CV884405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEB9 (Histidyl-tRNA synthetase OS=Shewanella baltica (strain OS195) GN=hisS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = -3 Query: 320 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRS 808 K + L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E ++ ++ +E V V +GD + +A EL S L N KV + + V K + RA +S +++GE EL EG+V +K++ + +++ ++RS Sbjct: 250 KYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELNKD---IPSEVDVYVTAMGDSCLVEAIKIAQELRSALPNLKVMS-HCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARS 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEB8 (Histidyl-tRNA synthetase OS=Shewanella baltica (strain OS185) GN=hisS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = -3 Query: 320 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRS 808 K + L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E ++ ++ +E V V +GD + +A EL S L N KV + + V K + RA +S +++GE EL EG+V +K++ + +++ ++RS Sbjct: 250 KYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELNKD---IPSEVDVYVTAMGDSCLVEAIKIAQELRSALPNLKVMS-HCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARS 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEB5 (Histidyl-tRNA synthetase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=hisS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = -3 Query: 320 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRS 808 K + L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E ++ ++ +E V V +GD + +A EL S L N KV + + V K + RA +S +++GE EL EG+V +K++ + +++ ++RS Sbjct: 250 KYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELNKD---IPSEVDVYVTAMGDSCLVEAIKIAQELRSALPNLKVMS-HCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARS 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEB2 (Histidyl-tRNA synthetase OS=Shewanella baltica (strain OS223) GN=hisS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 56/169 (33.14%), Postives = 93/169 (55.03%), Query Frame = -3 Query: 320 KVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-----LPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRS 808 K + L RGLDYY +FE + G++ AGGRYD L+ G K PAVG ++G+ER+ ++E ++ ++ +E V V +GD + +A EL S L N KV + + V K + RA +S +++GE EL EG+V +K++ + +++ ++RS Sbjct: 250 KYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELNKD---IPSEVDVYVTAMGDSCLVEAIKIAQELRSALPNLKVMS-HCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARS 414
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_RHOBA (Histidyl-tRNA synthetase OS=Rhodopirellula baltica GN=hisS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17 Identity = 62/196 (31.63%), Postives = 101/196 (51.53%), Query Frame = -3 Query: 317 NSSAKLALDDL-EIFFQALEKSKCIDKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV-----GLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSN 883 N +A ++ L +I+ AL D++ D+S+ARGLDYYTGVIFE +GS+ +GGRYDNL G++ + +P +G SLG++R+ +E + + + V V G D L LA S+L +A + E Y KK+ + + A +I G E G V++K + T + + ++ S+ Sbjct: 239 NETAAAGIERLTQIYRGALASGVSPDRLKIDVSIARGLDYYTGVIFETTLDELPGIGSVCSGGRYDNLAGLYTKQHLPGIGASLGLDRLLAALESLGRLSGV---SKPCAVFVPFFDKGHRDDYLKLA----SQLRDAGIGVEVYPEPKKLGQQLKYADSQGFAVAIIAGGNEWEAGAVQVKTLATKESQDVAYSH 427
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_TREDE (Histidyl-tRNA synthetase OS=Treponema denticola GN=hisS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17 Identity = 57/185 (30.81%), Postives = 96/185 (51.89%), Query Frame = -3 Query: 287 DKVVFDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLV-GLLGDKLPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGI--------VKLKNIDTTQEEVISRSNFVEEIQRRLN 811 D +VFD S+ RGLDYYTGV+FE +GS+ +GGRYDNL ++ + + VG S+G++R+ +E + ++ +A+ T +L+ L D L L+ ++V+ K+ AE Y KK+ A + I W + + + E +KLK++ E+ S V++I+ N Sbjct: 267 DSIVFDPSITRGLDYYTGVVFETFLNDLPSIGSVCSGGRYDNLTALYMKECITGVGASIGLDRLLAALELLGHQKT---KASFTDLLIFSLPEDDLVLSYKIVNFFEAEKINAEVYPEPKKMNHQYTYAEKKDIRWGLFLDKDSCVEEFDKAPQRFKIKLKDMTNRTEDETPLSEAVKKIRASKN 448
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_SHEAM (Histidyl-tRNA synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=hisS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17 Identity = 55/168 (32.74%), Postives = 88/168 (52.38%), Query Frame = -3 Query: 299 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAEYMVH---KKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI-DTTQEEVISRSNFVEEIQ 787 L RGLDYY +FE + G++ AGGRYD L+G G K PAVG ++G+ER+ ++E ++ ++ V V +GD +P A + +EL A M H K I RA +S +I+G+ EL EG V +K + + ++++++R E I+ Sbjct: 257 LVRGLDYYNRTVFEWVTDSLGAQGTVLAGGRYDGLVGQLGGKDTPAVGFAMGLERIVLLLETLELAKDV---PAAVDVYVTAMGDSCVPAAFAIANELRVALPGVRIMTHCGGGNFKKQIKRADKSGAALALIIGDNELAEGKVAIKPLRNDNEQQLVAREALAETIK 421
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_HELPS (Histidyl-tRNA synthetase OS=Helicobacter pylori (strain Shi470) GN=hisS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17 Identity = 53/180 (29.44%), Postives = 92/180 (51.11%), Query Frame = -3 Query: 353 NSSAKLALDDLEIFFQALEKSKCIDKVV-FDLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK-LPLAAELVSELWNAKVKAE-YMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNI 883 N + K + DLE +Q L + + D S+ARGL YYTG+++E G +GS+ +GGRYD+L F + + VG S+GI+R+ + ++Q R+T+ +VL+ + ++ A L L + + +E Y +K+ K A ++ ++GE E + LKN+ Sbjct: 241 NENLKKGIQDLERLYQLLGDLQISQNLYKIDFSIARGLGYYTGIVYETTLNGMKSLGSVCSGGRYDHLTQNFSKENLQGVGASIGIDRLIVALSEMQLLDE---RSTQAKVLIACMHEEYFSYANRLAESLRQSGIFSEVYPEAQKIKKPFSYANHKGHEFVAVIGEEEFKSETLSLKNM 417
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_GLOVI (Histidyl-tRNA synthetase OS=Gloeobacter violaceus GN=hisS PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.244e-17 Identity = 68/179 (37.99%), Postives = 97/179 (54.19%), Query Frame = -3 Query: 290 DLSLARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMF--GTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDK--LPLAAELVSELWNAKVKAEYMVHKK------VMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEIQRRL 796 DL+LARGLDYYTG IFE + A +VGS+ AGGRYD LI G +PA G S G++R+ M+Q+ + + RA E VLV GD + ELV L A V+AE H++ + + + A E + VIVG E+ +G L+++ T ++E I + + I RL Sbjct: 292 DLALARGLDYYTGTIFETV--SAAKVGSVGAGGRYDRLIYDLSGGKADLPACGTSFGLDRILAAMDQLGLFAS-LRRAGE--VLVLHFGDPGVSQVCFELVRGLREAGVRAELGYHEEPFTPNGMRQQLGYANEKGFAYAVIVGPDEMAQGQAALRDLTTRRQEKIPLATAGQLIAGRL 465
BLAST of CV884405 vs. ExPASy Swiss-Prot
Match: SYH_WOLWR (Histidyl-tRNA synthetase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=hisS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17 Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = -3 Query: 302 LARGLDYYTGVIFEAIFKGATQVGSIAAGGRYDNLIGMFGTKQVPAVGVSLGIERVFTIMEQIQKERNQIIRATETQVLVGLLGDKLPLAAELVSELWNAKVKAEYMVHKKVMKLIDRARESKIPWMVIVGERELNEGIVKLKNIDTTQEEVISRSNFVEEI 787 L RGLDYY +FE + + G++ AGGRYDNL+ G K PA+G + GIER+ ++ KE I + +G +K L L +EL + Y + + +A ++ +I G+ EL+ +K+KN++T +E++I+R N +E I Sbjct: 253 LVRGLDYYCHTVFEFVTEDLGAQGAVFAGGRYDNLVSSVGGKHTPAIGFAGGIERIMELINYSPKEERPIY-----LIPIGREAEKHALT--LANELRRNGLYVIYEYSGTLRTRMKKANQANAKAALIFGDEELSSKTLKIKNMNTGEEKIIARDNTIENI 407 The following BLAST results are available for this feature:
BLAST of CV884405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 401
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884405 ID=CV884405; Name=CV884405; organism=Citrus sinensis; type=EST; length=891bpback to top |