CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SALCH (Histidyl-tRNA synthetase OS=Salmonella choleraesuis GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 41/170 (24.12%), Postives = 83/170 (48.82%), Query Frame = -3 Query: 290 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHK----KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 787 L RGLDYY +FE + G++ AGGRYD L+ G + PAVG ++G+ER+ +++ + E I + + + G + AA ++E ++ ++ K RA + +++GE E+ +G V +K++ + ++ +++ + ++ L Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPE---FIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGGNFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLRTLL 423
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SALA4 (Histidyl-tRNA synthetase OS=Salmonella agona (strain SL483) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 41/170 (24.12%), Postives = 83/170 (48.82%), Query Frame = -3 Query: 290 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHK----KVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 787 L RGLDYY +FE + G++ AGGRYD L+ G + PAVG ++G+ER+ +++ + E I + + + G + AA ++E ++ ++ K RA + +++GE E+ +G V +K++ + ++ +++ + ++ L Sbjct: 257 LVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPE---FIASPVVDIYLVAAGAQTQSAAMTLAERLRDEMPGVKLMTNHGGGNFKKQFARADKWGARIALVLGESEVADGTVVVKDLRSGEQTAVAQDSVAAHLRTLL 423
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PSEU2 (Histidyl-tRNA synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = -3 Query: 359 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSE-------LWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLK 802 V + L RGLDYY+ +FE + G++ AGGRYD L+ G K VG ++GIER+ ++E +++ +I R + V + G+ LAA ++E +V A K K +A +S + +I+GE EL ++ +K Sbjct: 253 VINPKLVRGLDYYSKTVFEWVTDQLGAQGTVCAGGRYDGLVEQMGGKPTAGVGFAMGIERLVLLLETLEQVPEEIAR--QVDVYLCAFGEAAELAALALTEKVRDQLPTLRLQVNAGAGSFKSQFK---KADKSGALYALILGEEELAAKVIGVK 402
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PSESM (Histidyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 48/155 (30.97%), Postives = 77/155 (49.68%), Query Frame = -3 Query: 359 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSEL-------WNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLK 802 V + L RGLDYY+ +FE + G++ AGGRYD L+ G K VG ++GIER+ ++E +++ +I R + V + G+ LAA ++E +V A K K +A +S + +I+GE EL I+ +K Sbjct: 253 VINPKLVRGLDYYSKTVFEWVTDQLGAQGTVCAGGRYDGLVEQMGGKPTAGVGFAMGIERLVLLLETLEQVPEEIAR--QVDVYLCAFGEAAELAALALTEQVRDRLPNLRLQVNAGAGSFKSQFK---KADKSGALYALILGEEELAAKIIGVK 402
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PSEPF (Histidyl-tRNA synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 48/155 (30.97%), Postives = 80/155 (51.61%), Query Frame = -3 Query: 359 VFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAK--VKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLK 802 V + L RGLDYY+ +FE + G++ AGGRYD L+ G K P VG ++GIER+ ++E +++ +I R + V + G++ L LA + +L N + V A K K +A +S + +I+G+ E+ + +V K Sbjct: 253 VLNPKLVRGLDYYSKTVFEWVTDKLGAQGTVCAGGRYDGLVEQMGGKPTPGVGFAMGIERLVLLLETLEQIPEEISR--QVDVYLCAFGEEAELAGLALAERVRDQLPNLRLQVNAGAGSFKSQFK---KADKSGALYALILGDDEMAQQVVGFK 402
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_PROMA (Histidyl-tRNA synthetase OS=Prochlorococcus marinus GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 46/176 (26.14%), Postives = 83/176 (47.16%), Query Frame = -3 Query: 335 FQALEKSKCIDKVVFDLS--LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIM-----EQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEE 841 F++L+K K+ F ++ L RGLDYY FE I ++ GGRYD L+ G PA+G ++G+ER+ ++ +I + I + + + LL +L L + + EL ++ K RA W +++G+ E+N+G ++LK + ++ Sbjct: 235 FESLQKVLNTLKIPFSVNQRLVRGLDYYCHTAFEIISDDLGAQATVCGGGRYDGLVEQLGGPHAPAIGFAVGMERLLILIGDRLANEIHPDVYLINKGEKAEAEALLLARQLRL-QDFIVELDDSGA--------AFAKQFKRANRVGATWAIVIGDEEINKGEIRLKRMKVLNKD 401
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_LEIXX (Histidyl-tRNA synthetase OS=Leifsonia xyli subsp. xyli GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = -3 Query: 605 ALDDLEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIME 865 A+ +LE AL ++ FD L RG+ YYTGVIFE G+ S+ GGRYD +IG F +VPA G S+G ERV ++E Sbjct: 266 AIGELETLAHALGALPTGVRLRFDPKLVRGMGYYTGVIFEIAHPGSGS--SVGGGGRYDGMIGRFLGTEVPACGFSIGFERVVDLIE 350
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_HAEIN (Histidyl-tRNA synthetase OS=Haemophilus influenzae GN=hisS PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 43/168 (25.60%), Postives = 81/168 (48.21%), Query Frame = -3 Query: 299 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAA-ELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNID-TTQEEVISRSNFVEEIQ 787 L RGLDYY +FE + G++ GGRYD L+ G P++G ++G+ER+ +++++ + + + V G+ LAA EL ++ + M+H K RA +S +++GE E+ V +K++ T ++ + N ++ +Q Sbjct: 256 LVRGLDYYNKTVFEWVTSALGAQGTVCGGGRYDGLVEQLGGHATPSIGFAMGLERLVLLVQEVNP---NVPAKSAVDIYVVYQGEGATLAAFELAEKVRSELPHLNTMLHCSSGNFKKQFKRADKSGATLALVIGESEVQNKQVVVKHLQGGTDQQTLDLVNIIDYLQ 420
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_ERWT9 (Histidyl-tRNA synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 45/161 (27.95%), Postives = 86/161 (53.42%), Query Frame = -3 Query: 317 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSE-LWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 787 L RGLDYY +FE + G++ AGGRYD L+ G + PAVG ++G+ER+ +++ + E + +R + V+ GD + AA L++E L +A + + M + K RA + +++GE E+ + +K++ +++ +++S+ Sbjct: 257 LVRGLDYYNRTVFEWVTDSLGAQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPE-FEPMRVVDVYVIAS--GDGVQSAAMLLAERLRDALPELKLMTNFGGGNFKKQFARADKWGARIALVLGEDEVANKQLVIKDLRNGEQQTLAQSD 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CYAA5 (Histidyl-tRNA synthetase OS=Cyanothece sp. (strain ATCC 51142) GN=hisS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.579e-11 Identity = 45/168 (26.79%), Postives = 77/168 (45.83%), Query Frame = -3 Query: 284 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 787 L RGLDYYT FE I ++ GGRYD L+ G PAVG ++G+ER+ +++Q+Q + G L LA +L E ++ K K DR S +++GE E V+LK + + +++ ++++ + ++ + Q Sbjct: 256 LVRGLDYYTHTAFEMISDDLGAQATVCGGGRYDGLVEELGGNPTPAVGWAIGMERLIILLKQLQSSPDMTPDIYIVSRGEAAEGQGLILAQKLRKEGLTVELDMSGSAFGKQFKRADR---SGAIACIVLGEEEATNKTVQLKWLQSKEQQAMTQAELLTKVGELIEQ 420 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |