CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH1_BACAN (Histidyl-tRNA synthetase 1 OS=Bacillus anthracis GN=hisS-1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14 Identity = 51/169 (30.18%), Postives = 90/169 (53.25%), Query Frame = -3 Query: 317 DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL--AAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 811 + +F+ LARGL YTG ++E K + SI +GGRYDN+IG F P VG+S G++ ++T + Q + I +T V + LG +L A+ + + K++ E + +K+ + ++ A + IP+++I+GE E+ V L+N+ E + S+ Sbjct: 259 ENTIFNPFLARGLTMYTGTVYEIFLKDGSITSSIGSGGRYDNIIGAFRGDDMSYPTVGISFGLDVIYTALSQ-----KETISST-ADVFIIPLGTELQCLQIAQQLRSTTSLKIELE-LAGRKLKRALNYANKENIPYVLIIGEEEICTETVMLRNMKEGSEVKVPLSS 420
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THETN (Histidyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=hisS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = -3 Query: 290 DDLEIFFQALEK---SKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELW--NAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 859 DD F+ L+K + D +V D + RGLDYYT FE I K G++ GGRYD LI G +P VG +GIER+ +EQ +I + + + +GD+ L L ++L KV+ ++M + + + A + + V++GE EL VKLKN+ T +E I ++EI++ + Sbjct: 229 DDCRNHFEELKKYLDAMGYDYIV-DPRIVRGLDYYTKTAFEIISKDIGAQGTVCGGGRYDGLIEECGGPSMPGVGFGMGIERLLLTLEQ---NGIEIPKPEGPDLFIAYIGDEAKLFTFTLANKLRFNGLKVEIDHM-ERSLKAQMKYANKLNAKFAVVIGEEELESKKVKLKNMATGEETEI----LIDEIEKAI 415
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THEP1 (Histidyl-tRNA synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=hisS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 59/178 (33.15%), Postives = 92/178 (51.69%), Query Frame = -3 Query: 284 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 802 V D +L RGLDYYT +FE +G +IA GGRYD L G VPA+G + GIER I+ ++ E +I V V LG+K + LA EL + + V ++ +K+ + A + VI+G+ EL +GIV L++++T + + R V+ I R+++ Sbjct: 248 VEDHTLVRGLDYYTRTVFEVRHEGLGAQNTIAGGGRYDGLFVELGGSSVPALGFAGGIER---IILALKAEEIEIPIKNVHLVYVVTLGEKAFADGVQLAVELRKKGLSVDVD---IMDRKLSGQLKHAHRMGSRYAVIIGDEELEKGIVILRDLETGDQVEVDRDFAVDYIAERVSK 419
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ROSDO (Histidyl-tRNA synthetase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=hisS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 66/208 (31.73%), Postives = 110/208 (52.88%), Query Frame = -3 Query: 284 KLALDDLEIFFQALEK-SKCIDKVVFDLSLARGLDYYTGVIFEAIF-------KGATQ-VGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLG-DKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 871 K +D+LE + L S D++V D S+ RGL YYTG ++EA KG T+ GS+A GGRYD+L+ F ++VPA GVS+G++R+ + + ++ V+V ++ D++ +V+EL A ++AE + K + A P VI G E +G+V++K++ E I++S +EE + R +Q Sbjct: 295 KEGVDELEKISELLSAGSYGPDRIVIDPSVVRGLGYYTGPVYEAELTFEIQDDKGRTRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALH----AKGRLDTTDVGPVVVTVMDRDRMADYQAMVAELRQAGIRAEVYLGNPKNFGNQLKYADTRNSPVAVIEGGDEHEKGVVQIKDLILGAE--IAKSATLEEWKDRPSQ 496
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_HELMI (Histidyl-tRNA synthetase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=hisS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 58/165 (35.15%), Postives = 86/165 (52.12%), Query Frame = -3 Query: 329 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQ----VLVGLLGD-KLPLAAELVSEL--WNAKVKAEYMVH--KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 796 D L RGLDYYT FE + + SI GGRYD+L+ G VP +G LG+ERV M +NQ + +++ + + L G+ P+A L +L V+ +Y+ K MK DR R +P++VIVGE EL EG + L+ + T +++ I Sbjct: 252 DDRLVRGLDYYTKTAFEIVSRDIGAQSSIGGGGRYDHLVEALGGPPVPGIGFGLGLERVLLTM------KNQGLLDADSREQRDLFIALAGEGTQPVAFGLAQKLRQRGVAVEMDYLERSLKAQMKTADRFR---VPYVVIVGEGELKEGKLTLRTMATGEQQQI 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ANAPZ (Histidyl-tRNA synthetase OS=Anaplasma phagocytophilum (strain HZ) GN=hisS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.428e-14 Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = -3 Query: 299 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 787 L RGLDYYTG +FE +I AGGRYDNL+ G + VPA+G + G+ER+ +M + + + ++ +V + + E+ L +V + + K I RA K +I+G+ E+N V KN+ T ++E IS SN E ++ Sbjct: 256 LVRGLDYYTGTVFEYKTSSLGAQDAIIAGGRYDNLVAAMGGENVPAIGFAGGVERLAALMSYSRTRKFCVFILPISEEVV---SHAMRITYEIRRTLSGVQVICDIVTRLKTG--IKRADRQKADIALILGDEEVNRNAVSCKNMLTGKQEEISISNITEYLK 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THEAB (Histidyl-tRNA synthetase OS=Thermosipho africanus (strain TCF52B) GN=hisS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14 Identity = 52/168 (30.95%), Postives = 85/168 (50.60%), Query Frame = -3 Query: 311 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEYMVHKKVMKL-IDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFV 808 K V D L RGLDYY GV+FE ++ GGRYD LI G Q P++G ++GIER ++ ++ E+ + ++ V LG++ + A ++ +L + + + ++ + + A K VIVGE EL IV L+N++T ++ I R V Sbjct: 245 KYVEDPLLVRGLDYYNGVVFEIHHGDLGAQSAVGGGGRYDKLIKELGGSQTPSLGFAMGIER---LIIALKNEKIPVEEIKNNEIFVAHLGEQARIEALKIAEDLRDNGISVVFSTMERGLSAQLKHAARLKCKLCVIVGENELERNIVILRNMETGEQIEIERDYVV 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SULAC (Histidyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=hisS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14 Identity = 52/165 (31.52%), Postives = 88/165 (53.33%), Query Frame = -3 Query: 329 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQI----QKERNQIIRATETQVLVGLLGDKLPLAAELVSEL-WNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 808 K+ DL RGL YYTGVIFE I + SIA GGRYDNL+ ++G PA+G ++G+ER ++ +I Q+++ +I T+ D L LA L++ L N + + + KL+ E +V++G++EL E + +K ++ +++ + Sbjct: 259 KIKIDLGFVRGLAYYTGVIFEVIHPDVSF--SIAGGGRYDNLVRLYGGADTPAIGFAIGVERTALVINKIKSDLQRKKIAVIPLISTK-------DSLSLAIRLLNILRKNNIIGVLNLKDVPLSKLMTYYVEEGYNAIVLIGKKELEENSITIKFLEKREQKTV 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_LACAC (Histidyl-tRNA synthetase OS=Lactobacillus acidophilus GN=hisS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14 Identity = 59/205 (28.78%), Postives = 105/205 (51.22%), Query Frame = -3 Query: 299 DDLEIFFQALEKSKCIDKV----VFDLSLARGLDYYTGVIFE------AIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAEYMVHKKVMKL-IDRARESKIPWMVIVGERELNEGIVKL------KNIDTTQEEVISRSNFVEEIQ 859 DD + F+++ K +D++ V D L RGLDYYTGVIFE ++++ AT +I GGRYD+L+ F PAVG +G ER+ ++E K+ + + + +G+ A E+ L +A++ V++K +K +A +++ +GE+EL G++ + K ID + E++ S + E++ Sbjct: 231 DDTKNNFESI--LKMLDQLGIDYVIDDDLVRGLDYYTGVIFEFMVEDKSLWESAT---TILGGGRYDHLVEEFNGPATPAVGFGIGEERLMLVLE---KQNPALFESNSIDFFIANIGEGTAQKAIEITRSLRKQGFEADFDVNQKKLKAQFKKADRDHAKYVITLGEKELENGVLNIKRLSDGKTIDLSLEDINDMSKVMGELK 427
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_COXBU (Histidyl-tRNA synthetase OS=Coxiella burnetii GN=hisS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14 Identity = 49/165 (29.70%), Postives = 88/165 (53.33%), Query Frame = -3 Query: 311 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQI----IRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRSNFV 790 +L RGLDYYT +FE + G++ AGGRYDNL+ + G K PA G + G+ER+ ++ +Q+ ++I + A E + GLL + +L + L ++A+ + + RA +S W +++GE E+ V LK++ +T ++ ++R + Sbjct: 256 TLVRGLDYYTHTVFEWVTDQLGAQGTVCAGGRYDNLVELLGGKSTPAAGFAAGLERLVLLLRGVQECLDKIDIYVVIAGEAVIQEGLL-----MTEQLRNVLPEWVIEAD-LSGSSLKSQFKRADKSGAKWALVIGEEEIKTNTVTLKHLRETVPQKSLTRDTLI 414 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |