CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_VIBVU (Histidyl-tRNA synthetase OS=Vibrio vulnificus GN=hisS PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 46/165 (27.88%), Postives = 78/165 (47.27%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 787 L RGLDYY +FE I + G++ GGRYD L+ G K PAVG ++G+ER+ ++E + E + R+ + V+ G + +L ++ A M H K RA + +++GE E+ + V LK++ ++ S+ +I Sbjct: 257 LVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKATPAVGFAMGLERLVLMLETL--ELTDVRRSVDVYVVTAGEGTMM-AGMKLAEQVREAIPGVRVMNHFGGGNFKKQFKRADKVGAVVALVLGENEVADNTVVLKDLAGGEQVTYSQQEIASKI 418
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THISH (Histidyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 54/180 (30.00%), Postives = 81/180 (45.00%), Query Frame = -3 Query: 290 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME------QIQKERNQIIRATETQVLVGL-----LGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTT--QEEVISRSNFVEEIQRRL 790 +L RGLDYY +FE I + G++ AGGRYD L+ G + PA G ++G+ER+ ++E K + A E GL L D LP LV KA+ I RA S +I+GE EL EG + +K + +++ + R E ++ R+ Sbjct: 255 ALVRGLDYYCRTVFEWITESLGAQGTVCAGGRYDGLVEQLGGRATPAAGFAMGLERLLALVEAGGARPPAPKPHAYLALAGEGTQAEGLRLAESLRDALP-GLRLVVNGGGGGFKAQ----------IKRADRSGADLALIIGESELAEGTILVKPLREAGGEQQAVPRDGLAEFLRARI 423
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SYNP6 (Histidyl-tRNA synthetase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 49/165 (29.70%), Postives = 80/165 (48.48%), Query Frame = -3 Query: 305 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG----LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEE 787 L RGLDYYT FE I ++ GGRYD L+ G + PAVG ++G+ER+ +++Q Q + AT LV G L LA +L S + ++ K K DR S +++G+ E +G V LK + + +++ + +S +++ Sbjct: 256 LVRGLDYYTHTAFEIISSDLGAQATVCGGGRYDGLVSQLGGPETPAVGWAMGLERLVLLLQQGQ----AVPPATLDFYLVSRGAIAEGQALILAQKLRSAGFGVELDLSGSAFGKQFKRADR---SGAIACLVLGDAEAEQGQVNLKWLQSGEQQTLDQSELLQD 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SYNE7 (Histidyl-tRNA synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 49/165 (29.70%), Postives = 80/165 (48.48%), Query Frame = -3 Query: 305 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVG----LLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEE 787 L RGLDYYT FE I ++ GGRYD L+ G + PAVG ++G+ER+ +++Q Q + AT LV G L LA +L S + ++ K K DR S +++G+ E +G V LK + + +++ + +S +++ Sbjct: 256 LVRGLDYYTHTAFEIISSDLGAQATVCGGGRYDGLVSQLGGPETPAVGWAMGLERLVLLLQQGQ----AVPPATLDFYLVSRGAIAEGQALILAQKLRSAGFGVELDLSGSAFGKQFKRADR---SGAIACLVLGDAEAEQGQVNLKWLQSGEQQTLDQSELLQD 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_RICFE (Histidyl-tRNA synthetase OS=Rickettsia felis GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 52/191 (27.23%), Postives = 91/191 (47.64%), Query Frame = -3 Query: 296 DDLEIFFQALEKSKCI--DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTK-QVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQR 859 D+ + +F+ L K I K V + L RGLDYY FE K +I AGGRYD L + G VPA+G + GIER+ + +E N I + ++ + + + A E+V +L + K+ K I R +++ +G+ E +KLK+++ +E ++ + +E +++ Sbjct: 231 DESKEYFEELIKYLDILGVKYVINPRLVRGLDYYCHTAFEFTTKKLGSQSTILAGGRYDGLAKIMGNNDDVPAIGFAAGIERI-----ALMREYN--ISEVKPVFVLPIGENNICYALEIVDKLRLQNISTIIDPVGKIAKRIQRVLNENAKFIIFIGDEEQANNSLKLKDLEKKEEYIVDFAKVLELLKK 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_RHIL3 (Histidyl-tRNA synthetase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 50/164 (30.49%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 353 DKVVFDLSLARGLDYYTGVIFEAIF-------KGATQV-GSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQK-ERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMV--HKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 811 D++ D S+ RGL+YYTG ++EA KG V GS+ GGRYD L+ F + VPA G S+G+ R+ T ++ + K +++I V+ G + + + ++ EL A ++AE KK + A P +I G E +V++K++ Sbjct: 292 DRIKIDPSVVRGLEYYTGPVYEAELTFDVTNEKGEKVVFGSVGGGGRYDGLVSRFMGQPVPATGFSIGVSRLMTALKNLGKLGASEVIEPVLVTVMDGDV-EAMGRYQKMTQELRAAGIRAEMFQGNWKKFGNQLKYADRRGCPVAIIQGGDERATSVVQIKDL 454
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PSEFS (Histidyl-tRNA synthetase OS=Pseudomonas fluorescens (strain SBW25) GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 47/155 (30.32%), Postives = 78/155 (50.32%), Query Frame = -3 Query: 359 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSEL-------WNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLK 802 V + L RGLDYY+ +FE + + G++ AGGRYD L+ G K VG ++GIER+ ++E +++ +I R + V + G+ LAA +SE ++ A K K +A +S + +I+GE EL + ++ K Sbjct: 253 VINPKLVRGLDYYSKTVFEWVTEKLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIERLILLLETLEQVPEEISR--QVDVYLCAFGEAAELAALALSEKVRDQLPNLRLQINAGAGSFKSQFK---KADKSGALYALILGEDELAQQVIGFK 402
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_MYCGE (Histidyl-tRNA synthetase OS=Mycoplasma genitalium GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = -3 Query: 332 SLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSEL-WNAKVKAEY---MVHKKVMKL---IDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEV 790 +L RGLDYYTG +FE + T I AGG YDNL+ + PA+G + GIER+ +E +K I+ Q+LV + L E + EL W AK+ EY ++ KV+K+ I A ++ IVG+ + ++ + +KN+ + Q+ + Sbjct: 255 NLVRGLDYYTGFVFEYVKNQDT----ILAGGVYDNLVEELSSNPTPALGFACGIERLINCLEIDKKA--FILNTKPKQMLV------ICLFEEALEELVWLAKLWREYNQVTIYPKVIKVDNGIRLANRLGYTFIGIVGKTDFDKKAITIKNLVSKQQTI 402
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METLZ (Histidyl-tRNA synthetase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 52/173 (30.06%), Postives = 82/173 (47.40%), Query Frame = -3 Query: 302 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDR--------ARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 796 + +ARGLDYYTG++FE I GG Y L +FG K VP+ G +G +RV + +I + ++ T ++P A S L +A + A VM L+DR A +S + V++GE+E G++ LK++ T + +S N +E I Sbjct: 248 NFGIARGLDYYTGMVFEGFADNLGAENQILGGGVY-RLAHLFGGKDVPSCGFGIGFDRVLVSLGEITPQTIPVVAVICTP------ETRIP-AYNAASALRSAGITA-------VMDLLDRGFGAQLSSALKSGASFAVVIGEKEAAAGMITLKDLATAVQTEMSIDNAIEVI 405
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_COREF (Histidyl-tRNA synthetase OS=Corynebacterium efficiens GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 47/167 (28.14%), Postives = 79/167 (47.31%), Query Frame = -3 Query: 290 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMK-LIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 787 + RGLDYYT FE I G I GGRYD L+ G + + +G LG++R +E Q R V +G K A ++++L A + A+ + +K + A S + +++GE EL+ G V +K++ ++ I+ S V ++ +L Sbjct: 264 MVRGLDYYTKTTFEFIHDGLGAQSGIGGGGRYDGLMAQLGGQDLSGIGYGLGVDRTILALEAEGVTVGQERRVDVYGVPLGQAAKK--AMAGIINDLRAAGISADMSYGDRGLKGAMKGADRSGSLYTLVLGENELDNGTVAVKDMRAHDQQDIALSEVVSALRAKL 428 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |