CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CLOTE (Histidyl-tRNA synthetase OS=Clostridium tetani GN=hisS PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.555e-24 Identity = 64/199 (32.16%), Postives = 116/199 (58.29%), Query Frame = -3 Query: 299 LENSSAKLALDDLEIFFQALEKSKCIDK-VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 889 +EN K + +LE ++ DK DL++ARGLDYYTG ++E + Q+GS+ +GGRYDNL + +++P VG+S+G+ R+F + + K + +T +Q LV +GD + + ++ ++L ++ +E Y+ K+ K A + KIP+++++GE EL E V +KN++T +E +S ++ I+ Sbjct: 240 IENDVFKEGVYELEKVVHYIKSFNVPDKNYKIDLTIARGLDYYTGTVYETVLNNYPQIGSVCSGGRYDNLAEHYTNQKLPGVGISIGLTRLFYQLRE-AKIIGENASSTLSQALVIPVGDTMEYSIKVANKLRENEIISELYLEDAKIGKKFAYADKLKIPYVILIGEDELKEEKVSVKNMETGNQESMSLEEAIKIIK 437
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CYTH3 (Histidyl-tRNA synthetase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=hisS PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.683e-23 Identity = 66/201 (32.84%), Postives = 114/201 (56.72%), Query Frame = -3 Query: 302 ENSSAKLALDDLEIFFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 886 ++S +D+LE F +EKS + + DL+LARGL YYTG IFE Q+GS+ GGRYDNL G+FG V VG+S GI+R++ +M ++ +Q + T++L+ + LP+ +L ++ N ++ Y K+ K + A + KIP+ +++GE E+N+G+ LKN+ + ++ ++ V ++ Sbjct: 258 QSSVGLKGIDELEKVFTLIEKSGLGNASIETDLTLARGLSYYTGAIFEVKILNV-QMGSVCGGGRYDNLTGVFGLPNVSGVGISFGIDRIYDVMNELNLFPSQ--ESNSTRLLICAFDENTFMHALPMVTKLRAQGINTEL---YPDPVKIKKQLSYADDKKIPFALLIGEDEMNQGLYSLKNLISGEQFKVTFDEVVHKL 452
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PYRAB (Histidyl-tRNA synthetase OS=Pyrococcus abyssi GN=hisS PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23 Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = -3 Query: 284 VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 805 + DL +ARG DYYT ++FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E K ++A V V +GD +A +V+ L A ++++ + +K+ K +D A + +IVG+R+L G+V ++++++ + + N V +++ LNQ Sbjct: 260 IQIDLGIARGFDYYTSIVFEAIVPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILE--WKGLLPELKA-GPDVFVIPVGDSRDVATAIVTRLRKAGIRSDIELSGRKLRKALDYANRIGVRLSIIVGKRDLERGVVTIRDLESGNQVEVPVDNVVTKVRELLNQ 431
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PYRKO (Histidyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=hisS PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23 Identity = 63/169 (37.28%), Postives = 98/169 (57.99%), Query Frame = -3 Query: 302 VVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 805 V DL +ARG DYYT V+FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E +R + +G + A E+ L A V+A+ + +K+ K +D A + +P++V+VG+++L G V L+++ + +++ I + VEEI Sbjct: 262 VRIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPILEWKGLLPEIKLRPDVYVIPIGDDREVKKTAIEITQGLREATVRADIELTGRKLRKALDYAGKLGVPYVVLVGKKDLEAGKVTLRDMKSGEQKSIEKERAVEEI 430
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PYRFU (Histidyl-tRNA synthetase OS=Pyrococcus furiosus GN=hisS PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.430e-22 Identity = 64/199 (32.16%), Postives = 111/199 (55.78%), Query Frame = -3 Query: 290 AKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATE--TQVLVGLLGDKL-PLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 874 AK ++ L LE + D + DL +ARG DYYT ++FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+ E +I + V V +G+++ +A + + L + +K E ++ +K+ K +D A + + +IVGE++L G+V ++++++ ++ + + VE ++ L Sbjct: 237 AKNEINRLYALIDLLEAYEVKDWIRIDLGIARGFDYYTSIVFEAIAPNDLGIGSIGGGGRYDNLIEVFGGKPTPATGFAIGIERLIPIL-----EAKGLIPEVQIAPDVYVVPIGERMKKVAIRIATSLRKSGIKTEIELMGRKLKKAMDYANKVGVKKTIIVGEKDLERGVVTVRDMESGEQNEVKIDDIVEFMKNAL 430
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PYRHO (Histidyl-tRNA synthetase OS=Pyrococcus horikoshii GN=hisS PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.174e-22 Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = -3 Query: 284 ENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME---QIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 886 ++ AK + L LE D + DL +ARG DYYT ++FEAI +GSI GGRYDNLI +FG K PA G ++GIER+ I+E I K + T +V V L D +A + +L K+K + + +K+ K +D A ++IVG+R++ G+V ++++++ ++ +S + V++++ L + Sbjct: 233 KSKKAKEEISKLYKLTDLLEWYGVKDWIRIDLGIARGFDYYTSIVFEAISPNELGIGSIGGGGRYDNLIEIFGGKPTPATGFAIGIERLLPILEWKGLIPKPQ------TGPEVFVIPLKDMEKVAINIAVKLRREKIKTDIELSGRKLGKALDYANRVGAKLVIIVGKRDVERGVVTIRDMESGEQYNVSLNEIVDKVKNLLKR 431
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PARD8 (Histidyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.071e-22 Identity = 63/185 (34.05%), Postives = 104/185 (56.22%), Query Frame = -3 Query: 308 DLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVE 856 +L+ + + + ++ DL+LARGL+YYTG IFE + Q+GSI GGRYDNL G+FG + V VG S G +R+F ++ Q+ ++ TQ+L G K + L++++ A ++ E Y K+ K + A KIP++ IVGE E+ E + LKN+ T ++ +++ +E Sbjct: 268 ELDFILERISHTSIRAELELDLTLARGLNYYTGAIFE-VKALDVQIGSITGGGRYDNLTGVFGMEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKT--TQLLFVNFGQKEEIHLLPLIAKVRKAGIRTELYPESTKMKKQMGYADAKKIPFVAIVGENEMAENKINLKNMLTGEQTLVTIEELIE 449
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FLAJ1 (Histidyl-tRNA synthetase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=hisS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.235e-22 Identity = 59/155 (38.06%), Postives = 94/155 (60.65%), Query Frame = -3 Query: 338 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 796 D++LARGL+YYTG IFE +GSI GGRYD+L G+FG K + VG+S G++R++ ++E++Q + + AT + + GDK L A++ + +L +K E Y + KV K A + IP+ V+VG++E+N LKN+ T ++ Sbjct: 309 DVTLARGLNYYTGAIFEVAAPKTVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLVLEELQL-FPETVAATSKAIFLN-FGDKEALYASKAIQKLRQENIKVELYPDNVKVGKQFQYADKRLIPFAVLVGDQEINSNSYALKNLVTGEQ 461
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_AZOPC (Histidyl-tRNA synthetase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=hisS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 9.235e-22 Identity = 63/190 (33.16%), Postives = 100/190 (52.63%), Query Frame = -3 Query: 299 LDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVHK-KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 862 L ++E F L + + FDL+LARGL+YYTG IFE +GS+ GGRYDNL +FG + VG+S G +R+F I+ Q+ N A+ TQ+L LG+K + ++ L + AE H K+ K + A ++IP++ IVG E+ E + +K++ + + I+ + Q Sbjct: 266 LQEIETIFNKLNLIPTRNTIKFDLTLARGLNYYTGTIFEVKCLNVP-IGSVLGGGRYDNLTNIFGLSNLSGVGISFGADRIFDILNQLNLYPN--TNASHTQILFVNLGEKGVDFILPVLFSLRKVGINAELYPHNTKIKKQLSYAHNNQIPFVAIVGSTEIAENKITIKDMRSCSQFSIALDKLINFFQ 452
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_NOSCE (Probable histidyl-tRNA synthetase, cytoplasmic OS=Nosema ceranae (strain BRL01) GN=NCER_101238 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.021e-20 Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = -3 Query: 299 ALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF------GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESK-------IPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 865 A+DDL ++ + KC D ++ DLSLARGLDYYTG+I E + +GS+A GGRYDNLIG T VP G S+G+ R+F+ +++ + N + + + L LL ++L ++ S LW A + E +K+ + E K I ++++V E + N+G V + ++T E VI N +Q Sbjct: 241 AVDDLCKLYEYCKIMKCSDHLIIDLSLARGLDYYTGMIIEGKYLN-KNIGSVAGGGRYDNLIGSLENSSYTNTYNVPCAGFSIGLSRIFSCIQKPKVNTNVKVFISASGKL--LLEERL----KIQSILWEANISLETFYNKR-----NNPGEHKKYCVKHGIKYLIVVKEEQYNKGFVTVIEVNTNLENVIMIDNLPSHLQ 430 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |