CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANAC (Histidyl-tRNA synthetase OS=Xanthomonas axonopodis pv. citri GN=hisS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18 Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRYD+L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + +L A ++ L + E M KK+ K A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q Sbjct: 295 NFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYDSLASHYTKSKLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRLDDALDIARRLRIGGINTEVQMEPKKIGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_WOLPP (Histidyl-tRNA synthetase OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=hisS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18 Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 787 L RGLDYY +FE + + G++ AGGRYDNL+ G K PA+G + GIER+ ++ +K+ I ++ + G+ A L SEL + Y + + +A ++ ++I G+ EL+ +K+KN+DT +E++I+R VE I Sbjct: 253 LVRGLDYYCHTVFEFVTEDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIERIMELINYAEKKERPI-------YIIPIGGEAEEHALTLASELRRNGLYVIYEYSGTLKTRMKKANQANAKVVLIFGDEELSSKTLKIKNMDTGEEKMIARDKTVENI 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEDO (Histidyl-tRNA synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=hisS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18 Identity = 61/167 (36.53%), Postives = 89/167 (53.29%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRSNFVEEI 787 L RGLDYY +FE + G++ AGGRYD L+G G K PAVG ++G+ER+ ++E + NQ I A E V V +GD L A ++ EL A + M H V K + RA +S + +I+GE EL V +K + + Q+E+++R E I Sbjct: 257 LVRGLDYYNRTVFEWVTTSLGSQGTVLAGGRYDGLVGQLGGKDTPAVGFAMGLERIVLLLETL--GLNQDI-APEVDVYVTAMGDSCLVEAFKVAQELRQALPGLKVMSHCGGGNVKKQMKRADKSGAAYAIIIGENELANNQVAIKPLRNNNQQELVARDALAETI 420
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANCP (Histidyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris GN=hisS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17 Identity = 57/175 (32.57%), Postives = 94/175 (53.71%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQV--LVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F + +E I E+ V +V L+ + +L A ++ L + E M KKV K A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q Sbjct: 295 NFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLFWQL----REAGLIAGIAESSVHAMVALMDESRLDDALDIARRLRIGGINTEVQMEPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANC8 (Histidyl-tRNA synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hisS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17 Identity = 57/175 (32.57%), Postives = 94/175 (53.71%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQV--LVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY+NL + ++P VG+S+G+ R+F + +E I E+ V +V L+ + +L A ++ L + E M KKV K A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q Sbjct: 295 NFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLFWQL----REAGLIAGIAESSVHAMVALMDESRLDDALDIARRLRIGGINTEVQMEPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_WOLSU (Histidyl-tRNA synthetase OS=Wolinella succinogenes GN=hisS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17 Identity = 53/169 (31.36%), Postives = 90/169 (53.25%), Query Frame = -3 Query: 353 LEIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 853 L LE + K+ F S+ARGL YYTG+++E +GS+ +GGRYDNL F +++ VG S+G++R+ +E++ R T QVLV + + +L + ++ L +K+E Y K + + A P++ ++GE EL +G+V LK++ Sbjct: 259 LYAILDTLEMDRACYKINF--SIARGLGYYTGIVYETTLDALPSIGSVCSGGRYDNLTQSFSKERMSGVGASIGVDRLLAALEELGLLEG---RGTSAQVLVACMEESQLAYSYKVAERLRTLGIKSEVYPEAVKPKRSLAYANSKGHPYVAVIGEDELKQGVVTLKDM 422
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_CLOAB (Histidyl-tRNA synthetase OS=Clostridium acetobutylicum GN=hisS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17 Identity = 56/198 (28.28%), Postives = 106/198 (53.54%), Query Frame = -3 Query: 302 LENSSAKLALDDLEIFFQALEKSKCID-KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELW-NAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 889 ++N + ++++E + L+ D + +L + RGLDYYTG +FE + G GSI +GGRYDNL + +P VG+S+GI R+F ++ +I N E ++V +GD +++++L N K Y K+ K + A + I +++++GE E+ + +K++ T +++ ++ +EEI Sbjct: 238 IKNEMLEKGIEEVEEVIKYLKLFGVEDSEYAINLKIIRGLDYYTGTVFETLLTGNESYGSICSGGRYDNLAQNYTENVLPGVGMSIGITRLFFVLREIGFIENYNSSLNEKYLIVP-IGDTFEYCTKILNKLLVNGKSAEIYFEEGKLKKKLTYANKLDIKYVILIGEDEVTNKELVIKDMITGEQKKLN----IEEI 430
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_XANC5 (Histidyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hisS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.802e-17 Identity = 55/173 (31.79%), Postives = 93/173 (53.76%), Query Frame = -3 Query: 284 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGD-KLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRLNQ 796 + S+ARGLDYYTG ++E Q+GSI +GGRY++L + ++P VG+S+G+ R+F + + Q I + Q +V L+ + +L A ++ L + E M KKV K A + I ++V+ G+ EL G+V +K++ Q+ ++R +Q L Q Sbjct: 299 NFSIARGLDYYTGTVYETTLTDHPQIGSICSGGRYESLASHYTKSKLPGVGISIGLTRLFWQLR--EAGLIQGIAESSVQAMVALMDETRLDDALDIARRLRIGGINTEVQMEPKKVGKQFQYAARAGIRFVVLAGDDELARGVVAVKDLVREQQFDVARDELASTLQVELEQ 469
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_WOLPM (Histidyl-tRNA synthetase OS=Wolbachia pipientis wMel GN=hisS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.802e-17 Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 787 L RGLDYY +FE + + G++ AGGRYDNL+ G K PA+G + GIER+ ++ KE I + +G +K L L +EL + Y + + +A ++ +I G+ EL+ +K+KN+DT +E++I+R N +E I Sbjct: 253 LVRGLDYYCHTVFEFVTEDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIERIMELINYSPKEERPIY-----LIPIGREAEKHALT--LANELRRNGLYVIYEYSGTLRTRMKKANQANAKAALIFGDEELSSKTLKIKNMDTGEEKIIARDNTIENI 407
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_HELHP (Histidyl-tRNA synthetase OS=Helicobacter hepaticus GN=hisS PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.354e-17 Identity = 56/181 (30.94%), Postives = 99/181 (54.70%), Query Frame = -3 Query: 353 NSSAKLALDDLEIFFQALEKSKCI-DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLA-AELVSELWN-AKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 883 N S K ++DL++ ++ L + D + S+ARGL YYTG+++E +GS+ +GGRYDNL F +++ VG S+GI+R+ +E+++ + RAT + L+ + D+L A L++E + +++ E Y K+ K A ++V++GE E N + LKN+ Sbjct: 245 NDSIKKGIEDLKMLYEVLSSLQMDRDTYRVNFSIARGLGYYTGIVYETTLNALKSIGSVCSGGRYDNLTRTFSKEKMSGVGASIGIDRLLAALEELELLQK---RATSARALIVCM-DRLYFGYAHLLAESFRCSEIPIEVYPEASKLKKQFTYAHLKGYEFVVVIGENEFNTKTLTLKNM 421 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |