CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CAMJE (Histidyl-tRNA synthetase OS=Campylobacter jejuni GN=hisS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 53/166 (31.93%), Postives = 81/166 (48.80%), Query Frame = -3 Query: 317 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK--ERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 808 K D L RGLDYY+ FE I +IA GGRYD LI G K +G ++GIER+ TI+EQ ++ +R I ++ + L L +A L E KV Y +K+ K ++ A ++ + +GE E + KN+ +E++I S+ Sbjct: 245 KFELDSKLVRGLDYYSKTAFEFISDEIGAKAAIAGGGRYDRLIEYLGGKSGYGIGFAMGIERIITILEQKEEKIQREGIYLCAMDEIYIQKL---LHIATNLRKEY---KVLLSYEA-RKLAKHLENADKNNTEIFLCMGENEAQNESLFYKNLAKKEEKMIKISD 403
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SULDN (Histidyl-tRNA synthetase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=hisS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 44/160 (27.50%), Postives = 81/160 (50.62%), Query Frame = -3 Query: 329 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMV----HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 796 D +L RGLDYY+ FE + +IA GGRYD L+ + PAVG ++GIER+ ++ I E A + +G + D+ A +++ ++ K K++ ++ K + + A +S + ++G E+ +G + +KN++ E+ I Sbjct: 250 DTNLVRGLDYYSKTAFEFVSDNIGSQSAIAGGGRYDRLVEFLDGRPTPAVGFAMGIERLMELI--IMPE------AKKDGYYLGAMDDE---ALDMIVKIAQKKRKSDIVILEYKTKNLKNHLKAADKSNAKYCAVIGSNEIKDGTIWVKNLEDKTEKTI 398
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRATO (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=hisS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G +++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKIAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CHLFF (Histidyl-tRNA synthetase OS=Chlamydophila felis (strain Fe/C-56) GN=hisS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 50/167 (29.94%), Postives = 79/167 (47.31%), Query Frame = -3 Query: 290 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 787 L RGLDYYT V+FEAI ++ GGRYD L+ G PA G +G+ERV M+ + + N + ++ L+ + L + E HKK+ + A K ++ +VGEREL + +K++ + QE S +E+++RL Sbjct: 262 LVRGLDYYTDVVFEAITTFGGHSYALGGGGRYDGLVAASGGPSTPACGFGVGLERV---MQTLLAQGNITLPSSHKLRLIPVESQADSFCFIWAQHLRGLGIPTEIDWTHKKLKNALKTADAEKATFVCLVGERELLSEQLTIKDMSSRQE----FSGSKQEVEQRL 421
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BACCN (Histidyl-tRNA synthetase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=hisS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 46/173 (26.59%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 290 DLSLARGLDYYTGVIFEAIFK--GATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 796 D +L RGLDYY +FE + + G + +++ GGRY+ L+ G ++P +G ++ IER ++ ++ E ++ V LGDK AA++ +L + + E +++K+ A ++ ++GE EL++G++ LK++ T ++E ++ F I +L Sbjct: 253 DPNLVRGLDYYQHTVFEIMSEAEGFGAITTLSGGGRYNGLVQEIGGPEMPGIGFAMSIER---LIMALKAENIELPIENTIDCYVVALGDKAKDHAAKVAFDLRKSGLSVEKDYLNRKMKAQFKSADRLNAKYVAVLGEDELDKGVINLKDMATGEQEEVALDVFASYIAEKL 422
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_AZOVD (Histidyl-tRNA synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=hisS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = -3 Query: 335 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEYMVHK---KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 802 V + L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E +++ ++ R + V G+ LAA L L +A V+ + +A +S + +++GE EL IV LK++ E+ Sbjct: 253 VINPKLVRGLDYYGKTVFEWVTDKLGAQGTVCAGGRYDGLVEQLGGKPTPAVGFAMGVERLVLLLETLERVPAELSR--QVDVYFCAFGEAAELAALGLAERLRDALPGLRLAVNAGAGSFKSQLKKADKSGALYALVLGEDELAGRIVGLKSLRAEGEQ 410
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_VIBSL (Histidyl-tRNA synthetase OS=Vibrio splendidus (strain LGP32) GN=hisS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 45/165 (27.27%), Postives = 82/165 (49.70%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 787 L RGLDYY +FE I G++ GGRYD L+ G K AVG ++G+ER+ +ME + E ++ R+ + ++ G + +L ++L + M H K RA + +++GE E+ + V LK++ +++ +S++ E++ Sbjct: 257 LVRGLDYYNRTVFEWITDSLGAQGTVCGGGRYDGLVEQLGGKATNAVGFAMGLERLVLMMETL--ELTEVRRSVDVYMVAAGEGTMI-AGMQLANQLRDTVEGVRVMNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLVGGEQQTVSQTEVAEKV 418
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRMU (Histidyl-tRNA synthetase OS=Streptococcus mutans GN=hisS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 55/182 (30.22%), Postives = 86/182 (47.25%), Query Frame = -3 Query: 326 DDLEIFFQAL-EKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVIS 859 DD + FQ + + + +D V D ++ RGLDYY IFE I + ++ AGGRYD+L+ FG G LG+ER+ + I K++ + V + +LG A EL+ + AE + +K+ A K ++ +GE E+ G V +KN T QE +S Sbjct: 231 DDSQAHFQGVRDMLEVLDIPYVIDTNMVRGLDYYNHTIFEFITQVDKSELTLCAGGRYDSLVEYFGGPATAGFGFGLGLERLLLV---IDKQKINLPVDNSLDVYIAVLGAAANSTALELIQAIRKQGFSAERDYLSRKIKAQFKSADVFKTKLIMTLGESEVETGQVAVKNNFTRQEIAVS 409
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_RHOPT (Histidyl-tRNA synthetase OS=Rhodopseudomonas palustris (strain TIE-1) GN=hisS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 57/192 (29.69%), Postives = 94/192 (48.96%), Query Frame = -3 Query: 353 NSSAKLALDDLEIFFQALEKSKC-IDKVVFDLSLARGLDYYTGVIFEAIF-------KGA-TQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAE-YMVHKK-----VMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 883 NS+ + DL + E S ++ D ++ RGL+YYTG +FE KG + GS+ GGRYD L+ F + VPA G S+G+ R+ + I + N + V+V + G ++ ++V+ L A ++AE Y+ + K MK D+ P +I G E +GIV++K++ Sbjct: 276 NSTFSAGIQDLRQITKITEASGYDTGRIRVDNTVVRGLEYYTGPVFEVELLLDTKDEKGRPVRFGSVGGGGRYDGLVSRFRGEPVPATGFSIGVSRLQAALTLIGQLGN---KPQAGPVVVTVFGGEIAGYQKMVATLRKAGIRAELYLGNPKHSLGQQMKYADKRNS---PCAIIQGSDEKQQGIVQIKDL 461
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_RHILW (Histidyl-tRNA synthetase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=hisS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11 Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = -3 Query: 353 DKVVFDLSLARGLDYYTGVIFEAIF-------KGATQV-GSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK-ERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 811 D++ D S+ RGL+YYTG ++EA KG V GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K +++I V+ G + + + ++ +L A ++AE KK + A P +I G E G+V++K++ Sbjct: 292 DRIKIDPSIVRGLEYYTGPVYEAELSFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLGKLGASEVIEPVLVTVMDGDV-EAMGRYQKMTQDLRAAGIRAEMFQGNWKKFGNQLKYADRRGCPVAIIQGGDERATGVVQIKDL 454 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |