CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_HALWD (Histidyl-tRNA synthetase OS=Haloquadratum walsbyi (strain DSM 16790) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = -3 Query: 329 LSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 793 L+ ARGLDYYTGV+FE S+ GGRYDNLI FG + PAVGV+ G+ + + ++ + + T + +GD +A + EL K E + + + A ++IVGER+L + +K++++ + + Sbjct: 264 LTTARGLDYYTGVVFECFDATGEVSRSVFGGGRYDNLIESFGGQPTPAVGVAPGLAPLSLLCQRAGVWPTEEL---TTDYYILTVGDTRSVATRIARELRVNKNTVEIDIADRSFGAQMGYADSINAETVIIVGERDLENDEITIKDMNSGDQTTV 416
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_EHRRG (Histidyl-tRNA synthetase OS=Ehrlichia ruminantium (strain Gardel) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 42/171 (24.56%), Postives = 82/171 (47.95%), Query Frame = -3 Query: 290 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 802 V + ++ RGLDYY +FE S+ AGGRYD L+ G PA+G + G+ER+ +++ K+ +I VL+ + D A +L EL + + ++ + + + ++I G+ EL VK+K++ T ++ ++ + ++ + R+ Sbjct: 250 VINHNIVRGLDYYCKTVFEFTTSELGSQNSVIAGGRYDGLVKSMGGHSTPAIGFAAGVERLSALIDYEHKKPKRI-------VLIPIGDDATSYAIKLAYELRCKGIHVCWNNYRGTSLKNELRKANDTDIVLIFGDEELQSNTVKVKDMKTGDQQNVAVCDLLDNLLHRI 413
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_DESOH (Histidyl-tRNA synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = -3 Query: 329 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-----ELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVI 796 D L RGLDYYT FE +IA GGRYD+L+ + G PAVG ++G+ER ++E + E + ++ + LG++ A EL ++ ++ E K MK D+ S + +IVG+ E+ G + L+N+ T ++ I Sbjct: 251 DKRLVRGLDYYTRTTFEVQTDRLGAQSAIAGGGRYDDLVKLLGGPDQPAVGFAVGLER---LVELVAMEET-VSDVAHLRLFIAALGERARRRAFGWMCELNRRGFDVEMSLEERGLKSQMKTADKWNASHV---LIVGDAEMETGSLILRNMKTKAQQEI 404
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CHLAB (Histidyl-tRNA synthetase OS=Chlamydophila abortus GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 55/193 (28.50%), Postives = 90/193 (46.63%), Query Frame = -3 Query: 290 DDLEIFFQALEKSKCIDKVVFDLS--LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 859 DD + F + L ++ + +D++ L RGLDYYT ++FEAI ++ GGRYD LI G PA G +G+ERV ++ + + N ++ L+ + L + + E HKK+ + A K ++ VGEREL + +KN+ QE S +E+++RL Sbjct: 237 DDRKYFDEILSALDALN-IAYDINPRLVRGLDYYTDLVFEAITTCRDHSYALGGGGRYDGLIASSGGPATPACGFGIGLERV---IQTLLAQGNFTPLSSHKLRLIPVESQADSFCFVWAQHLRSLGIPTEVDWTHKKLKNALKIADAEKATFVCPVGERELVSEQLTVKNMSLRQE----FSGSKQEVEQRL 421
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_BACSU (Histidyl-tRNA synthetase OS=Bacillus subtilis GN=hisS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 47/166 (28.31%), Postives = 81/166 (48.80%), Query Frame = -3 Query: 311 DLSLARGLDYYTGVIFEAIF--KGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKL-PLAAELVSELWNAKVKAEYMVHKKVMK-LIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFV 796 D +L RGLDYY FE + +G + ++A GGRYD L+ G + P +G ++ IER ++ I E+ ++ + LG+K + LV +L A + +E K MK A K ++ I+GE EL + + +K+ T ++ ++ F+ Sbjct: 253 DPNLVRGLDYYNHTAFEIMSNAEGFGAITTLAGGGRYDGLVEQIGGPEAPGIGFAMSIER---LLAAIDAEKRELPVDKGIDCYIVTLGEKAKDYSVSLVYKLREAGISSEIDYENKKMKGQFKTADRLKARFIAILGEDELAQNKINVKDAQTGEQIEVALDEFI 415
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_VESOH (Histidyl-tRNA synthetase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 47/153 (30.72%), Postives = 75/153 (49.02%), Query Frame = -3 Query: 359 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLK 802 V + SL RGLDYY +FE +I AGGRYD LI G PAVG+++G+ER+ ++E +N I + + + G K + +A L EL N + + ++A ++K + +I+GE+ELN + +K Sbjct: 251 VINTSLVRGLDYYNRTVFEWTTTDLGTQSTICAGGRYDGLIEKMGGTPTPAVGLAIGLERLVLLLE----AQNLISTKSTLSIYLIAFGKKEQIKSIQIANVLHDELPNV-ILYNDLTLGSFKSQFEKADKAKANFALILGEQELNNNQISIK 398
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_THIDA (Histidyl-tRNA synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 58/195 (29.74%), Postives = 91/195 (46.67%), Query Frame = -3 Query: 335 NSSAKLALDDLEI----FFQALEKSKCIDKVVFDLS--LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVH------KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 883 N+ A LD+LE F AL+ + + F+++ L RGLDYY +FE + G++ AGGRYD L+ G K PA G ++GIER+ ++E K I+ A +V A + + L A + ++H K MK +A S+ + VI+G+ E V +K + T E+ Sbjct: 218 NAEAPRLLDELEDEALNHFDALQGLLRANGIAFEINPRLVRGLDYYNRTVFEWVTDQLGAQGTVCAGGRYDGLVEQLGGKPAPAAGFAMGIERLLALVETSGK---PIVPAVPDAYIVHAGDTADAFAWQAAATLRGAGLAV--VLHCGGGSFKSQMK---KADASRARYAVIIGDEEAAAQQVSVKPLRGTAEQ 404
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRSY (Histidyl-tRNA synthetase OS=Streptococcus suis (strain 05ZYH33) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = -3 Query: 338 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 796 D ++ RGLDYY IFE + + +I AGGRYD L+ FG + PA G +GIER+ ++E K+ ++ T+ V + +LG + A +LV + +AE + +K+ A ++ +G E+ G V +KN T + Sbjct: 254 DTNMVRGLDYYNHTIFEFMTEVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVLE---KQGIELPLDTQLDVYIAVLGQEANGGALDLVQAIRKQGFRAERDYLDRKLKAQFKSADVFGAKAIITLGGSEIESGQVVVKNNQTRSQ 405
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_STRS2 (Histidyl-tRNA synthetase OS=Streptococcus suis (strain 98HAH33) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = -3 Query: 338 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEY-MVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQE 796 D ++ RGLDYY IFE + + +I AGGRYD L+ FG + PA G +GIER+ ++E K+ ++ T+ V + +LG + A +LV + +AE + +K+ A ++ +G E+ G V +KN T + Sbjct: 254 DTNMVRGLDYYNHTIFEFMTEVGGNDLTICAGGRYDGLVTYFGGPETPAFGFGMGIERLILVLE---KQGIELPLDTQLDVYIAVLGQEANGGALDLVQAIRKQGFRAERDYLDRKLKAQFKSADVFGAKAIITLGGSEIESGQVVVKNNQTRSQ 405
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SALTY (Histidyl-tRNA synthetase OS=Salmonella typhimurium GN=hisS PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 41/170 (24.12%), Postives = 83/170 (48.82%), Query Frame = -3 Query: 290 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHK----KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 787 L RGLDYY +FE + G++ AGGRYD L+ G + PAVG ++G+ER+ +++ + E I + + + G + AA ++E ++ ++ K RA + +++GE E+ +G V +K++ + ++ +++ + ++ L Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPE---FIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGGNFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLRTLL 423 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |