+F++++Q + + I+ T TQV V G LP ++ +LW+A ++AEY+ K K D A ++ VI+G+ E EG +++K + E++S ++ V +Q +L+Q Sbjct: 292 NEKAKQGLDDIATLMKYTEAFDIDSFISFDLSLARGLDYYTGLIYEVVTSASAPPENASELKKKAKSAEDASEFVGVGSIAAGGRYDNLVNMFSEASGKKSTQIPCVGISFGVERIFSLIKQ-RINSSTTIKPTATQVFVMAFGGGKDWTGYLPERMKVTKQLWDAGIEAEYVYKAKANPRKQFDAAEKAGCHIAVILGKEEYLEGKLRVKRLGQEFADDDGELVSAADIVPIVQEKLSQ 530
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BACTN (Histidyl-tRNA synthetase OS=Bacteroides thetaiotaomicron GN=hisS PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.924e-25 Identity = 67/189 (35.45%), Postives = 111/189 (58.73%), Query Frame = -3 Query: 302 LDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 862 +++ E LE +++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG V VG+S G +R+F ++ Q++ + + TE ++ GDK + +++++ A ++AE + K+ K + A +P++ IVGE E+NEG LKN++T ++ ++S VEE+ Sbjct: 267 VEESEFILGTLETMGLKNEIELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNGTE--LMFVNFGDKEAAFSMSMLAKVRAAGIRAEIFPDAAKMKKQMSYANAKSVPFVAIVGENEMNEGKAMLKNMETGEQNLVS----VEEL 448
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BACV8 (Histidyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=hisS PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.597e-24 Identity = 69/191 (36.13%), Postives = 111/191 (58.12%), Query Frame = -3 Query: 326 LENSSAKL-ALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVIS 889 L S A L +++ E + + +V DL+LARGL+YYTG IFE + Q+GSI+ GGRYDNL G+FG + VG+S G +R+F ++ Q+ + + TE +L GDK +++++ A V+AE Y K+ K + A + +IP++ IVGE E+NEG + LKN+ T ++ +++ Sbjct: 257 LATSEAGLKGVEESEFILKTVSALGVKSEVELDLTLARGLNYYTGAIFE-VKALDVQIGSISGGGRYDNLTGVFGMDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTE--LLFVNFGDKEAAYCLPILTKVREAGVRAEIYPDASKMKKQMGYANDKQIPFVAIVGENEMNEGKLTLKNMTTGEQSLVT 444
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BACFR (Histidyl-tRNA synthetase OS=Bacteroides fragilis GN=hisS PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24 Identity = 68/202 (33.66%), Postives = 115/202 (56.93%), Query Frame = -3 Query: 311 SSAKLALDDLEIFFQALEKSKCI----------DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFV 880 ++ K L D E + +E+S+ I +++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG V VG+S G +R+F ++ Q++ + + TQ+L G+K + ++S+ A ++AE + K+ K + A IP++ IVGE E+NEG LKN+++ ++++++ + Sbjct: 251 ATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNG--TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEELI 449
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BACFN (Histidyl-tRNA synthetase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=hisS PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.784e-24 Identity = 68/202 (33.66%), Postives = 115/202 (56.93%), Query Frame = -3 Query: 311 SSAKLALDDLEIFFQALEKSKCI----------DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFV 880 ++ K L D E + +E+S+ I +++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG V VG+S G +R+F ++ Q++ + + TQ+L G+K + ++S+ A ++AE + K+ K + A IP++ IVGE E+NEG LKN+++ ++++++ + Sbjct: 251 ATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNG--TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGENEMNEGKAMLKNMESGEQQLVTAEELI 449 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |