CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_MICLC (Histidyl-tRNA synthetase OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=hisS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15 Identity = 55/177 (31.07%), Postives = 94/177 (53.11%), Query Frame = -3 Query: 284 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAK-VKAEYMVH-KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 808 + V DLS+ARGLDYYTG ++E + G Q+GSI +GGRYD L G + P VG+S+G+ R+ +M + ++ R+ T V V L D+ A+ V+ L + + AE V +K + I A IP++ +G + + ++K+I + ++ +++ + L Q Sbjct: 279 RAVADLSIARGLDYYTGTVYETVLVGHEQLGSICSGGRYDALASK-GNRVFPGVGLSIGVTRL--VMRMLSQQMAVASRSVPTAVYVALTADEDWSEAQDVAALLRERGIPAEVAVSAEKFGRQIKYADRRGIPFVWFMGRDDAGARVHEVKDIRSGEQHAADPADWTPPAEDLLPQ 452
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BIFA0 (Histidyl-tRNA synthetase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=hisS PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.908e-15 Identity = 63/185 (34.05%), Postives = 94/185 (50.81%), Query Frame = -3 Query: 347 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGL-----LGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDT 886 E + AK LD L + + + V+ DL +ARGLDYYTG ++E +GA+ +GSI +GGRYDNL G ++ P VG+S+G+ R+ + M + + R + VLV + GD +A L S A V K+ K I A + IP++ E N+G ++KNI T Sbjct: 260 EYAMAKEGLDTLSMIIDEARRIRP-GSVMADLKIARGLDYYTGSVYETFLEGASDLGSICSGGRYDNLATQ-GNRKYPGVGLSIGLSRLVSYM--LHRAGATASRMSPACVLVAVWDEENRGDSNAIANTLRSRGIAADVAP---TAAKLGKQIKYADKLGIPYVWFPNENPENDGSDEVKNIIT 437
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEHH (Histidyl-tRNA synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=hisS PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15 Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = -3 Query: 323 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEYMVH------KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISR 787 L RGLDYY +FE + G++ AGGRYD L+G G K PAVG ++G+ER+ ++E ++ +++ V V +GD + A ++ EL + A+ M H KK MK RA +S +++GE EL V +K++ + +E+++R Sbjct: 257 LVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVGQLGGKPTPAVGFAMGLERIVLLLETLELDKD---IGPSVDVYVTAMGDNCRVEAIKIAQELRASLPTAKVMSHCGGGNFKKQMK---RADKSGATVALVIGEDELANNQVAVKHLREDKAQELVAR 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH1_BACCZ (Histidyl-tRNA synthetase 1 OS=Bacillus cereus (strain ZK / E33L) GN=hisS1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.372e-15 Identity = 50/169 (29.59%), Postives = 90/169 (53.25%), Query Frame = -3 Query: 317 DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 811 + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q + I +T + + +G +L A+ + + KV+ E + +K+ + ++ A + IP+++I+GE EL+ L+N+ E + S+ Sbjct: 259 ENAIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETISST-ADIFIIPIGTELQCLQIAQQLRSTTSLKVELE-LTGRKLKRALNYANKENIPYVLIIGEEELSTETAMLRNMKEGSEVKVPLSS 420
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THESQ (Histidyl-tRNA synthetase OS=Thermotoga sp. (strain RQ2) GN=hisS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 56/175 (32.00%), Postives = 89/175 (50.86%), Query Frame = -3 Query: 284 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 802 V D +L RGLDYYT +FE +G +IA GGRYD L G VPA+G + GIER I+ ++ E +I V + LG+K + L EL + + ++ +K+ + A + VI+G+ EL +GIV L++++T + I R + I R+++ Sbjct: 248 VEDHTLVRGLDYYTRTVFEVRHEGLGAQSAIAGGGRYDGLFAELGGSSVPALGFAGGIER---IILALKAEGIEIPMKNVHLVYIATLGEKAFMDGVRLAGELRKKGLSVDVDIMDRKLSGQLKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAERVSK 419
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THEMA (Histidyl-tRNA synthetase OS=Thermotoga maritima GN=hisS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 56/175 (32.00%), Postives = 89/175 (50.86%), Query Frame = -3 Query: 284 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 802 V D +L RGLDYYT +FE +G +IA GGRYD L G VPA+G + GIER I+ ++ E +I V + LG+K + L EL + + ++ +K+ + A + VI+G+ EL +GIV L++++T + I R + I R+++ Sbjct: 248 VEDHTLVRGLDYYTRTVFEVRHEGLGAQSAIAGGGRYDGLFAELGGSSVPALGFAGGIER---IILALKAEGIEIPMKNVHLVYIATLGEKAFMDGVRLAGELRKKGLSVDVDIMDRKLSGQLKHASRMGSRYAVIIGDEELEKGIVILRDLETGDQVEIDRDFAADYIAERVSK 419
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METTH (Histidyl-tRNA synthetase OS=Methanobacterium thermoautotrophicum GN=hisS PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 54/194 (27.84%), Postives = 96/194 (49.48%), Query Frame = -3 Query: 293 ALDDLEIFFQALEKSKC--IDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVH-KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRR 865 +L+ LE F + +E +D +L +ARGLDYYTG++FE I GG Y NL+ FG ++V + G + G +R+ + ++ + ++ + +P A + EL A V A+ V +K+ K + A + V+ GERE+ +G V +K+++ +E + R V++I+ R Sbjct: 237 SLEALEEFRELVETLHYFGVDDYHVNLGIARGLDYYTGIVFEIYVPELGAQKQICGGGTY-NLVETFGGERVESTGFAFGFDRLMNALGMDEENMRMV-----DVFVIPIQDSTVPEAIRITQELRAAGVSADLEVSGRKLRKALSHADNLGARFAVLTGEREIQDGKVTVKDMERNSQETLPRDEMVDKIKGR 424
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_DINSH (Histidyl-tRNA synthetase OS=Dinoroseobacter shibae (strain DFL 12) GN=hisS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 56/164 (34.15%), Postives = 88/164 (53.66%), Query Frame = -3 Query: 353 DKVVFDLSLARGLDYYTGVIFEAIF-------KGAT-QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG-DKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 811 D++V D S+ RGL YYTG +FEA KG T Q GS+A GGRYD+L+ F + VPA GVS+G++R+ + + + Q A V+V ++ D++ +V L +A ++AE + K + A + P VI G E G+V++K++ Sbjct: 297 DRIVIDPSVVRGLGYYTGPVFEAELTFEVQNDKGQTVQFGSVAGGGRYDDLVKRFTGQAVPATGVSIGVDRLLAAL----RAKGQAQTAAPGPVIVTVMDRDRIADYQAMVGTLRDAGIRAELYLGNPKNFGNQLKYADKRAAPVAVIQGSDEAARGVVQIKDL 456
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_AERPE (Histidyl-tRNA synthetase OS=Aeropyrum pernix GN=hisS PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 60/200 (30.00%), Postives = 94/200 (47.00%), Query Frame = -3 Query: 290 NSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESK--IPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 883 N + ALD LE + + V D+SL RGLDYYTG I E + ++GS+A GGRYD L+GMF + +PA GVS+GIER+ I ++ + T QV V +L + A + + + + + R + S+ IP + VG +E G + L + + + V+ ++R L Sbjct: 241 NEKVREALDHLEEMLSLADDKR----VELDMSLVRGLDYYTGPILEVVLD-EPRIGSVAGGGRYDGLVGMFAGRDIPATGVSIGIERI--IDAGLELGVYSLDVKTVAQVAVVVLDRRYYRYAWEAARILRRGGLNVRIDLSRASGQVQRRKASRLGIPVLAFVGAKEAEGGFLTLYSAAKGERVAVPLGEAVKAVERLL 433
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH1_BACHK (Histidyl-tRNA synthetase 1 OS=Bacillus thuringiensis subsp. konkukian GN=hisS1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 50/169 (29.59%), Postives = 90/169 (53.25%), Query Frame = -3 Query: 317 DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 811 + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q + + +T V + LG +L A+ + + K++ E + +K+ + ++ A + IP+++I+GE E+ V L+N+ E + S+ Sbjct: 259 ENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDNMNYPTVGISFGLDVIYTALSQ-----KETVSST-ADVFIIPLGTELQCLQIAQQLRSTTSLKIELE-LAGRKLKRALNYANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSS 420 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |