CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BLOFL (Histidyl-tRNA synthetase OS=Blochmannia floridanus GN=hisS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11 Identity = 50/173 (28.90%), Postives = 87/173 (50.29%), Query Frame = -3 Query: 287 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGL--LGDKLPLAAELVSELWNAKVK-AEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLN 787 L RGLDYY +FE + +I AGGRYD+LI G +PAVG ++G+ERV +M+ I ++ II + V L LG + +SE K+ MV + IDRA ++ ++++V ++ E + LK + + ++E++ + ++++ N Sbjct: 263 LVRGLDYYNRTVFEWVTDKLGVKKTICAGGRYDDLIKQLGGGSIPAVGFAIGLERVVLLMKLI---KSSIINTRNVYIDVYLIRLGTYYQEYSIKLSEHIREKLPFLRLMVDCGGGNFKQQIDRAEKNNSRFVIVVDDKNFFEQTIILKELQSKKQEILKYDEIILKLRKIYN 432
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_METFK (Histidyl-tRNA synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=hisS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 53/173 (30.64%), Postives = 86/173 (49.71%), Query Frame = -3 Query: 302 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVL-VGLLGDK--LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRSNFVEEI 808 K + L RGLDYY +FE + G+IA GGRYD+L+ G K+ PA G +G+ERVF +M + E + + ++ VG +K LP+A L + + A K MK +A +S + +I+G+ E+ V LK + + ++ +S S +E + Sbjct: 251 KWTLNTRLVRGLDYYNRTVFEWVTNKLGSQGTIAGGGRYDSLVQSLGGKETPACGFGIGLERVFLLMRECGIE---AFHSPDVYLVNVGDAANKAALPIAEALRDSGLSVSLHAGGGSFKSQMK---KADQSGAQYALILGDDEIAANEVCLKPLRENGEQRRMSLSQAIEAL 417
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_LACPL (Histidyl-tRNA synthetase OS=Lactobacillus plantarum GN=hisS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFE------AIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQV---LVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 D ++ RGLDYY IFE A+ KG T +I AGGRY+ L+ G +V VG LG+ER+ +M + I T+ Q+ +VG+ +LV L A KAE + +K A + + VGE EL + +V LK + T +E ++ ++ ++ + L++ Sbjct: 254 DATMVRGLDYYNHTIFEIMTHSKALGKGYT---TICAGGRYNGLVKELGGPEVSGVGFGLGVERLLVLM-----DAENIAVPTDDQLDVYVVGIGDTASATTLKLVQALRAAGYKAERDYLDRKPKAQFKSADRLNARYTMTVGETELADQVVNLKAMATGEETKVAMADIYQDAHQVLDK 426
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_EHRRW (Histidyl-tRNA synthetase OS=Ehrlichia ruminantium (strain Welgevonden) GN=hisS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 42/171 (24.56%), Postives = 83/171 (48.54%), Query Frame = -3 Query: 290 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 802 V + ++ RGLDYY +FE S+ AGGRYD L+ G PA+G + G+ER+ +++ K+ +I VL+ + D + A +L EL + + ++ + + + ++I G+ EL VK+K++ T ++ ++ + ++ + R+ Sbjct: 250 VINHNIVRGLDYYCKTVFEFTTSELGSQNSVIAGGRYDGLVKSMGGHSTPAIGFAAGVERLSALIDYEHKKPKRI-------VLIPIGDDAISYAIKLAYELRCKGIHVCWNNYRGTSLKNELRKANDTDIVLIFGDEELQSNTVKVKDMKTGDQQNVAVCDLLDNLLYRI 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CHRSD (Histidyl-tRNA synthetase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hisS PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.616e-11 Identity = 49/176 (27.84%), Postives = 84/176 (47.73%), Query Frame = -3 Query: 290 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSE-LWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRSNFVEEIQRRL 802 V + L RGLDYY+ +FE + G++ AGGRYD L+ G K P VG ++G+ER+ ++E + + V + +GD A L+ E L +A + VH I +A +S +++G+ E+ G V +K + + ++E ++R +Q L Sbjct: 252 VINPRLVRGLDYYSRTVFEWTTQALGSQGTVCAGGRYDGLVEQLGGKPTPGVGFAMGVERLILLLETLDLVPE--AARSRPDVYLTAMGDTASREAMLLGEHLRDALPEMHLQVHCGGGSFKSQIKKADKSGARIALMLGDDEIASGSVGIKFLREDREQESVAREALAARLQALL 425
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SYNWW (Histidyl-tRNA synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 42/170 (24.71%), Postives = 84/170 (49.41%), Query Frame = -3 Query: 299 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEYMVHKKVMKL-IDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 802 + D +L RGLDYY+ FE G ++ GGRYD L+ G +P +G +LG+ER+ ++ + K + V V ++ D + +LV+EL ++A+ + K + A ++ ++V+VGE E+ + L+++ + ++ + + + I+ Sbjct: 250 IHDNNLVRGLDYYSNTAFEIHLPGIGAQSAVGGGGRYDGLVKELGGPDIPGIGFALGMERLLLALDMLGKSK---FSNPSLDVFVVVMNDAYEMQGLQLVNELRRRGIRADKDYGGRSGKAQMKYAGKTAARFVVMVGEEEVEKHFWTLRDMQSKEQWQLGQEELISSIR 416
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRU0 (Histidyl-tRNA synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 53/175 (30.29%), Postives = 81/175 (46.29%), Query Frame = -3 Query: 296 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVIS----RSNFVEEIQR 802 V D ++ RGLDYY IFE + K +I AGGRYD L+ F + P G LG+ER+ I+E K+ + V + +LG+ A LV + AE + +K+ A ++ +GE E+ G V +KN T +E +S SNF +++ Sbjct: 252 VIDTNMVRGLDYYNHTIFEFMAKVEGSDLTICAGGRYDGLVSYFDGPETPGFGFGLGLERLLLILE---KQGITLPIEEPMDVYLAVLGEAANSKALALVQAIRKQGFTAERDYLGRKIKAQFKSADSFNAKTIITLGESEVETGKVIIKNNQTREEMEVSLEEITSNFATIMEK 423
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SALG2 (Histidyl-tRNA synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 41/170 (24.12%), Postives = 83/170 (48.82%), Query Frame = -3 Query: 290 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHK----KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 787 L RGLDYY +FE + G++ AGGRYD L+ G + PAVG ++G+ER+ +++ + E I + + + G + AA ++E ++ ++ K RA + +++GE E+ +G V +K++ + ++ +++ + ++ L Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPE---FIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGGNFKKQFARADKWDARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLRTLL 423
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ORITB (Histidyl-tRNA synthetase OS=Orientia tsutsugamushi (strain Boryong) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 51/184 (27.72%), Postives = 85/184 (46.20%), Query Frame = -3 Query: 299 CIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVG---SIAAGGRYDNLIGMF------GTKQVPAVGVSLGIER--VFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQ 817 C K + +L RGLDYY +FE + +TQ+G ++ GGRYD L G K +PA+G + GIER + T + II E G++ L+ +L N + + + K ++RA K ++ +G E+ E ++K++DT+ E VI + + +Q Sbjct: 248 CGIKYTINANLVRGLDYYCHTVFEYV---STQIGAQSTVLGGGRYDGLFEQMGGKLASGKKMLPAIGFAAGIERLALLTNYTPVDVRPIVIIPVDEEYHQHGII---------LLQKLRNNNITTVIDLQDSISKRLNRANHIKASKVIFIGAIEMREQSYRIKDLDTSNECVIIHNELLSYLQ 419
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_LACJO (Histidyl-tRNA synthetase OS=Lactobacillus johnsonii GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 49/180 (27.22%), Postives = 88/180 (48.89%), Query Frame = -3 Query: 299 VFDLSLARGLDYYTGVIFEAIFKGAT---QVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERN-QIIRATETQVLVGLLGDKLPL-AAELVSELWNAKVKAEYMV-HKKVMKLIDRARESKIPWMVIVGERELNEGIVKL------KNIDTTQEEVISRSNFVEEIQ 802 V D L RGLDYYTG+IFE + + +I GGRY++L+ F + PAVG +G ER+ ++ KE+N + + + +G A E+ L A+Y V KK+ + +A +++ +G +EL G++ + K ID + E++ + + + +++ Sbjct: 252 VMDDDLVRGLDYYTGIIFEFMVEDKNLWESATTILGGGRYNHLVEEFDGPETPAVGFGIGEERLMLVL----KEQNPDLFQEEGIDFFITNIGAGTEFKAVEVARSLREQGFSAQYDVDQKKLKQQFRKADRVHATFVITLGAKELENGVLNIKRLSDGKTIDLSLEDINNMQDVINKLE 427 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |