CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEPC (Histidyl-tRNA synthetase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=hisS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15 Identity = 57/171 (33.33%), Postives = 93/171 (54.39%), Query Frame = -3 Query: 296 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV---GLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI--DTTQEEVI--SRSNFVEEIQR 787 L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E + ++ I A + V L + + +A EL S L + KV + + V K + RA +S +++GE EL EG+V +K++ D Q++V + S F+ E+ + Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLGLTQD-IPAAVDVYVTAMGENCLVEAIKVAQELRSALPHLKVMS-HCGGGNVKKQMKRADKSGASVALLIGEEELAEGMVTVKHLRNDNEQQQVARNALSAFLAELTK 425
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_NANEQ (Histidyl-tRNA synthetase OS=Nanoarchaeum equitans GN=hisS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15 Identity = 55/190 (28.95%), Postives = 101/190 (53.16%), Query Frame = -3 Query: 299 FFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAE--------YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 844 F++ ++ + +K+ D+ LARG DYYTG+++E +G + ++ GGRYDNLIG+F +++PAVG S+GI + + ++K + + T TQ+ V + E+ E W K ++ + K ++ E I ++VIVG+++L +V ++ T + + I N +EEI+ Sbjct: 224 FWEIIDLVEKKNKIKIDIKLARGFDYYTGMVYEVWIEGFNR--ALGGGGRYDNLIGIFSKEKIPAVGGSIGINPLIDV--GLEKGIFNLNKKTYTQIAV--------IYIEVFKEAWRIANKLRDLGLNVYIDLLRRDFKKQMEYVIEKDIRYLVIVGKKDLANNLVTFQDRLTRERKKIPIEN-LEEIK 400
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_MOOTA (Histidyl-tRNA synthetase OS=Moorella thermoacetica (strain ATCC 39073) GN=hisS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.203e-15 Identity = 67/186 (36.02%), Postives = 94/186 (50.54%), Query Frame = -3 Query: 332 SAKLALDDLEIFFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEYMVHKKVMK-LIDRARESKIPWMVIVGERELNEGIVKLKNIDT-TQEEV 877 +A L D F + E K + + + D L RGLDYYT FE + KG SI GGRYD L+ G KQVP +G LG+ERV +E IQ + + VLV G + LAA L++ L A ++A+ ++ +K + A VI+GE EL G V ++ +D +QEEV Sbjct: 224 TASLCPDCAGHFHRVQEYLKALGIEFILDEHLVRGLDYYTKTAFEIMVKGIGAQSSIGGGGRYDGLVAALGGKQVPGIGFGLGLERVLLALE-IQGQEPPPEGGVD--VLVVTAGTGVDLAAFRLLAGLRAAGIRADKDYLERSLKGQMKYANRYPARMAVILGEEELARGRVSVRRLDAGSQEEV 406
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_LEPBP (Histidyl-tRNA synthetase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=hisS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 56/188 (29.79%), Postives = 92/188 (48.94%), Query Frame = -3 Query: 284 FQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 841 F+ ++ D + FD S+ RG DYYTG IFE S+ GGRYDNLIG+F +++ +G LG T+ + A++T V + LL D EL K+ AE +V +K+ K + A + W+++ GE E+ V LK++ + + S S +++I+ L++ Sbjct: 253 FEDIKTIGLSDIIHFDPSVVRGFDYYTGFIFEIFDTSPQNKRSLYGGGRYDNLIGLFSNEELTGIGFGLG---DVTLQNFLTAHNLLPNFASDTTVFIPLLDDSSFAENHNFAKELRKEKISAEVSLVSQKMGKQLSYAEKKGYRWILLRGEDEIKTNTVTLKDMASRNQFTFSFSEALQKIKEELSK 437
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_LEPBA (Histidyl-tRNA synthetase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=hisS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 56/188 (29.79%), Postives = 92/188 (48.94%), Query Frame = -3 Query: 284 FQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 841 F+ ++ D + FD S+ RG DYYTG IFE S+ GGRYDNLIG+F +++ +G LG T+ + A++T V + LL D EL K+ AE +V +K+ K + A + W+++ GE E+ V LK++ + + S S +++I+ L++ Sbjct: 253 FEDIKTIGLSDIIHFDPSVVRGFDYYTGFIFEIFDTSPQNKRSLYGGGRYDNLIGLFSNEELTGIGFGLG---DVTLQNFLTAHNLLPNFASDTTVFIPLLDDSSFAENHNFAKELRKEKISAEVSLVSQKMGKQLSYAEKKGYRWILLRGEDEIKTNTVTLKDMASRNQFTFSFSEALQKIKEELSK 437
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ANATD (Histidyl-tRNA synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=hisS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 49/173 (28.32%), Postives = 89/173 (51.45%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQ--IQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 D + RGLDYYT +FE + + + +I GGRYDNLI G + +G ++G+ER+ ++EQ + R+Q+ R + + +A L E + V+ K MK D+ + +I+G+ E+ +G+ K++N+ T+ EE++ N E ++ +L + Sbjct: 252 DPFIVRGLDYYTKTVFEIVATVSDKELAICGGGRYDNLIEQIGGPSIAGIGFAIGVERLLMLLEQNGLLPARSQVPRVFVATIGENGIKKAFEIARMLRFEGISTVVEEMGRSLKSQMKYADKI---GCEFSIIIGDDEIEKGVCKVRNMKTSSEEIVEIENICEYLKEKLQK 421
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH1_BACCR (Histidyl-tRNA synthetase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=hisS-1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 52/162 (32.10%), Postives = 88/162 (54.32%), Query Frame = -3 Query: 338 DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 811 + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q + I +T V + LG +L A+ + + KV+ E + +K+ + ++ A + IP+++I+GE EL+ V L+N+ E Sbjct: 260 ENTIFNPFLARGLTMYTGTVYEIFLKDRSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETISST-ADVFIIPLGTELQCLQIAQQLRSTTSLKVELE-LAGRKLKRALNYANKENIPYVLIIGEDELSTNTVVLRNMKEGSE 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH1_BACC1 (Histidyl-tRNA synthetase 1 OS=Bacillus cereus (strain ATCC 10987) GN=hisS1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.877e-15 Identity = 53/169 (31.36%), Postives = 91/169 (53.85%), Query Frame = -3 Query: 317 DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 811 + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q + I +T V + LG +L A+ + + KV+ E + +K+ + ++ A + IP+++I+GE EL+ V L+N+ E + S+ Sbjct: 259 ENAIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETISST-ADVFIIPLGTELQCLQIAQQLRSTTSLKVELE-LAGRKLKRALNYANKENIPYVLIIGEDELSTETVVLRNMKEGSEVKVPLSS 420
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PYRCJ (Histidyl-tRNA synthetase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=hisS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.758e-15 Identity = 50/171 (29.24%), Postives = 101/171 (59.06%), Query Frame = -3 Query: 338 FFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTI--MEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 844 F + LE + +++++FDLS+ RGLDYYTGV+FEA F G ++ ++ GGRYD+L+ ++ + PA+G ++G+ER+ ++ ++K + I + + +A EL + ++A V+ + K + + + ++VI+G++EL +G+VK++++ +E Sbjct: 248 FVKYLEAAVGLERLIFDLSIVRGLDYYTGVVFEA-FAGEYKL-AVGGGGRYDDLLQLYSGVKTPALGFAIGVERLMEAVGLQAVEKPLDYYIYIFDESA----YQTAIYIARELRRKGYSAVVE---LGDKGLKDAFEYVLKIGTRFLVILGKKELEKGVVKVRDLQKREE 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_JANSC (Histidyl-tRNA synthetase OS=Jannaschia sp. (strain CCS1) GN=hisS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.758e-15 Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = -3 Query: 353 DKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG-DKLPLAAELVSELWNAKVKAE-YMVHKK----VMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 811 D+++ D S+ RGL YYTG ++EA KG T Q GS+A GGRYD+L+ F ++VPA GVS+G++R+ + K + + V+V ++ D++ +V+ L NA ++AE Y+ + K +K D+ R P +I G E G+V+LK++ Sbjct: 305 DRIIIDPSVVRGLGYYTGPVYEAELTFDVQNEKGQTVQFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALHATGKLKGE----DAGPVIVTVMDRDRMAEYQAMVATLRNAGIRAEVYLGNPKNFGNQLKYADKRRS---PVAIIQGSDEAARGVVQLKDL 464 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |