CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FINM2 (Histidyl-tRNA synthetase OS=Finegoldia magna (strain ATCC 29328) GN=hisS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.334e-20 Identity = 54/202 (26.73%), Postives = 117/202 (57.92%), Query Frame = -3 Query: 299 LENSSAKLALDDLEIFFQ-ALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQ---VLVGLLGDKLPLAAELVSELWNAKVKA-EYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 889 ++N +++L+ +Q L + + +LS+ RGLDYYTG +FE FK ++GSI +GGRYD+L F ++P VG+S+G+ R+F ++++ +++ +T +++ + G + A +L+++L N+ VK Y+ K+ K + A + + +++I+G+ E+ + L+N++ +E++ + +E+++ Sbjct: 236 IDNELFTCGVNELKFVYQDILSLGVNPENIKINLSITRGLDYYTGSVFETFFKDYREIGSICSGGRYDSLANNFTKSKLPGVGMSIGLTRLFYQLQEL-----NLVKGKQTNFDCIIIPMKGYE-KNAVKLMNDLRNSSVKCMSYLEDDKLKKKFNYADKLSVKYVIIIGQDEVEQNKFTLRNMENGNQELLELNEIIEKLK 431
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYHC_ENCCU (Probable histidyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU06_0620 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20 Identity = 71/202 (35.15%), Postives = 106/202 (52.48%), Query Frame = -3 Query: 284 KLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQV--PAVGVSLGIERVFTIM-EQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE--YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 871 K A+ D+E F+ C +V D+SLARGLDYYTG+I EA + G + VGS+ GGRYDNL G + V P VG S+G+ R+F+++ E+ KE + T V VG G L ++ L +A + +E Y + KIP++V+VGE E+ G V++ N T ++E++ V + NQ Sbjct: 242 KAAVHDMEELFRLCRILGCSGSLVMDISLARGLDYYTGMILEAEYVGKS-VGSVIGGGRYDNLTENLGERCVSTPCVGFSVGVSRIFSLLYEEYDKE-------SSTMVYVGASGGLFLDERLSVLRILQDANICSETFYTRRSSFESQQKYVAKKKIPFIVVVGESEIAAGSVQVINALTRKKEIVKVEQMVSYLLDPENQ 435
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_GRAFK (Histidyl-tRNA synthetase OS=Gramella forsetii (strain KT0803) GN=hisS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.067e-20 Identity = 59/185 (31.89%), Postives = 106/185 (57.30%), Query Frame = -3 Query: 338 NSSAKLALDDLEIFFQALEKSKC-IDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 883 + + + +++L+ A+E+ + K+ D++LARGL+YYTG IFE ++GSI GGRYD+L G+FG K + +G+S G++R++ ++E++ + T+VL G+K L A + V L + AE Y K+ K + A + IP++V+ GE E+N+ LK++ + ++ Sbjct: 261 SETGQKGIEELQFIQNAIEEMPLSVAKLDLDVTLARGLNYYTGAIFEVAAPENVKMGSIGGGGRYDDLTGIFGLKDMSGIGISFGLDRIYLVLEELGLFPATV--TENTKVLFINFGEKEALYAMKAVKRLREENIIAELYPDSAKMGKQMKYADKRSIPYVVLAGEEEINDKKFTLKHMKSGEQ 443
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PORGI (Histidyl-tRNA synthetase OS=Porphyromonas gingivalis GN=hisS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.618e-20 Identity = 60/180 (33.33%), Postives = 101/180 (56.11%), Query Frame = -3 Query: 329 LDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 862 +++L +E+ + +++ D+SLARGL YYTG I E A ++GSI GGRYDNL G+FG + + VG+S G +R++ +M Q+ + + T TQ+L V + L+ +L ++ E Y K+ K + A + IP++ +VGE E G V LKN+ T +++++ Sbjct: 266 IEELTYILDKVERVQLHSELMVDISLARGLSYYTGAILEVKALDA-EMGSITGGGRYDNLTGIFGLEGMSGVGISFGADRIYDVMMQLDLFPAE--KLTGTQLLFVNFSEEDADSLLPLIQKLREQGLRTELYPEPAKIKKQMSYANAANIPYVALVGENERAAGQVNLKNMLTGEQQML 442
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRMK (Histidyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=hisS PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.515e-19 Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQI--IRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + +E I I + Q LV L+ ++ +P + ++ L + E M KK+ K A ++ I ++V+ GE EL G+V +K++ Q+ +SR +Q L Q Sbjct: 290 NFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLSRLFWQL----REAGLIDGIEGSSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYAAKAGIRFVVLAGEDELARGVVAVKDLLREQQFEVSRDGLASTLQVELEQ 460
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRM5 (Histidyl-tRNA synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=hisS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.603e-19 Identity = 57/175 (32.57%), Postives = 96/175 (54.86%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQI--IRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + +E I I A+ Q LV L+ ++ +P + ++ L + E M KK+ K A ++ I ++V+ GE EL G+V +K++ Q+ +SR + L Q Sbjct: 290 NFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYEDLASHYSKSKLPGVGISIGLSRLFWQL----REAGLIDGIEASSVQALVALMDEQGMPQSLDIARRLRAGGINTEVQMEPKKIGKQFQYAAKAGIRFVVLAGEDELARGVVAVKDLLREQQFEVSRDELASTLLVELEQ 460
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METJA (Histidyl-tRNA synthetase OS=Methanocaldococcus jannaschii GN=hisS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.557e-19 Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = -3 Query: 329 DKVVFDLSLARGLDYYTGVIFEAIFK-GATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME--QIQKERNQIIRATETQVLVG---LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 811 DK +L +ARGLDYYTG++FE K GA Q I GGRYDNLI FG + PAVG + G +R+ ++ I++E II + + L+ ++ DKL A ++V EL ++ +K+ K +D A ++IVGE+ELNEG V +K++ T ++++I Sbjct: 254 DKYTINLGIARGLDYYTGMVFEIYGKKGAKQ---ICGGGRYDNLIETFGGEPTPAVGFAYGFDRIMMNIDDLDIEEESILIIPVKKDKELIKKSLIIADKLRKAGKIV-EL--------EIMGRKLRKALDYANSRGFKKVIIVGEKELNEGKVTVKDMITGEQKLI 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_NITSB (Histidyl-tRNA synthetase OS=Nitratiruptor sp. (strain SB155-2) GN=hisS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.630e-18 Identity = 57/181 (31.49%), Postives = 101/181 (55.80%), Query Frame = -3 Query: 308 FQALEKSKCIDKVVFDL--SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNA-KVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVE 841 FQ L+ + +++++ +L RGLDYYT FE + ++A GGRYDNL+ M G K PAVG ++GIER+ +++ +R E + +L + L +A ++ ++L + +V EY K + L+ A + + +I+GE E NEG+V +K+++ +E+ + NF+E Sbjct: 233 FQTLKNLLDNEGIIYEVDENLVRGLDYYTRTAFEFVSNALGAQNAVAGGGRYDNLVEMLGGKPTPAVGFAIGIERILDLIKDKPVQR-------EGYFIGVMLPEALNIAFDIATKLRQSNRVIMEYK-PKSLKALLKGADRNNAKYALIIGEDEYNEGLVWIKDLERKEEKRVDIQNFME 405
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_KORCO (Histidyl-tRNA synthetase OS=Korarchaeum cryptofilum (strain OPF8) GN=hisS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.630e-18 Identity = 48/90 (53.33%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 620 LENSSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERV 889 +EN K+ALD LE F + D++VFDLSL RGLDYYTG +FE ++GS+A GGRYD LIG++ K VPA GVSLG+ER+ Sbjct: 233 IENDKVKVALDHLEEIFSIVSD----DRLVFDLSLVRGLDYYTGPVFETSVS-EPRIGSLAGGGRYDRLIGLYSGKDVPATGVSLGVERL 317
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_NOSP7 (Histidyl-tRNA synthetase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hisS PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18 Identity = 60/203 (29.56%), Postives = 103/203 (50.74%), Query Frame = -3 Query: 287 ENSSAKLALDDLEIFFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVM-KLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLN 886 E L + +LE + + + DLS+ARGLDYYTG ++E G +GSI +GGRY+ L+G+F +++P VG+S+G+ R+ I ++ + AT QV+ V + D +P ++ L A + K+ + K A + I + VI+G E LK++ + ++ + N EE++RRL+ Sbjct: 270 ETEQLSLGISELETVIAGVRNLGVTENRFCIDLSIARGLDYYTGTVYETTLLGHEALGSICSGGRYEELVGVFLGEKMPGVGISIGLTRL--ISRLLKAGILSTLAATPAQVMVVNMQEDLMPTYLKVSQHLRQAGINVITNFDKRPLGKQFQLADKQGIQFCVIIGSEEAAAQKSSLKDLKSGEQVEVLLVNLAEEVKRRLS 470 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |