CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THENV (Histidyl-tRNA synthetase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 46/161 (28.57%), Postives = 94/161 (58.39%), Query Frame = -3 Query: 338 IDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTI--MEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 814 +D++ FD+S+ RGLDYYTGV+FEA + G ++ ++ GGRYD+L+ ++ ++PA+G ++G+ER+ +E+++K + I + G + LA +L + + ++ + K + + + +++I+G REL G+VK++++ +E Sbjct: 258 VDRLRFDMSIVRGLDYYTGVVFEA-YVGKYRL-AVGGGGRYDDLLELYSGVKMPALGFAIGVERLMEAVGLERVEKPLDYYIYIFDD----GAYPHAVALAKKLRAAGHSVAIE---LGEKNLKDAFEYILKVGTKYLIIMGRRELERGVVKIRDLQRREE 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SULNB (Histidyl-tRNA synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 55/163 (33.74%), Postives = 81/163 (49.69%), Query Frame = -3 Query: 329 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNA-----KVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 796 D +L RGLDYY FE + +IA GGRYD L+ K PAVG ++GIER+ ++++ ET+ +G +P A E + L N KV EY K MK +D+A + +++GE EL G V LK+++T +E+ I Sbjct: 250 DTNLVRGLDYYNKTAFEFVSNEIGSQSAIAGGGRYDKLVEYLDGKPTPAVGFAIGIERIM-----------ELVQMPETKKEGYYMGAMIPEAIEKIIMLGNRKRATDKVTVEYSSKGFKSHMKGVDKANAR---YALLIGEDELKNGTVWLKDLETKEEKSI 398
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRPM (Histidyl-tRNA synthetase OS=Streptococcus pyogenes serotype M28 GN=hisS PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 56/161 (34.78%), Postives = 80/161 (49.69%), Query Frame = -3 Query: 326 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVIS 802 V D ++ RGLDYY IFE I +I AGGRYD+L+G FG + P G LG+ER+ I I+K+ + TE V + +LGD A ELV + AE + +K+ A K ++ +GE E+ G +KN + QE +S Sbjct: 252 VIDTNMVRGLDYYNHTIFEFITSVEGSDLTICAGGRYDSLVGYFGGPETPGFGFGLGLERLLMI---IEKQGITLPIETEMDVYLAVLGDSANSKALELVQAIRRQGFTAERDYLGRKIKAQFKSADTFKAKLVMTLGESEVEAGKAVIKNNRSRQEVEVS 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEPA (Histidyl-tRNA synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = -3 Query: 323 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEYMVH------KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISR 787 L RGLDYY +FE + G++ AGGRYD L+G G K PAVG ++G+ER+ +++ ++ +++ V V +GD + A ++ EL + A+ M H KK MK RA +S +++GE EL V +K++ + +E+++R Sbjct: 257 LVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVGQLGGKPTPAVGFAMGLERIVLLLQTLELDKD---IGPAVDVYVTAMGDNCKVEAIKIAQELRASLPTAKVMSHCGGGNFKKQMK---RADKSGACVALVIGEDELANNQVAVKHLREDKAQELVAR 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PICTO (Histidyl-tRNA synthetase OS=Picrophilus torridus GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 54/180 (30.00%), Postives = 98/180 (54.44%), Query Frame = -3 Query: 302 ALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERN-QIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARES-KIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 835 AL K+ DLS+ RGL YYTG++FEA F + ++ +I GGRYDNL +F + +PAVG ++G ++E + K N + + V + E+++++ + A V+K+ M+ I + ES K +++I+G+REL+ + +KN+ T ++ ++ +F+ I Sbjct: 247 ALTSKYTKSKLNIDLSVVRGLSYYTGIVFEA-FDISGELRAILGGGRYDNLSNLFINESIPAVGFAIG----DAVIELLLKRNNLWNYKDKRKRYYVVNISSSPEAHIEILNKIRGSGNIAISEVNKRRMQTIIKYAESIKCDFLIIIGDRELSSKKMTIKNLRTQEQAEMNIDDFINNI 421
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_COLP3 (Histidyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = -3 Query: 335 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKV-KAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 802 V + L RGLDYY +FE + G+I AGGRYD L+ G K PA G +LGIER+ ++ +++K N IR + V +LGD +AA ++E W +V + H + K + RA +S +I+G+ E+ + V +K + +E+ Sbjct: 254 VLNERLVRGLDYYNRTVFEWVTTTLGAQGTICAGGRYDGLVEQLGGKATPAFGFALGIERLVLMLTELEKVTN--IR-PQVDAYVVILGDDAQVAANKLAEQWRDQVPEIRLQCHCGGGNMKKQLKRADKSGAQIALILGDDEITQEKVMVKYLRGQKEQ 410
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CLONN (Histidyl-tRNA synthetase OS=Clostridium novyi (strain NT) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = -3 Query: 308 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIER-VFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVE 787 + RGLDYYT +FE I T G GGRY+ LI G K PAVG +GIER + T+ME +I + E + +G +GD + A +LV+ L +KAE ++K V + A + + +I+G+ E+ E LK ++ Q+ +S +N E Sbjct: 255 IVRGLDYYTKTVFEIINNDITVCG----GGRYNGLIEQIGGKPTPAVGFGMGIERLILTLME----NNIEIPKPKEMDIFIGSMGDNGKIEAFKLVNALRTKGLKAECDHMNKSVKAQMKYANKIDASYSMIIGDTEIEEKKANLKRMEDGQQFEVSLNNLDE 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CLOBH (Histidyl-tRNA synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 58/178 (32.58%), Postives = 91/178 (51.12%), Query Frame = -3 Query: 338 DDLEIFFQALEKSKCIDKVVF--DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 859 D+ + F+AL+ + + + D + RGLDYY+ +FE I T I AGGRYD LI G +PAVG +GIER ++ +Q++ +I + +G +GDK L +L EL + +K E + K V + A + +++GE ELN G V LK ++ Q+ Sbjct: 229 DECKDHFEALKSYLDVLDIKYKVDPFIVRGLDYYSKTVFEFIIDDIT----ICAGGRYDYLIEEIGGPSMPAVGFGMGIER---LLLTLQEKAIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDHMGKSVKAQMKYANRIGAKYSMVLGEEELNTGKVSLKRMEDGQQ 399
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CLOB1 (Histidyl-tRNA synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 58/178 (32.58%), Postives = 91/178 (51.12%), Query Frame = -3 Query: 338 DDLEIFFQALEKSKCIDKVVF--DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 859 D+ + F+AL+ + + + D + RGLDYY+ +FE I T I AGGRYD LI G +PAVG +GIER ++ +Q++ +I + +G +GDK L +L EL + +K E + K V + A + +++GE ELN G V LK ++ Q+ Sbjct: 229 DECKDHFEALKSYLDVLDIKYKVDPFIVRGLDYYSKTVFEFIIDDIT----ICAGGRYDYLIEEIGGPSMPAVGFGMGIER---LLLTLQEKAIEIPEEAYVDLYLGNMGDKAKLEVLKLAKELRDRHIKCEIDHMGKSVKAQMKYANRIGAKYSMVLGEEELNTGKVSLKRMEDGQQ 399
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CALS8 (Histidyl-tRNA synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=hisS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.181e-14 Identity = 56/199 (28.14%), Postives = 98/199 (49.25%), Query Frame = -3 Query: 290 DDLEIFFQALEKSKCIDKVVF--DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQ--IQKERNQIIRATETQVLVGLLGD-----KLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 859 D+ + F+AL+ V + D + RGLDYYT +FE + + +I GGRYDNLI G P +G ++G+ER+ ++ Q + ++ Q+ QV + LGD +A+ L E + ++ K MK D+ + VI+G+ EL +G+ K++ + T+ EEV+ + I+ ++ Sbjct: 229 DECKTHFEALKGYLDAAGVCYKVDPYIVRGLDYYTRTVFEIVDVVLDKELAICGGGRYDNLIEQIGGSSTPGIGFAIGVERLIMLLSQKGLIPQKPQV-----PQVFIATLGDLATKKAFEIASTLRFEGISTVIEELSRSLKSQMKYADKL---GCDFAVIIGDDELEKGVCKVREMKTSSEEVVRIEGLAQHIKSKI 419 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |