CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_AERS4 (Histidyl-tRNA synthetase OS=Aeromonas salmonicida (strain A449) GN=hisS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.930e-11 Identity = 49/155 (31.61%), Postives = 77/155 (49.68%), Query Frame = -3 Query: 335 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 787 L RGLDYY +FE + G++ AGGRYD L+ G + PAVG ++G+ER+ ++E + E N IR V + ++G+ A +L L +A M H K + RA +S +I+GE E+ G + +K + E+ Sbjct: 257 LVRGLDYYNLTVFEWVTTSLGAQGTVCAGGRYDGLVEQLGGQATPAVGFAMGMERLVLMLETL--ELNADIRPA-VDVYLAMVGEGSEQAGFQLAERLRDALPDLRLMSHCGGGNFKKQLKRADKSGAAIALILGETEVQNGEITIKYLRGQAEQ 408
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_TREPS (Histidyl-tRNA synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/174 (25.29%), Postives = 86/174 (49.43%), Query Frame = -3 Query: 290 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERE--LNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 802 VFD S+ RG DYYTG++ E +GS+ +GGRYD+L ++ V VG S+G++R++ +Q+ R + Q L+ L + + + +V E + +K+ + A + I W + V +R + + ++ L+++ T ++ + E++RR+ Sbjct: 272 VFDPSITRGFDYYTGMVCETFLTQLPHIGSVCSGGRYDHLTALYMKDAVSGVGASIGLDRLYAAFQQLGMSREHV---CFVQALIFCQDSALMDVYQKLCSYFAVQVATEVFPDPRKLSQQYAFAEKKGIRWGIFVEQRNAVVEDCLLVLRDLSTRKDTRLP----AHEVRRRM 438
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_TREPA (Histidyl-tRNA synthetase OS=Treponema pallidum GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/174 (25.29%), Postives = 86/174 (49.43%), Query Frame = -3 Query: 290 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERE--LNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 802 VFD S+ RG DYYTG++ E +GS+ +GGRYD+L ++ V VG S+G++R++ +Q+ R + Q L+ L + + + +V E + +K+ + A + I W + V +R + + ++ L+++ T ++ + E++RR+ Sbjct: 272 VFDPSITRGFDYYTGMVCETFLTQLPHIGSVCSGGRYDHLTALYMKDAVSGVGASIGLDRLYAAFQQLGMSREHV---CFVQALIFCQDSALMDVYQKLCSYFAVQVATEVFPDPRKLSQQYAFAEKKGIRWGIFVEQRNAVVEDCLLVLRDLSTRKDTRLP----AHEVRRRM 438
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STACT (Histidyl-tRNA synthetase OS=Staphylococcus carnosus (strain TM300) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 51/201 (25.37%), Postives = 98/201 (48.76%), Query Frame = -3 Query: 293 SSAKLALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAA---GGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLP-LAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRR 880 + K LDDL I + V D +L RGLDYYT FE + G+I GGRY+ L+ + + +G +L IER+ +E+ E +I + + +G+K A L+++L + +KA+ + +K+ + +A + +++GE+EL +G + +K++D+ + + I ++ V + + Sbjct: 236 NQVKQYLDDLNIPY------------VEDPNLVRGLDYYTHTAFELMIDSPDYDGAITTLCGGGRYNGLLELLDGPKQTGIGFALSIERLLLALEE---EGIEIEEDEHLDLFIVTMGEKADRYAVNLLNDLRHHGIKADKDYLKRKIKGQMKQANRVGAEYTIVIGEQELEDGNIDIKHMDSGETDSIHLADLVSYFENK 421
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRATW (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G ++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRATT (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. tularensis GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G ++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRATN (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G ++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRATM (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G ++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRATF (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G ++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_FRAT1 (Histidyl-tRNA synthetase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=hisS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 44/153 (28.76%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 335 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 790 +L RGLDYYTG++FE +I AGGRYD L+ G ++ A+G ++G+ER+ ++E + K NQ +L L L + + EL K+ + + +A +S +I+G+ EL+ G +K + +E+ Sbjct: 256 NLVRGLDYYTGLVFEWTTDKLGSQSAICAGGRYDGLVENLGGQKTAAIGFAIGMERLLLLLEDLGKLPNQDNACDVFFILDSAQLHQSLAIVENIRQELPQLKIDMD-LKFGSFKSQFKKADKSGAKVAIIIGQDELDNGFAGIKFLQQNEEQ 407 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |